tools/CMakeLists.txt

   1 #=========================================================
   2 # Add Libraries used in vv and clitk to avoid recompilation
   3 WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
   4 add_library(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
   5
   6 WRAP_GGO(clitkImageConvert_GGO_C clitkImageConvert.ggo)
   7 add_library(clitkImageConvertLib clitkImageConvertGenericFilter.cxx ${clitkImageConvert_GGO_C})
   8
   9 WRAP_GGO(clitkBinarizeImage_GGO_C clitkBinarizeImage.ggo)
  10 add_library(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx ${clitkBinarizeImage_GGO_C})
  11
  12 WRAP_GGO(clitkProfileImage_GGO_C clitkProfileImage.ggo)
  13 add_library(clitkProfileImageLib clitkProfileImageGenericFilter.cxx ${clitkProfileImage_GGO_C})
  14
  15 WRAP_GGO(clitkHistogramImage_GGO_C clitkHistogramImage.ggo)
  16 add_library(clitkHistogramImageLib clitkHistogramImageGenericFilter.cxx ${clitkHistogramImage_GGO_C})
  17
  18 WRAP_GGO(clitkImageArithm_GGO_C clitkImageArithm.ggo)
  19 add_library(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx ${clitkImageArithm_GGO_C})
  20
  21 WRAP_GGO(clitkVectorArithm_GGO_C clitkVectorArithm.ggo)
  22 add_library(clitkVectorArithmLib clitkVectorArithmGenericFilter.cxx ${clitkVectorArithm_GGO_C})
  23
  24 WRAP_GGO(clitkResampleImage_GGO_C clitkResampleImage.ggo)
  25 add_library(clitkResampleImageLib clitkResampleImageGenericFilter.cxx ${clitkResampleImage_GGO_C})
  26
  27 WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo)
  28 add_library(clitkMIPLib clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
  29
  30 WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
  31 add_library(clitkMedianImageFilterLib clitkMedianImageGenericFilter.cxx ${clitkMedianImageFilter_GGO_C})
  32
  33 #=========================================================
  34 if(CLITK_BUILD_TOOLS)
  35
  36   WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
  37   add_executable(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
  38   target_link_libraries(clitkDicomInfo clitkCommon)
  39   # set_target_properties(clitkDicomInfo
  40   #   PROPERTIES
  41   #   LINK_INTERFACE_LIBRARIES ""
  42   #   )
  43   set(TOOLS_INSTALL clitkDicomInfo)
  44
  45   WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
  46   add_executable(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
  47   target_link_libraries(clitkDicom2Image clitkCommon)
  48   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
  49
  50   WRAP_GGO(clitkDicomWave2Text_GGO_C clitkDicomWave2Text.ggo)
  51   add_executable(clitkDicomWave2Text clitkDicomWave2Text.cxx ${clitkDicomWave2Text_GGO_C})
  52   target_link_libraries(clitkDicomWave2Text clitkCommon)
  53   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomWave2Text)
  54
  55   WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
  56   add_executable(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
  57   target_link_libraries(clitkImageInfo clitkCommon)
  58   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo)
  59
  60   add_executable(clitkImageConvert clitkImageConvert.cxx)
  61   target_link_libraries(clitkImageConvert clitkImageConvertLib clitkCommon)
  62   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageConvert)
  63
  64   add_executable(clitkBinarizeImage clitkBinarizeImage.cxx)
  65   target_link_libraries(clitkBinarizeImage clitkBinarizeImageLib clitkCommon)
  66   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinarizeImage)
  67
  68   add_executable(clitkProfileImage clitkProfileImage.cxx)
  69   target_link_libraries(clitkProfileImage clitkProfileImageLib clitkCommon)
  70   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkProfileImage)
  71
  72   WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo)
  73   add_executable(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
  74   target_link_libraries(clitkVFResample clitkCommon)
  75   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFResample)
  76
  77   WRAP_GGO(clitkVFInterpolate_GGO_C clitkVFInterpolate.ggo)
  78   add_executable(clitkVFInterpolate clitkVFInterpolate.cxx clitkVFInterpolateGenericFilter.cxx ${clitkVFInterpolate_GGO_C})
  79   target_link_libraries(clitkVFInterpolate clitkCommon)
  80   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFInterpolate)
  81
  82   WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
  83   add_executable(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
  84   target_link_libraries(clitkImageCreate clitkCommon)
  85   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageCreate)
  86
  87   WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
  88   add_executable(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
  89   target_link_libraries(clitkZeroVF clitkCommon)
  90   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkZeroVF)
  91
  92   WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
  93   add_executable(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
  94   target_link_libraries(clitkSplitImage clitkCommon )
  95   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSplitImage)
  96
  97   WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
  98   add_executable(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
  99   target_link_libraries(clitkWriteDicomSeries clitkCommon )
 100   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries)
 101
 102   WRAP_GGO(clitkGateSimulation2Dicom_GGO_C clitkGateSimulation2Dicom.ggo)
 103   add_executable(clitkGateSimulation2Dicom clitkGateSimulation2Dicom.cxx ${clitkGateSimulation2Dicom_GGO_C})
 104   target_link_libraries(clitkGateSimulation2Dicom clitkCommon )
 105   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGateSimulation2Dicom)
 106
 107   WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
 108   add_executable(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
 109     ${clitkMedianTemporalDimension_GGO_C})
 110   target_link_libraries(clitkMedianTemporalDimension clitkCommon )
 111   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianTemporalDimension)
 112
 113   WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
 114   add_executable(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
 115   target_link_libraries(clitkWarpImage clitkCommon)
 116   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWarpImage)
 117
 118   WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
 119   add_executable(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
 120   target_link_libraries(clitkInvertVF clitkCommon)
 121   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkInvertVF)
 122
 123   WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo)
 124   add_executable(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
 125   target_link_libraries(clitkAffineTransform clitkCommon )
 126   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform)
 127
 128   WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo)
 129   add_executable(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C})
 130   target_link_libraries(clitkElastixTransformToMatrix clitkCommon )
 131   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix)
 132
 133   WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo)
 134   add_executable(clitkMatrixToElastixTransform clitkMatrixToElastixTransform.cxx ${clitkMatrixToElastixTransform_GGO_C})
 135   target_link_libraries(clitkMatrixToElastixTransform clitkCommon )
 136   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixToElastixTransform)
 137
 138   WRAP_GGO(clitkMatrixMultiply_GGO_C clitkMatrixMultiply.ggo)
 139   add_executable(clitkMatrixMultiply clitkMatrixMultiply.cxx ${clitkMatrixMultiply_GGO_C})
 140   target_link_libraries(clitkMatrixMultiply clitkCommon )
 141   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixMultiply)
 142
 143   WRAP_GGO(clitkMatrixInverse_GGO_C clitkMatrixInverse.ggo)
 144   add_executable(clitkMatrixInverse clitkMatrixInverse.cxx ${clitkMatrixInverse_GGO_C})
 145   target_link_libraries(clitkMatrixInverse clitkCommon )
 146   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixInverse)
 147
 148   WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
 149   add_executable(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
 150   target_link_libraries(clitkSetBackground clitkCommon)
 151   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground)
 152
 153   WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
 154   add_executable(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
 155   target_link_libraries(clitkGammaIndex clitkCommon)
 156   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
 157
 158   add_executable(clitkImageArithm clitkImageArithm.cxx)
 159   target_link_libraries(clitkImageArithm clitkImageArithmImageLib clitkCommon )
 160   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageArithm)
 161
 162   add_executable(clitkVectorArithm clitkVectorArithm.cxx)
 163   target_link_libraries(clitkVectorArithm clitkVectorArithmLib clitkCommon )
 164   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorArithm)
 165
 166   WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
 167   add_executable(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
 168   target_link_libraries(clitkUnsharpMask clitkCommon )
 169   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
 170
 171   WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
 172   add_executable(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
 173   target_link_libraries(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
 174   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
 175
 176   add_executable(clitkResampleImage clitkResampleImage.cxx)
 177   target_link_libraries(clitkResampleImage clitkResampleImageLib clitkCommon)
 178   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkResampleImage)
 179
 180   WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
 181   add_executable(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
 182   target_link_libraries(clitkMinMaxMask clitkCommon  )
 183   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMinMaxMask)
 184
 185   WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
 186   add_executable(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
 187   target_link_libraries(clitkAutoCrop clitkCommon )
 188   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
 189
 190   WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
 191   add_executable(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
 192   target_link_libraries(clitkDicomRTStruct2Image clitkDicomRTStruct)
 193   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
 194
 195   if(CLITK_USE_SYSTEM_GDCM)
 196     WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
 197     add_executable(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
 198     target_link_libraries(clitkImage2DicomRTStruct clitkDicomRTStruct)
 199   endif()
 200
 201   WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
 202   add_executable(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
 203   target_link_libraries(clitkComposeVF clitkCommon  )
 204   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkComposeVF)
 205
 206   WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
 207   add_executable(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
 208   target_link_libraries(clitkMergeSequence clitkCommon)
 209   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeSequence)
 210
 211   WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
 212   add_executable(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
 213   target_link_libraries(clitkBackProjectImage clitkCommon)
 214   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBackProjectImage)
 215
 216   add_executable(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
 217   target_link_libraries(clitkCropImage clitkCropImageLib clitkCommon)
 218   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCropImage)
 219
 220   # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
 221   # add_executable(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
 222   # target_link_libraries(clitkExtractSlice clitkCommon)
 223   #set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
 224
 225   WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
 226   add_executable(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
 227   target_link_libraries(clitkFlipImage clitkCommon)
 228   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFlipImage)
 229
 230   WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
 231   add_executable(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
 232   target_link_libraries(clitkMirrorPadImage clitkCommon)
 233   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMirrorPadImage)
 234
 235   WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
 236   add_executable(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
 237   target_link_libraries(clitkImageMoment clitkCommon)
 238   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment)
 239
 240   WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
 241   add_executable(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
 242   target_link_libraries(clitkImageStatistics clitkCommon)
 243   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics)
 244
 245   WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
 246   add_executable(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
 247   target_link_libraries(clitkVFConvert clitkCommon )
 248   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFConvert)
 249
 250   WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
 251   add_executable(clitkImageToVectorImage  clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
 252   target_link_libraries(clitkImageToVectorImage  clitkCommon)
 253   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageToVectorImage)
 254
 255   WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
 256   add_executable(clitkVectorImageToImage  clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
 257   target_link_libraries(clitkVectorImageToImage  clitkCommon)
 258   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage)
 259
 260   WRAP_GGO(clitkNVectorImageTo4DImage_GGO_C clitkNVectorImageTo4DImage.ggo)
 261   add_executable(clitkNVectorImageTo4DImage  clitkNVectorImageTo4DImage.cxx clitkNVectorImageTo4DImageGenericFilter.cxx ${clitkNVectorImageTo4DImage_GGO_C})
 262   target_link_libraries(clitkNVectorImageTo4DImage  clitkCommon)
 263   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNVectorImageTo4DImage)
 264
 265   WRAP_GGO(clitk4DImageToNVectorImage_GGO_C clitk4DImageToNVectorImage.ggo)
 266   add_executable(clitk4DImageToNVectorImage  clitk4DImageToNVectorImage.cxx clitk4DImageToNVectorImageGenericFilter.cxx ${clitk4DImageToNVectorImage_GGO_C})
 267   target_link_libraries(clitk4DImageToNVectorImage  clitkCommon)
 268   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitk4DImageToNVectorImage)
 269
 270   add_executable(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx)
 271   target_link_libraries(clitkMIP clitkMIPLib clitkCommon)
 272   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP)
 273
 274   WRAP_GGO(clitkSum_GGO_C clitkSum.ggo)
 275   add_executable(clitkSum clitkSum.cxx ${clitkSum_GGO_C})
 276   target_link_libraries(clitkSum clitkCommon)
 277   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSum)
 278
 279   WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
 280   add_executable(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
 281   target_link_libraries(clitkTransformLandmarks clitkCommon)
 282   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks)
 283
 284   WRAP_GGO(clitkMaskLandmarks_GGO_C clitkMaskLandmarks.ggo)
 285   add_executable(clitkMaskLandmarks clitkMaskLandmarks.cxx ${clitkMaskLandmarks_GGO_C})
 286   target_link_libraries(clitkMaskLandmarks clitkCommon)
 287   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskLandmarks)
 288
 289   WRAP_GGO(clitkJacobianImage_GGO_C clitkJacobianImage.ggo)
 290   add_executable(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
 291   target_link_libraries(clitkJacobianImage clitkCommon)
 292   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
 293
 294   WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
 295   add_executable(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
 296   target_link_libraries(clitkPadImage clitkCommon)
 297   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
 298
 299   WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
 300   add_executable(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
 301   target_link_libraries(clitkCatImage clitkCommon)
 302   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
 303
 304   WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
 305   add_executable(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
 306     clitkAnisotropicDiffusionGenericFilter.cxx
 307     ${clitkAnisotropicDiffusion_GGO_C})
 308   target_link_libraries(clitkAnisotropicDiffusion clitkCommon)
 309   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
 310
 311   WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
 312   add_executable(clitkChangeImageInfo clitkChangeImageInfo.cxx
 313     clitkChangeImageInfoGenericFilter.cxx
 314     ${clitkChangeImageInfo_GGO_C})
 315   target_link_libraries(clitkChangeImageInfo clitkCommon)
 316   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
 317
 318   WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
 319   add_executable(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
 320   target_link_libraries(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
 321   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
 322
 323   WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
 324   add_executable(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
 325   target_link_libraries(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
 326   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
 327
 328   WRAP_GGO(clitkNormalizeImageFilter_GGO_C clitkNormalizeImageFilter.ggo)
 329   add_executable(clitkNormalizeImageFilter clitkNormalizeImageFilter.cxx ${clitkNormalizeImageFilter_GGO_C})
 330   target_link_libraries(clitkNormalizeImageFilter clitkCommon )
 331   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNormalizeImageFilter)
 332
 333   WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
 334   add_executable(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
 335   target_link_libraries(clitkImageGradientMagnitude clitkCommon )
 336   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
 337
 338   WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
 339   add_executable(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
 340   target_link_libraries(clitkImageLaplacian clitkCommon )
 341   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
 342
 343   WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
 344   add_executable(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
 345   target_link_libraries(clitkImageIntensityWindowing clitkCommon )
 346   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
 347
 348   WRAP_GGO(clitkBlurImage_GGO_C clitkBlurImage.ggo)
 349   add_executable(clitkBlurImage clitkBlurImage.cxx ${clitkBlurImage_GGO_C})
 350   target_link_libraries(clitkBlurImage clitkCommon )
 351   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBlurImage)
 352
 353   #=========================================================
 354   option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
 355   if (CLITK_USE_ROOT)
 356     find_package(ROOT REQUIRED)
 357     if(ROOT_FOUND)
 358       message(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
 359     else(ROOT_FOUND)
 360       message(FATAL_ERROR
 361         "Cannot build without ROOT.  Please set ROOTSYS environement variable.")
 362     endif(ROOT_FOUND)
 363     include_directories(${ROOT_INCLUDE_DIR})
 364     link_directories(${ROOT_LIBRARY_DIR})
 365     WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
 366     add_executable(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
 367     target_link_libraries(clitkMergeRootFiles ${ROOT_LIBRARIES})
 368     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
 369   endif()
 370   #=========================================================
 371
 372
 373   #=========================================================
 374   if(CLITK_EXPERIMENTAL)
 375     WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
 376     add_executable(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
 377     target_link_libraries(clitkBinaryImageToMesh clitkCommon)
 378     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
 379
 380     WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
 381     add_executable(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
 382     target_link_libraries(clitkMeshToBinaryImage clitkCommon)
 383     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
 384
 385     WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
 386     add_executable(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
 387     target_link_libraries(clitkMeshViewer clitkCommon)
 388     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
 389   endif(CLITK_EXPERIMENTAL)
 390   #=========================================================
 391
 392
 393   #=========================================================
 394   WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
 395   add_executable(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
 396   target_link_libraries(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
 397   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
 398
 399   WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
 400   add_executable(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
 401   target_link_libraries(clitkDicomRTPlan2Gate clitkCommon)
 402   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
 403   #=========================================================
 404
 405
 406   install(TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
 407
 408 endif(CLITK_BUILD_TOOLS)