tools/CMakeLists.txt

   1 #=========================================================
   2 # Add Libraries used in vv and clitk to avoid recompilation
   3 WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
   4 add_library(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
   5
   6 WRAP_GGO(clitkImageConvert_GGO_C clitkImageConvert.ggo)
   7 add_library(clitkImageConvertLib clitkImageConvertGenericFilter.cxx ${clitkImageConvert_GGO_C})
   8
   9 WRAP_GGO(clitkBinarizeImage_GGO_C clitkBinarizeImage.ggo)
  10 add_library(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx ${clitkBinarizeImage_GGO_C})
  11
  12 WRAP_GGO(clitkProfileImage_GGO_C clitkProfileImage.ggo)
  13 add_library(clitkProfileImageLib clitkProfileImageGenericFilter.cxx ${clitkProfileImage_GGO_C})
  14
  15 WRAP_GGO(clitkHistogramImage_GGO_C clitkHistogramImage.ggo)
  16 add_library(clitkHistogramImageLib clitkHistogramImageGenericFilter.cxx ${clitkHistogramImage_GGO_C})
  17
  18 WRAP_GGO(clitkImageArithm_GGO_C clitkImageArithm.ggo)
  19 add_library(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx ${clitkImageArithm_GGO_C})
  20
  21 WRAP_GGO(clitkVectorArithm_GGO_C clitkVectorArithm.ggo)
  22 add_library(clitkVectorArithmLib clitkVectorArithmGenericFilter.cxx ${clitkVectorArithm_GGO_C})
  23
  24 WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo)
  25 add_library(clitkMIPLib clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
  26
  27 WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
  28 add_library(clitkMedianImageFilterLib clitkMedianImageGenericFilter.cxx ${clitkMedianImageFilter_GGO_C})
  29
  30 #=========================================================
  31 if(CLITK_BUILD_TOOLS)
  32
  33   WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
  34   add_executable(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
  35   target_link_libraries(clitkDicomInfo clitkCommon)
  36   # set_target_properties(clitkDicomInfo
  37   #   PROPERTIES
  38   #   LINK_INTERFACE_LIBRARIES ""
  39   #   )
  40   set(TOOLS_INSTALL clitkDicomInfo)
  41
  42   WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
  43   add_executable(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
  44   target_link_libraries(clitkDicom2Image clitkCommon)
  45   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
  46
  47   WRAP_GGO(clitkDicomWave2Text_GGO_C clitkDicomWave2Text.ggo)
  48   add_executable(clitkDicomWave2Text clitkDicomWave2Text.cxx ${clitkDicomWave2Text_GGO_C})
  49   target_link_libraries(clitkDicomWave2Text clitkCommon)
  50   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomWave2Text)
  51
  52   WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
  53   add_executable(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
  54   target_link_libraries(clitkImageInfo clitkCommon)
  55   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo)
  56
  57   add_executable(clitkImageConvert clitkImageConvert.cxx)
  58   target_link_libraries(clitkImageConvert clitkImageConvertLib clitkCommon)
  59   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageConvert)
  60
  61   add_executable(clitkBinarizeImage clitkBinarizeImage.cxx)
  62   target_link_libraries(clitkBinarizeImage clitkBinarizeImageLib clitkCommon)
  63   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinarizeImage)
  64
  65
  66   add_executable(clitkProfileImage clitkProfileImage.cxx)
  67   target_link_libraries(clitkProfileImage clitkProfileImageLib clitkCommon)
  68   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkProfileImage)
  69
  70   WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo)
  71   add_executable(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
  72   target_link_libraries(clitkVFResample clitkCommon)
  73   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFResample)
  74
  75   WRAP_GGO(clitkVFInterpolate_GGO_C clitkVFInterpolate.ggo)
  76   add_executable(clitkVFInterpolate clitkVFInterpolate.cxx clitkVFInterpolateGenericFilter.cxx ${clitkVFInterpolate_GGO_C})
  77   target_link_libraries(clitkVFInterpolate clitkCommon)
  78   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFInterpolate)
  79
  80   WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
  81   add_executable(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
  82   target_link_libraries(clitkImageCreate clitkCommon)
  83   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageCreate)
  84
  85   WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
  86   add_executable(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
  87   target_link_libraries(clitkZeroVF clitkCommon)
  88   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkZeroVF)
  89
  90   WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
  91   add_executable(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
  92   target_link_libraries(clitkSplitImage clitkCommon )
  93   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSplitImage)
  94
  95   WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
  96   add_executable(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
  97   target_link_libraries(clitkWriteDicomSeries clitkCommon )
  98   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries)
  99
 100   WRAP_GGO(clitkGateSimulation2Dicom_GGO_C clitkGateSimulation2Dicom.ggo)
 101   add_executable(clitkGateSimulation2Dicom clitkGateSimulation2Dicom.cxx ${clitkGateSimulation2Dicom_GGO_C})
 102   target_link_libraries(clitkGateSimulation2Dicom clitkCommon )
 103   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGateSimulation2Dicom)
 104
 105   WRAP_GGO(clitkPartitionEnergyWindowDicom_GGO_C clitkPartitionEnergyWindowDicom.ggo)
 106   add_executable(clitkPartitionEnergyWindowDicom clitkPartitionEnergyWindowDicom.cxx ${clitkPartitionEnergyWindowDicom_GGO_C})
 107   target_link_libraries(clitkPartitionEnergyWindowDicom clitkCommon )
 108   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPartitionEnergyWindowDicom)
 109
 110   WRAP_GGO(clitkUpdateVRTagDicom_GGO_C clitkUpdateVRTagDicom.ggo)
 111   add_executable(clitkUpdateVRTagDicom clitkUpdateVRTagDicom.cxx ${clitkUpdateVRTagDicom_GGO_C})
 112   target_link_libraries(clitkUpdateVRTagDicom clitkCommon )
 113   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUpdateVRTagDicom)
 114
 115   WRAP_GGO(clitkImage2DicomDose_GGO_C clitkImage2DicomDose.ggo)
 116   add_executable(clitkImage2DicomDose clitkImage2DicomDose.cxx ${clitkImage2DicomDose_GGO_C})
 117   target_link_libraries(clitkImage2DicomDose clitkCommon)
 118   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImage2DicomDose)
 119
 120   WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
 121   add_executable(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
 122     ${clitkMedianTemporalDimension_GGO_C})
 123   target_link_libraries(clitkMedianTemporalDimension clitkCommon )
 124   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianTemporalDimension)
 125
 126   WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
 127   add_executable(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
 128   target_link_libraries(clitkWarpImage clitkCommon)
 129   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWarpImage)
 130
 131   WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
 132   add_executable(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
 133   target_link_libraries(clitkInvertVF clitkCommon)
 134   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkInvertVF)
 135
 136   WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo)
 137   add_executable(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
 138   target_link_libraries(clitkAffineTransform clitkCommon )
 139   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform)
 140
 141   WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo)
 142   add_executable(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C})
 143   target_link_libraries(clitkElastixTransformToMatrix clitkCommon )
 144   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix)
 145
 146   WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo)
 147   add_executable(clitkMatrixToElastixTransform clitkMatrixToElastixTransform.cxx ${clitkMatrixToElastixTransform_GGO_C})
 148   target_link_libraries(clitkMatrixToElastixTransform clitkCommon )
 149   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixToElastixTransform)
 150
 151   WRAP_GGO(clitkMatrixMultiply_GGO_C clitkMatrixMultiply.ggo)
 152   add_executable(clitkMatrixMultiply clitkMatrixMultiply.cxx ${clitkMatrixMultiply_GGO_C})
 153   target_link_libraries(clitkMatrixMultiply clitkCommon )
 154   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixMultiply)
 155
 156   WRAP_GGO(clitkMatrixInverse_GGO_C clitkMatrixInverse.ggo)
 157   add_executable(clitkMatrixInverse clitkMatrixInverse.cxx ${clitkMatrixInverse_GGO_C})
 158   target_link_libraries(clitkMatrixInverse clitkCommon )
 159   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixInverse)
 160
 161   WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
 162   add_executable(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
 163   target_link_libraries(clitkSetBackground clitkCommon)
 164   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground)
 165
 166   WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
 167   add_executable(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
 168   target_link_libraries(clitkGammaIndex clitkCommon)
 169   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
 170
 171   add_executable(clitkImageArithm clitkImageArithm.cxx)
 172   target_link_libraries(clitkImageArithm clitkImageArithmImageLib clitkCommon )
 173   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageArithm)
 174
 175   add_executable(clitkVectorArithm clitkVectorArithm.cxx)
 176   target_link_libraries(clitkVectorArithm clitkVectorArithmLib clitkCommon )
 177   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorArithm)
 178
 179   WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
 180   add_executable(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
 181   target_link_libraries(clitkUnsharpMask clitkCommon )
 182   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
 183
 184   WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
 185   add_executable(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
 186   target_link_libraries(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
 187   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
 188
 189   WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
 190   add_executable(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
 191   target_link_libraries(clitkMinMaxMask clitkCommon  )
 192   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMinMaxMask)
 193
 194   WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
 195   add_executable(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
 196   target_link_libraries(clitkAutoCrop clitkCommon )
 197   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
 198
 199   WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
 200   add_executable(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
 201   target_link_libraries(clitkDicomRTStruct2Image clitkDicomRTStruct)
 202   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
 203
 204   if(CLITK_USE_SYSTEM_GDCM)
 205     WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
 206     add_executable(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
 207     target_link_libraries(clitkImage2DicomRTStruct clitkDicomRTStruct)
 208   endif()
 209
 210   WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
 211   add_executable(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
 212   target_link_libraries(clitkComposeVF clitkCommon  )
 213   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkComposeVF)
 214
 215   WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
 216   add_executable(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
 217   target_link_libraries(clitkMergeSequence clitkCommon)
 218   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeSequence)
 219
 220   WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
 221   add_executable(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
 222   target_link_libraries(clitkBackProjectImage clitkCommon)
 223   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBackProjectImage)
 224
 225   add_executable(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
 226   target_link_libraries(clitkCropImage clitkCropImageLib clitkCommon)
 227   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCropImage)
 228
 229   # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
 230   # add_executable(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
 231   # target_link_libraries(clitkExtractSlice clitkCommon)
 232   #set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
 233
 234   WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
 235   add_executable(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
 236   target_link_libraries(clitkFlipImage clitkCommon)
 237   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFlipImage)
 238
 239   WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
 240   add_executable(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
 241   target_link_libraries(clitkMirrorPadImage clitkCommon)
 242   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMirrorPadImage)
 243
 244   WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
 245   add_executable(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
 246   target_link_libraries(clitkImageMoment clitkCommon)
 247   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment)
 248
 249   WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
 250   add_executable(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
 251   target_link_libraries(clitkImageStatistics clitkCommon)
 252   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics)
 253
 254   WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
 255   add_executable(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
 256   target_link_libraries(clitkVFConvert clitkCommon )
 257   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFConvert)
 258
 259   WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
 260   add_executable(clitkImageToVectorImage  clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
 261   target_link_libraries(clitkImageToVectorImage  clitkCommon)
 262   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageToVectorImage)
 263
 264   WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
 265   add_executable(clitkVectorImageToImage  clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
 266   target_link_libraries(clitkVectorImageToImage  clitkCommon)
 267   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage)
 268
 269   WRAP_GGO(clitkNVectorImageTo4DImage_GGO_C clitkNVectorImageTo4DImage.ggo)
 270   add_executable(clitkNVectorImageTo4DImage  clitkNVectorImageTo4DImage.cxx clitkNVectorImageTo4DImageGenericFilter.cxx ${clitkNVectorImageTo4DImage_GGO_C})
 271   target_link_libraries(clitkNVectorImageTo4DImage  clitkCommon)
 272   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNVectorImageTo4DImage)
 273
 274   WRAP_GGO(clitk4DImageToNVectorImage_GGO_C clitk4DImageToNVectorImage.ggo)
 275   add_executable(clitk4DImageToNVectorImage  clitk4DImageToNVectorImage.cxx clitk4DImageToNVectorImageGenericFilter.cxx ${clitk4DImageToNVectorImage_GGO_C})
 276   target_link_libraries(clitk4DImageToNVectorImage  clitkCommon)
 277   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitk4DImageToNVectorImage)
 278
 279   add_executable(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx)
 280   target_link_libraries(clitkMIP clitkMIPLib clitkCommon)
 281   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP)
 282
 283   WRAP_GGO(clitkSum_GGO_C clitkSum.ggo)
 284   add_executable(clitkSum clitkSum.cxx ${clitkSum_GGO_C})
 285   target_link_libraries(clitkSum clitkCommon)
 286   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSum)
 287
 288   WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
 289   add_executable(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
 290   target_link_libraries(clitkTransformLandmarks clitkCommon)
 291   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks)
 292
 293   WRAP_GGO(clitkMaskLandmarks_GGO_C clitkMaskLandmarks.ggo)
 294   add_executable(clitkMaskLandmarks clitkMaskLandmarks.cxx ${clitkMaskLandmarks_GGO_C})
 295   target_link_libraries(clitkMaskLandmarks clitkCommon)
 296   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskLandmarks)
 297
 298   WRAP_GGO(clitkJacobianImage_GGO_C clitkJacobianImage.ggo)
 299   add_executable(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
 300   target_link_libraries(clitkJacobianImage clitkCommon)
 301   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
 302
 303   WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
 304   add_executable(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
 305   target_link_libraries(clitkPadImage clitkCommon)
 306   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
 307
 308   WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
 309   add_executable(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
 310   target_link_libraries(clitkCatImage clitkCommon)
 311   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
 312
 313   WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
 314   add_executable(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
 315     clitkAnisotropicDiffusionGenericFilter.cxx
 316     ${clitkAnisotropicDiffusion_GGO_C})
 317   target_link_libraries(clitkAnisotropicDiffusion clitkCommon)
 318   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
 319
 320   WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
 321   add_executable(clitkChangeImageInfo clitkChangeImageInfo.cxx
 322     clitkChangeImageInfoGenericFilter.cxx
 323     ${clitkChangeImageInfo_GGO_C})
 324   target_link_libraries(clitkChangeImageInfo clitkCommon)
 325   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
 326
 327   WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
 328   add_executable(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
 329   target_link_libraries(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
 330   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
 331
 332   WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
 333   add_executable(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
 334   target_link_libraries(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
 335   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
 336
 337   WRAP_GGO(clitkNormalizeImageFilter_GGO_C clitkNormalizeImageFilter.ggo)
 338   add_executable(clitkNormalizeImageFilter clitkNormalizeImageFilter.cxx ${clitkNormalizeImageFilter_GGO_C})
 339   target_link_libraries(clitkNormalizeImageFilter clitkCommon )
 340   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNormalizeImageFilter)
 341
 342   WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
 343   add_executable(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
 344   target_link_libraries(clitkImageGradientMagnitude clitkCommon )
 345   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
 346
 347   WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
 348   add_executable(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
 349   target_link_libraries(clitkImageLaplacian clitkCommon )
 350   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
 351
 352   WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
 353   add_executable(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
 354   target_link_libraries(clitkImageIntensityWindowing clitkCommon )
 355   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
 356
 357   WRAP_GGO(clitkMaskOfIntegratedIntensity_GGO_C clitkMaskOfIntegratedIntensity.ggo)
 358   add_executable(clitkMaskOfIntegratedIntensity clitkMaskOfIntegratedIntensity.cxx ${clitkMaskOfIntegratedIntensity_GGO_C})
 359   target_link_libraries(clitkMaskOfIntegratedIntensity clitkCommon )
 360   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskOfIntegratedIntensity)
 361
 362
 363   WRAP_GGO(clitkBlurImage_GGO_C clitkBlurImage.ggo)
 364   add_executable(clitkBlurImage clitkBlurImage.cxx ${clitkBlurImage_GGO_C})
 365   target_link_libraries(clitkBlurImage clitkCommon )
 366   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBlurImage)
 367
 368   #=========================================================
 369   option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
 370   if (CLITK_USE_ROOT)
 371     find_package(ROOT REQUIRED)
 372     if(ROOT_FOUND)
 373       message(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
 374     else(ROOT_FOUND)
 375       message(FATAL_ERROR
 376         "Cannot build without ROOT.  Please set ROOTSYS environement variable.")
 377     endif(ROOT_FOUND)
 378     include_directories(${ROOT_INCLUDE_DIR})
 379     link_directories(${ROOT_LIBRARY_DIR})
 380     WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
 381     add_executable(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
 382     target_link_libraries(clitkMergeRootFiles ${ROOT_LIBRARIES})
 383     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
 384   endif()
 385   #=========================================================
 386
 387
 388   #=========================================================
 389   if(CLITK_EXPERIMENTAL)
 390     WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
 391     add_executable(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
 392     target_link_libraries(clitkBinaryImageToMesh clitkCommon)
 393     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
 394
 395     WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
 396     add_executable(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
 397     target_link_libraries(clitkMeshToBinaryImage clitkCommon)
 398     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
 399
 400     WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
 401     add_executable(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
 402     target_link_libraries(clitkMeshViewer clitkCommon)
 403     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
 404   endif(CLITK_EXPERIMENTAL)
 405   #=========================================================
 406
 407
 408   #=========================================================
 409   WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
 410   add_executable(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
 411   target_link_libraries(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
 412   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
 413
 414   WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
 415   add_executable(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
 416   target_link_libraries(clitkDicomRTPlan2Gate clitkCommon)
 417   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
 418   #=========================================================
 419
 420
 421   install(TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
 422
 423 endif(CLITK_BUILD_TOOLS)