tools/CMakeLists.txt

   1 #=========================================================
   2 INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
   3 #=========================================================
   4 #Add your ggo files to this list if they are used by vv
   5 FOREACH(clitkTool clitkAffineTransform clitkBinarizeImage clitkImageArithm
   6         clitkMedianImageFilter clitkImageConvert clitkCropImage clitkResampleImage clitkMIP)
   7     WRAP_GGO(${clitkTool}_GGO_C ${clitkTool}.ggo)
   8     SET(GGO_C_FILES ${GGO_C_FILES} ${${clitkTool}_GGO_C})
   9 ENDFOREACH(clitkTool)
  10 ADD_LIBRARY(clitkToolsGgoLib ${GGO_C_FILES})
  11
  12 #=========================================================
  13 #the libraries avoid recompilation for vv, and should be used for generic filters
  14 #with long compilation times that are used by vv
  15 ADD_LIBRARY(clitkImageConvertLib clitkImageConvertGenericFilter.cxx)
  16 ADD_LIBRARY(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx)
  17 ADD_LIBRARY(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx)
  18 ADD_LIBRARY(clitkResampleImageLib clitkResampleImageGenericFilter.cxx)
  19 ADD_LIBRARY(clitkMIPLib clitkMIPGenericFilter.cxx)
  20
  21 TARGET_LINK_LIBRARIES(clitkBinarizeImageLib clitkToolsGgoLib)
  22
  23 IF (CLITK_BUILD_TOOLS)
  24     WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
  25     ADD_EXECUTABLE(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
  26     TARGET_LINK_LIBRARIES(clitkDicomInfo clitkCommon ITKIO)
  27
  28     WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
  29     ADD_EXECUTABLE(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
  30     TARGET_LINK_LIBRARIES(clitkDicom2Image clitkCommon ITKIO)
  31
  32     WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
  33     ADD_EXECUTABLE(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
  34     TARGET_LINK_LIBRARIES(clitkImageInfo clitkCommon ITKIO)
  35
  36     ADD_EXECUTABLE(clitkImageConvert clitkImageConvert.cxx ${clitkImageConvert_GGO_C})
  37     TARGET_LINK_LIBRARIES(clitkImageConvert clitkImageConvertLib clitkCommon ITKIO)
  38
  39     ADD_EXECUTABLE(clitkBinarizeImage clitkBinarizeImage.cxx
  40        ${clitkBinarizeImage_GGO_C})
  41     TARGET_LINK_LIBRARIES(clitkBinarizeImage clitkBinarizeImageLib clitkCommon ITKIO)
  42
  43     WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo)
  44     ADD_EXECUTABLE(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
  45     TARGET_LINK_LIBRARIES(clitkVFResample clitkCommon ITKIO)
  46
  47     WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
  48     ADD_EXECUTABLE(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
  49     TARGET_LINK_LIBRARIES(clitkImageCreate clitkCommon  ITKIO)
  50
  51     WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
  52     ADD_EXECUTABLE(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
  53     TARGET_LINK_LIBRARIES(clitkZeroVF clitkCommon  ITKIO)
  54
  55     WRAP_GGO(clitkImageExtractLine_GGO_C clitkImageExtractLine.ggo)
  56     ADD_EXECUTABLE(clitkImageExtractLine clitkImageExtractLine.cxx ${clitkImageExtractLine_GGO_C})
  57     TARGET_LINK_LIBRARIES(clitkImageExtractLine clitkCommon  ITKIO)
  58
  59     WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
  60     ADD_EXECUTABLE(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
  61     TARGET_LINK_LIBRARIES(clitkSplitImage clitkCommon ITKIO )
  62
  63     WRAP_GGO(clitkVFMerge_GGO_C clitkVFMerge.ggo)
  64     ADD_EXECUTABLE(clitkVFMerge clitkVFMerge.cxx ${clitkVFMerge_GGO_C})
  65     TARGET_LINK_LIBRARIES(clitkVFMerge ITKBasicFilters clitkCommon ITKIO)
  66
  67     WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
  68     ADD_EXECUTABLE(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
  69     TARGET_LINK_LIBRARIES(clitkWriteDicomSeries clitkCommon ITKIO )
  70
  71     WRAP_GGO(clitkAverageTemporalDimension_GGO_C clitkAverageTemporalDimension.ggo)
  72     ADD_EXECUTABLE(clitkAverageTemporalDimension clitkAverageTemporalDimension.cxx ${clitkAverageTemporalDimension_GGO_C})
  73     TARGET_LINK_LIBRARIES(clitkAverageTemporalDimension clitkCommon ITKIO )
  74
  75     WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
  76     ADD_EXECUTABLE(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
  77         ${clitkMedianTemporalDimension_GGO_C})
  78     TARGET_LINK_LIBRARIES(clitkMedianTemporalDimension clitkCommon ITKIO )
  79
  80     WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
  81     ADD_EXECUTABLE(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
  82     TARGET_LINK_LIBRARIES(clitkWarpImage ITKBasicFilters clitkCommon ITKIO)
  83
  84     WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
  85     ADD_EXECUTABLE(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
  86     TARGET_LINK_LIBRARIES(clitkInvertVF clitkCommon ITKIO )
  87
  88     ADD_EXECUTABLE(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
  89     TARGET_LINK_LIBRARIES(clitkAffineTransform clitkCommon ITKIO )
  90
  91     WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
  92     ADD_EXECUTABLE(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
  93     TARGET_LINK_LIBRARIES(clitkSetBackground clitkCommon ITKIO)
  94
  95     WRAP_GGO(clitkGuerreroVentilation_GGO_C clitkGuerreroVentilation.ggo)
  96     ADD_EXECUTABLE(clitkGuerreroVentilation clitkGuerreroVentilation.cxx clitkGuerreroVentilationGenericFilter.cxx ${clitkGuerreroVentilation_GGO_C})
  97     TARGET_LINK_LIBRARIES(clitkGuerreroVentilation clitkCommon ITKIO)
  98
  99     WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
 100     ADD_EXECUTABLE(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
 101     TARGET_LINK_LIBRARIES(clitkGammaIndex vtkCommon vtkFiltering vtkGraphics vtkIO vtkImaging)
 102
 103     ADD_EXECUTABLE(clitkImageArithm clitkImageArithm.cxx ${clitkImageArithm_GGO_C})
 104     TARGET_LINK_LIBRARIES(clitkImageArithm clitkImageArithmImageLib clitkCommon ITKIO )
 105
 106     WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
 107     ADD_EXECUTABLE(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
 108     TARGET_LINK_LIBRARIES(clitkUnsharpMask clitkCommon ITKIO )
 109
 110     WRAP_GGO(clitkFooImage_GGO_C clitkFooImage.ggo)
 111     ADD_EXECUTABLE(clitkFooImage clitkFooImage.cxx ${clitkFooImage_GGO_C})
 112     TARGET_LINK_LIBRARIES(clitkFooImage clitkCommon ITKIO )
 113
 114     ADD_EXECUTABLE(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
 115     TARGET_LINK_LIBRARIES(clitkMedianImageFilter clitkCommon ITKIO ITKBasicFilters )
 116
 117     #WRAP_GGO(clitkResampleImage_GGO_C clitkResampleImage.ggo)
 118     ADD_EXECUTABLE(clitkResampleImage clitkResampleImage.cxx ${clitkResampleImage_GGO_C})
 119     TARGET_LINK_LIBRARIES(clitkResampleImage clitkResampleImageLib clitkCommon ITKIO)
 120
 121     WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
 122     ADD_EXECUTABLE(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
 123     TARGET_LINK_LIBRARIES(clitkMinMaxMask clitkCommon ITKIO  )
 124
 125     # WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
 126     # ADD_EXECUTABLE(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
 127     # TARGET_LINK_LIBRARIES(clitkAutoCrop clitkCommon ITKIO )
 128
 129     WRAP_GGO(clitkDicomRTStruct2BinaryImage_GGO_C clitkDicomRTStruct2BinaryImage.ggo)
 130     ADD_EXECUTABLE(clitkDicomRTStruct2BinaryImage clitkDicomRTStruct2BinaryImage.cxx ${clitkDicomRTStruct2BinaryImage_GGO_C})
 131     TARGET_LINK_LIBRARIES(clitkDicomRTStruct2BinaryImage ITKCommon clitkDicomRTStruct clitkCommon ITKIO )
 132
 133     WRAP_GGO(clitkImageLog_GGO_C clitkImageLog.ggo)
 134     ADD_EXECUTABLE(clitkImageLog clitkImageLog.cxx ${clitkImageLog_GGO_C})
 135     TARGET_LINK_LIBRARIES(clitkImageLog  ITKIO clitkCommon)
 136
 137     WRAP_GGO(clitkFilter_GGO_C clitkFilter.ggo)
 138     ADD_EXECUTABLE(clitkFilter clitkFilter.cxx clitkFilterGenericFilter.cxx ${clitkFilter_GGO_C})
 139     TARGET_LINK_LIBRARIES(clitkFilter ITKIO clitkCommon)
 140
 141     WRAP_GGO(clitkConeBeamProjectImage_GGO_C clitkConeBeamProjectImage.ggo)
 142     ADD_EXECUTABLE(clitkConeBeamProjectImage clitkConeBeamProjectImage.cxx clitkConeBeamProjectImageGenericFilter.cxx ${clitkConeBeamProjectImage_GGO_C})
 143     TARGET_LINK_LIBRARIES(clitkConeBeamProjectImage  ITKIO clitkCommon )
 144
 145     WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
 146     ADD_EXECUTABLE(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
 147     TARGET_LINK_LIBRARIES(clitkComposeVF ITKBasicFilters ITKIO clitkCommon)
 148
 149     WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
 150     ADD_EXECUTABLE(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
 151     TARGET_LINK_LIBRARIES(clitkMergeSequence ITKIO clitkCommon)
 152
 153     WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
 154     ADD_EXECUTABLE(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
 155     TARGET_LINK_LIBRARIES(clitkBackProjectImage ITKIO clitkCommon )
 156
 157     ADD_EXECUTABLE(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
 158     TARGET_LINK_LIBRARIES(clitkCropImage clitkCommon ITKIO)
 159
 160     # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
 161     # ADD_EXECUTABLE(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
 162     # TARGET_LINK_LIBRARIES(clitkExtractSlice clitkCommon ITKIO)
 163
 164     WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
 165     ADD_EXECUTABLE(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
 166     TARGET_LINK_LIBRARIES(clitkFlipImage clitkCommon ITKIO)
 167
 168     WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
 169     ADD_EXECUTABLE(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
 170     TARGET_LINK_LIBRARIES(clitkMirrorPadImage clitkCommon ITKIO)
 171
 172     WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
 173     ADD_EXECUTABLE(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
 174     TARGET_LINK_LIBRARIES(clitkImageMoment clitkCommon ITKIO)
 175
 176     WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
 177     ADD_EXECUTABLE(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
 178     TARGET_LINK_LIBRARIES(clitkImageStatistics clitkCommon ITKIO ITKStatistics)
 179
 180     WRAP_GGO(clitkSetOrigin_GGO_C clitkSetOrigin.ggo)
 181     ADD_EXECUTABLE(clitkSetOrigin clitkSetOrigin.cxx clitkSetOriginGenericFilter.cxx ${clitkSetOrigin_GGO_C})
 182     TARGET_LINK_LIBRARIES(clitkSetOrigin clitkCommon ITKIO )
 183
 184     WRAP_GGO(clitkGetOrigin_GGO_C clitkGetOrigin.ggo)
 185     ADD_EXECUTABLE(clitkGetOrigin clitkGetOrigin.cxx clitkGetOriginGenericFilter.cxx ${clitkGetOrigin_GGO_C})
 186     TARGET_LINK_LIBRARIES(clitkGetOrigin clitkCommon ITKIO )
 187
 188     WRAP_GGO(clitkGetDirection_GGO_C clitkGetDirection.ggo)
 189     ADD_EXECUTABLE(clitkGetDirection clitkGetDirection.cxx clitkGetDirectionGenericFilter.cxx ${clitkGetDirection_GGO_C})
 190     TARGET_LINK_LIBRARIES(clitkGetDirection clitkCommon ITKIO)
 191
 192     WRAP_GGO(clitkSetDirection_GGO_C clitkSetDirection.ggo)
 193     ADD_EXECUTABLE(clitkSetDirection clitkSetDirection.cxx clitkSetDirectionGenericFilter.cxx ${clitkSetDirection_GGO_C})
 194     TARGET_LINK_LIBRARIES(clitkSetDirection clitkCommon ITKIO)
 195
 196     WRAP_GGO(clitkGetSize_GGO_C clitkGetSize.ggo)
 197     ADD_EXECUTABLE(clitkGetSize  clitkGetSize.cxx clitkGetSizeGenericFilter.cxx ${clitkGetSize_GGO_C})
 198     TARGET_LINK_LIBRARIES(clitkGetSize  clitkCommon   ITKIO)
 199
 200     WRAP_GGO(clitkGetSpacing_GGO_C clitkGetSpacing.ggo)
 201     ADD_EXECUTABLE(clitkGetSpacing  clitkGetSpacing.cxx clitkGetSpacingGenericFilter.cxx ${clitkGetSpacing_GGO_C})
 202     TARGET_LINK_LIBRARIES(clitkGetSpacing  clitkCommon   ITKIO)
 203
 204     WRAP_GGO(clitkSetSpacing_GGO_C clitkSetSpacing.ggo)
 205     ADD_EXECUTABLE(clitkSetSpacing  clitkSetSpacing.cxx clitkSetSpacingGenericFilter.cxx ${clitkSetSpacing_GGO_C})
 206     TARGET_LINK_LIBRARIES(clitkSetSpacing  clitkCommon   ITKIO)
 207
 208     WRAP_GGO(clitkCombineImage_GGO_C clitkCombineImage.ggo)
 209     ADD_EXECUTABLE(clitkCombineImage clitkCombineImage.cxx clitkCombineImageGenericFilter.cxx ${clitkCombineImage_GGO_C})
 210     TARGET_LINK_LIBRARIES(clitkCombineImage clitkCommon ITKIO)
 211
 212     WRAP_GGO(clitkPermuteAxes_GGO_C clitkPermuteAxes.ggo)
 213     ADD_EXECUTABLE(clitkPermuteAxes clitkPermuteAxes.cxx clitkPermuteAxesGenericFilter.cxx ${clitkPermuteAxes_GGO_C})
 214     TARGET_LINK_LIBRARIES(clitkPermuteAxes clitkCommon ITKIO)
 215
 216     WRAP_GGO(clitkChangeImageOrientation_GGO_C clitkChangeImageOrientation.ggo)
 217     ADD_EXECUTABLE(clitkChangeImageOrientation clitkChangeImageOrientation.cxx clitkChangeImageOrientationGenericFilter.cxx ${clitkChangeImageOrientation_GGO_C})
 218     TARGET_LINK_LIBRARIES(clitkChangeImageOrientation clitkCommon ITKIO)
 219
 220     WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
 221     ADD_EXECUTABLE(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
 222     TARGET_LINK_LIBRARIES(clitkVFConvert ITKBasicFilters ITKIO clitkCommon )
 223
 224     WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
 225     ADD_EXECUTABLE(clitkImageToVectorImage  clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
 226     TARGET_LINK_LIBRARIES(clitkImageToVectorImage  clitkCommon   ITKIO)
 227
 228     WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
 229     ADD_EXECUTABLE(clitkVectorImageToImage  clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
 230     TARGET_LINK_LIBRARIES(clitkVectorImageToImage  clitkCommon   ITKIO)
 231
 232     WRAP_GGO(clitkBSplineCoefficientsToValues_GGO_C clitkBSplineCoefficientsToValues.ggo)
 233     ADD_EXECUTABLE(clitkBSplineCoefficientsToValues  clitkBSplineCoefficientsToValues.cxx clitkBSplineCoefficientsToValuesGenericFilter.cxx ${clitkBSplineCoefficientsToValues_GGO_C})
 234     TARGET_LINK_LIBRARIES(clitkBSplineCoefficientsToValues  clitkCommon   ITKIO)
 235
 236     WRAP_GGO(clitkValuesToBSplineCoefficients_GGO_C clitkValuesToBSplineCoefficients.ggo)
 237     ADD_EXECUTABLE(clitkValuesToBSplineCoefficients  clitkValuesToBSplineCoefficients.cxx clitkValuesToBSplineCoefficientsGenericFilter.cxx ${clitkValuesToBSplineCoefficients_GGO_C})
 238     TARGET_LINK_LIBRARIES(clitkValuesToBSplineCoefficients clitkCommon ITKIO)
 239
 240     ADD_EXECUTABLE(clitkMIP  clitkMIP.cxx clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
 241     TARGET_LINK_LIBRARIES(clitkMIP clitkCommon ITKIO)
 242
 243     WRAP_GGO(clitkRelativePosition_GGO_C clitkRelativePosition.ggo)
 244     ADD_EXECUTABLE(clitkRelativePosition  clitkRelativePosition.cxx ${clitkRelativePosition_GGO_C})
 245     TARGET_LINK_LIBRARIES(clitkRelativePosition clitkCommon ITKIO)
 246
 247     WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
 248     ADD_EXECUTABLE(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
 249     TARGET_LINK_LIBRARIES(clitkTransformLandmarks clitkCommon ITKIO)
 250
 251 ENDIF(CLITK_BUILD_TOOLS)