tools/CMakeLists.txt

   1 #=========================================================
   2 INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
   3 #=========================================================
   4 #Add your ggo files to this list if they are used by vv
   5 FOREACH(clitkTool clitkAffineTransform clitkBinarizeImage clitkImageArithm
   6         clitkMedianImageFilter clitkImageConvert clitkImageResample clitkCropImage
   7         clitkMIP)
   8     WRAP_GGO(${clitkTool}_GGO_C ${clitkTool}.ggo)
   9     SET(GGO_C_FILES ${GGO_C_FILES} ${${clitkTool}_GGO_C})
  10 ENDFOREACH(clitkTool)
  11 ADD_LIBRARY(clitkToolsGgoLib ${GGO_C_FILES})
  12
  13 #=========================================================
  14 #the libraries avoid recompilation for vv, and should be used for generic filters
  15 #with long compilation times that are used by vv
  16 ADD_LIBRARY(clitkImageConvertLib clitkImageConvertGenericFilter.cxx)
  17 ADD_LIBRARY(clitkImageResampleLib clitkImageResampleGenericFilter.cxx)
  18 ADD_LIBRARY(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx)
  19 ADD_LIBRARY(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx)
  20 ADD_LIBRARY(clitkMIPLib clitkMIPGenericFilter.cxx)
  21
  22 TARGET_LINK_LIBRARIES(clitkBinarizeImageLib clitkToolsGgoLib)
  23
  24 IF (CLITK_BUILD_TOOLS)
  25     WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
  26     ADD_EXECUTABLE(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
  27     TARGET_LINK_LIBRARIES(clitkDicomInfo clitkCommon ITKIO)
  28
  29     WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
  30     ADD_EXECUTABLE(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
  31     TARGET_LINK_LIBRARIES(clitkDicom2Image clitkCommon ITKIO)
  32
  33     WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
  34     ADD_EXECUTABLE(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
  35     TARGET_LINK_LIBRARIES(clitkImageInfo clitkCommon ITKIO)
  36
  37     ADD_EXECUTABLE(clitkImageConvert clitkImageConvert.cxx ${clitkImageConvert_GGO_C})
  38     TARGET_LINK_LIBRARIES(clitkImageConvert clitkImageConvertLib clitkCommon ITKIO)
  39
  40     ADD_EXECUTABLE(clitkBinarizeImage clitkBinarizeImage.cxx
  41        ${clitkBinarizeImage_GGO_C})
  42     TARGET_LINK_LIBRARIES(clitkBinarizeImage clitkBinarizeImageLib clitkCommon ITKIO)
  43
  44     # ADD_EXECUTABLE(clitkImageResample clitkImageResample.cxx
  45     # ${clitkImageResample_GGO_C})
  46     # TARGET_LINK_LIBRARIES(clitkImageResample clitkImageResampleLib clitkCommon ITKIO )
  47
  48     WRAP_GGO(clitkVFResample_GGO_C clitkImageResample.ggo)
  49     ADD_EXECUTABLE(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
  50     TARGET_LINK_LIBRARIES(clitkVFResample clitkCommon ITKIO)
  51
  52     WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
  53     ADD_EXECUTABLE(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
  54     TARGET_LINK_LIBRARIES(clitkImageCreate clitkCommon  ITKIO)
  55
  56     WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
  57     ADD_EXECUTABLE(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
  58     TARGET_LINK_LIBRARIES(clitkZeroVF clitkCommon  ITKIO)
  59
  60     WRAP_GGO(clitkImageExtractLine_GGO_C clitkImageExtractLine.ggo)
  61     ADD_EXECUTABLE(clitkImageExtractLine clitkImageExtractLine.cxx ${clitkImageExtractLine_GGO_C})
  62     TARGET_LINK_LIBRARIES(clitkImageExtractLine clitkCommon  ITKIO)
  63
  64     WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
  65     ADD_EXECUTABLE(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
  66     TARGET_LINK_LIBRARIES(clitkSplitImage clitkCommon ITKIO )
  67
  68     WRAP_GGO(clitkVFMerge_GGO_C clitkVFMerge.ggo)
  69     ADD_EXECUTABLE(clitkVFMerge clitkVFMerge.cxx ${clitkVFMerge_GGO_C})
  70     TARGET_LINK_LIBRARIES(clitkVFMerge ITKBasicFilters clitkCommon ITKIO)
  71
  72     WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
  73     ADD_EXECUTABLE(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
  74     TARGET_LINK_LIBRARIES(clitkWriteDicomSeries clitkCommon ITKIO )
  75
  76     WRAP_GGO(clitkAverageTemporalDimension_GGO_C clitkAverageTemporalDimension.ggo)
  77     ADD_EXECUTABLE(clitkAverageTemporalDimension clitkAverageTemporalDimension.cxx ${clitkAverageTemporalDimension_GGO_C})
  78     TARGET_LINK_LIBRARIES(clitkAverageTemporalDimension clitkCommon ITKIO )
  79
  80     WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
  81     ADD_EXECUTABLE(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
  82         ${clitkMedianTemporalDimension_GGO_C})
  83     TARGET_LINK_LIBRARIES(clitkMedianTemporalDimension clitkCommon ITKIO )
  84
  85     WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
  86     ADD_EXECUTABLE(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
  87     TARGET_LINK_LIBRARIES(clitkWarpImage ITKBasicFilters clitkCommon ITKIO)
  88
  89     WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
  90     ADD_EXECUTABLE(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
  91     TARGET_LINK_LIBRARIES(clitkInvertVF clitkCommon ITKIO )
  92
  93     ADD_EXECUTABLE(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
  94     TARGET_LINK_LIBRARIES(clitkAffineTransform clitkCommon ITKIO )
  95
  96     WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
  97     ADD_EXECUTABLE(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
  98     TARGET_LINK_LIBRARIES(clitkSetBackground clitkCommon ITKIO)
  99
 100     WRAP_GGO(clitkGuerreroVentilation_GGO_C clitkGuerreroVentilation.ggo)
 101     ADD_EXECUTABLE(clitkGuerreroVentilation clitkGuerreroVentilation.cxx clitkGuerreroVentilationGenericFilter.cxx ${clitkGuerreroVentilation_GGO_C})
 102     TARGET_LINK_LIBRARIES(clitkGuerreroVentilation clitkCommon ITKIO)
 103
 104     ADD_EXECUTABLE(clitkImageArithm clitkImageArithm.cxx ${clitkImageArithm_GGO_C})
 105     TARGET_LINK_LIBRARIES(clitkImageArithm clitkImageArithmImageLib clitkCommon ITKIO )
 106
 107     WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
 108     ADD_EXECUTABLE(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
 109     TARGET_LINK_LIBRARIES(clitkUnsharpMask clitkCommon ITKIO )
 110
 111     WRAP_GGO(clitkFooImage_GGO_C clitkFooImage.ggo)
 112     ADD_EXECUTABLE(clitkFooImage clitkFooImage.cxx ${clitkFooImage_GGO_C})
 113     TARGET_LINK_LIBRARIES(clitkFooImage clitkCommon ITKIO )
 114
 115     ADD_EXECUTABLE(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
 116     TARGET_LINK_LIBRARIES(clitkMedianImageFilter clitkCommon ITKIO ITKBasicFilters )
 117
 118     WRAP_GGO(clitkResampleImage_GGO_C clitkResampleImage.ggo)
 119     ADD_EXECUTABLE(clitkResampleImage clitkResampleImage.cxx clitkResampleImageGenericFilter.cxx ${clitkResampleImage_GGO_C})
 120     TARGET_LINK_LIBRARIES(clitkResampleImage clitkCommon ITKIO)
 121
 122     WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
 123     ADD_EXECUTABLE(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
 124     TARGET_LINK_LIBRARIES(clitkMinMaxMask clitkCommon ITKIO  )
 125
 126     # WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
 127     # ADD_EXECUTABLE(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
 128     # TARGET_LINK_LIBRARIES(clitkAutoCrop clitkCommon ITKIO )
 129
 130     WRAP_GGO(clitkDicomRTStruct2BinaryImage_GGO_C clitkDicomRTStruct2BinaryImage.ggo)
 131     ADD_EXECUTABLE(clitkDicomRTStruct2BinaryImage clitkDicomRT_ROI_ConvertToImageFilter.cxx clitkDicomRTStruct2BinaryImage.cxx ${clitkDicomRTStruct2BinaryImage_GGO_C})
 132     TARGET_LINK_LIBRARIES(clitkDicomRTStruct2BinaryImage ITKCommon clitkDicomRTStruct clitkCommon ITKIO )
 133
 134     WRAP_GGO(clitkImageLog_GGO_C clitkImageLog.ggo)
 135     ADD_EXECUTABLE(clitkImageLog clitkImageLog.cxx ${clitkImageLog_GGO_C})
 136     TARGET_LINK_LIBRARIES(clitkImageLog  ITKIO clitkCommon)
 137
 138     WRAP_GGO(clitkFilter_GGO_C clitkFilter.ggo)
 139     ADD_EXECUTABLE(clitkFilter clitkFilter.cxx clitkFilterGenericFilter.cxx ${clitkFilter_GGO_C})
 140     TARGET_LINK_LIBRARIES(clitkFilter ITKIO clitkCommon)
 141
 142     WRAP_GGO(clitkConeBeamProjectImage_GGO_C clitkConeBeamProjectImage.ggo)
 143     ADD_EXECUTABLE(clitkConeBeamProjectImage clitkConeBeamProjectImage.cxx clitkConeBeamProjectImageGenericFilter.cxx ${clitkConeBeamProjectImage_GGO_C})
 144     TARGET_LINK_LIBRARIES(clitkConeBeamProjectImage  ITKIO clitkCommon )
 145
 146     WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
 147     ADD_EXECUTABLE(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
 148     TARGET_LINK_LIBRARIES(clitkComposeVF ITKBasicFilters ITKIO clitkCommon)
 149
 150     WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
 151     ADD_EXECUTABLE(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
 152     TARGET_LINK_LIBRARIES(clitkMergeSequence ITKIO clitkCommon)
 153
 154     WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
 155     ADD_EXECUTABLE(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
 156     TARGET_LINK_LIBRARIES(clitkBackProjectImage ITKIO clitkCommon )
 157
 158 #    WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
 159     ADD_EXECUTABLE(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
 160     TARGET_LINK_LIBRARIES(clitkCropImage clitkCommon ITKIO)
 161
 162 # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
 163 # ADD_EXECUTABLE(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
 164 # TARGET_LINK_LIBRARIES(clitkExtractSlice clitkCommon ITKIO)
 165
 166     WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
 167     ADD_EXECUTABLE(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
 168     TARGET_LINK_LIBRARIES(clitkFlipImage clitkCommon ITKIO)
 169
 170     WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
 171     ADD_EXECUTABLE(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
 172     TARGET_LINK_LIBRARIES(clitkMirrorPadImage clitkCommon ITKIO)
 173
 174     WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
 175     ADD_EXECUTABLE(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
 176     TARGET_LINK_LIBRARIES(clitkImageMoment clitkCommon ITKIO)
 177
 178     WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
 179     ADD_EXECUTABLE(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
 180     TARGET_LINK_LIBRARIES(clitkImageStatistics clitkCommon ITKIO ITKStatistics)
 181
 182     WRAP_GGO(clitkSetOrigin_GGO_C clitkSetOrigin.ggo)
 183     ADD_EXECUTABLE(clitkSetOrigin clitkSetOrigin.cxx clitkSetOriginGenericFilter.cxx ${clitkSetOrigin_GGO_C})
 184     TARGET_LINK_LIBRARIES(clitkSetOrigin clitkCommon ITKIO )
 185
 186     WRAP_GGO(clitkGetOrigin_GGO_C clitkGetOrigin.ggo)
 187     ADD_EXECUTABLE(clitkGetOrigin clitkGetOrigin.cxx clitkGetOriginGenericFilter.cxx ${clitkGetOrigin_GGO_C})
 188     TARGET_LINK_LIBRARIES(clitkGetOrigin clitkCommon ITKIO )
 189
 190     WRAP_GGO(clitkGetDirection_GGO_C clitkGetDirection.ggo)
 191     ADD_EXECUTABLE(clitkGetDirection clitkGetDirection.cxx clitkGetDirectionGenericFilter.cxx ${clitkGetDirection_GGO_C})
 192     TARGET_LINK_LIBRARIES(clitkGetDirection clitkCommon ITKIO)
 193
 194     WRAP_GGO(clitkSetDirection_GGO_C clitkSetDirection.ggo)
 195     ADD_EXECUTABLE(clitkSetDirection clitkSetDirection.cxx clitkSetDirectionGenericFilter.cxx ${clitkSetDirection_GGO_C})
 196     TARGET_LINK_LIBRARIES(clitkSetDirection clitkCommon ITKIO)
 197
 198     WRAP_GGO(clitkGetSize_GGO_C clitkGetSize.ggo)
 199     ADD_EXECUTABLE(clitkGetSize  clitkGetSize.cxx clitkGetSizeGenericFilter.cxx ${clitkGetSize_GGO_C})
 200     TARGET_LINK_LIBRARIES(clitkGetSize  clitkCommon   ITKIO)
 201
 202     WRAP_GGO(clitkGetSpacing_GGO_C clitkGetSpacing.ggo)
 203     ADD_EXECUTABLE(clitkGetSpacing  clitkGetSpacing.cxx clitkGetSpacingGenericFilter.cxx ${clitkGetSpacing_GGO_C})
 204     TARGET_LINK_LIBRARIES(clitkGetSpacing  clitkCommon   ITKIO)
 205
 206     WRAP_GGO(clitkSetSpacing_GGO_C clitkSetSpacing.ggo)
 207     ADD_EXECUTABLE(clitkSetSpacing  clitkSetSpacing.cxx clitkSetSpacingGenericFilter.cxx ${clitkSetSpacing_GGO_C})
 208     TARGET_LINK_LIBRARIES(clitkSetSpacing  clitkCommon   ITKIO)
 209
 210     WRAP_GGO(clitkCombineImage_GGO_C clitkCombineImage.ggo)
 211     ADD_EXECUTABLE(clitkCombineImage clitkCombineImage.cxx clitkCombineImageGenericFilter.cxx ${clitkCombineImage_GGO_C})
 212     TARGET_LINK_LIBRARIES(clitkCombineImage clitkCommon ITKIO)
 213
 214     WRAP_GGO(clitkPermuteAxes_GGO_C clitkPermuteAxes.ggo)
 215     ADD_EXECUTABLE(clitkPermuteAxes clitkPermuteAxes.cxx clitkPermuteAxesGenericFilter.cxx ${clitkPermuteAxes_GGO_C})
 216     TARGET_LINK_LIBRARIES(clitkPermuteAxes clitkCommon ITKIO)
 217
 218     WRAP_GGO(clitkChangeImageOrientation_GGO_C clitkChangeImageOrientation.ggo)
 219     ADD_EXECUTABLE(clitkChangeImageOrientation clitkChangeImageOrientation.cxx clitkChangeImageOrientationGenericFilter.cxx ${clitkChangeImageOrientation_GGO_C})
 220     TARGET_LINK_LIBRARIES(clitkChangeImageOrientation clitkCommon ITKIO)
 221
 222     WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
 223     ADD_EXECUTABLE(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
 224     TARGET_LINK_LIBRARIES(clitkVFConvert ITKBasicFilters ITKIO clitkCommon )
 225
 226     WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
 227     ADD_EXECUTABLE(clitkImageToVectorImage  clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
 228     TARGET_LINK_LIBRARIES(clitkImageToVectorImage  clitkCommon   ITKIO)
 229
 230     WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
 231     ADD_EXECUTABLE(clitkVectorImageToImage  clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
 232     TARGET_LINK_LIBRARIES(clitkVectorImageToImage  clitkCommon   ITKIO)
 233
 234     WRAP_GGO(clitkBSplineCoefficientsToValues_GGO_C clitkBSplineCoefficientsToValues.ggo)
 235     ADD_EXECUTABLE(clitkBSplineCoefficientsToValues  clitkBSplineCoefficientsToValues.cxx clitkBSplineCoefficientsToValuesGenericFilter.cxx ${clitkBSplineCoefficientsToValues_GGO_C})
 236     TARGET_LINK_LIBRARIES(clitkBSplineCoefficientsToValues  clitkCommon   ITKIO)
 237
 238     WRAP_GGO(clitkValuesToBSplineCoefficients_GGO_C clitkValuesToBSplineCoefficients.ggo)
 239     ADD_EXECUTABLE(clitkValuesToBSplineCoefficients  clitkValuesToBSplineCoefficients.cxx clitkValuesToBSplineCoefficientsGenericFilter.cxx ${clitkValuesToBSplineCoefficients_GGO_C})
 240     TARGET_LINK_LIBRARIES(clitkValuesToBSplineCoefficients clitkCommon ITKIO)
 241
 242     WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo)
 243     ADD_EXECUTABLE(clitkMIP  clitkMIP.cxx clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
 244     TARGET_LINK_LIBRARIES(clitkMIP clitkCommon ITKIO)
 245
 246     WRAP_GGO(clitkRelativePosition_GGO_C clitkRelativePosition.ggo)
 247     ADD_EXECUTABLE(clitkRelativePosition  clitkRelativePosition.cxx ${clitkRelativePosition_GGO_C})
 248     TARGET_LINK_LIBRARIES(clitkRelativePosition clitkCommon ITKIO)
 249
 250 ENDIF(CLITK_BUILD_TOOLS)