1 #=========================================================
2 # Add Libraries used in vv and clitk to avoid recompilation
3 WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
4 add_library(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
6 WRAP_GGO(clitkImageConvert_GGO_C clitkImageConvert.ggo)
7 add_library(clitkImageConvertLib clitkImageConvertGenericFilter.cxx ${clitkImageConvert_GGO_C})
9 WRAP_GGO(clitkBinarizeImage_GGO_C clitkBinarizeImage.ggo)
10 add_library(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx ${clitkBinarizeImage_GGO_C})
12 WRAP_GGO(clitkProfileImage_GGO_C clitkProfileImage.ggo)
13 add_library(clitkProfileImageLib clitkProfileImageGenericFilter.cxx ${clitkProfileImage_GGO_C})
15 WRAP_GGO(clitkHistogramImage_GGO_C clitkHistogramImage.ggo)
16 add_library(clitkHistogramImageLib clitkHistogramImageGenericFilter.cxx ${clitkHistogramImage_GGO_C})
18 WRAP_GGO(clitkImageArithm_GGO_C clitkImageArithm.ggo)
19 add_library(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx ${clitkImageArithm_GGO_C})
21 WRAP_GGO(clitkVectorArithm_GGO_C clitkVectorArithm.ggo)
22 add_library(clitkVectorArithmLib clitkVectorArithmGenericFilter.cxx ${clitkVectorArithm_GGO_C})
24 WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo)
25 add_library(clitkMIPLib clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
27 WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
28 add_library(clitkMedianImageFilterLib clitkMedianImageGenericFilter.cxx ${clitkMedianImageFilter_GGO_C})
30 #=========================================================
33 WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
34 add_executable(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
35 target_link_libraries(clitkDicomInfo clitkCommon)
36 # set_target_properties(clitkDicomInfo
38 # LINK_INTERFACE_LIBRARIES ""
40 set(TOOLS_INSTALL clitkDicomInfo)
42 WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
43 add_executable(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
44 target_link_libraries(clitkDicom2Image clitkCommon)
45 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
47 WRAP_GGO(clitkDicomWave2Text_GGO_C clitkDicomWave2Text.ggo)
48 add_executable(clitkDicomWave2Text clitkDicomWave2Text.cxx ${clitkDicomWave2Text_GGO_C})
49 target_link_libraries(clitkDicomWave2Text clitkCommon)
50 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomWave2Text)
52 WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
53 add_executable(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
54 target_link_libraries(clitkImageInfo clitkCommon)
55 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo)
57 add_executable(clitkImageConvert clitkImageConvert.cxx)
58 target_link_libraries(clitkImageConvert clitkImageConvertLib clitkCommon)
59 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageConvert)
61 add_executable(clitkBinarizeImage clitkBinarizeImage.cxx)
62 target_link_libraries(clitkBinarizeImage clitkBinarizeImageLib clitkCommon)
63 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinarizeImage)
65 add_executable(clitkProfileImage clitkProfileImage.cxx)
66 target_link_libraries(clitkProfileImage clitkProfileImageLib clitkCommon)
67 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkProfileImage)
69 add_executable(clitkHistogramImage clitkHistogramImage.cxx)
70 target_link_libraries(clitkHistogramImage clitkHistogramImageLib clitkCommon)
71 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkHistogramImage)
73 WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo)
74 add_executable(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
75 target_link_libraries(clitkVFResample clitkCommon)
76 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFResample)
78 WRAP_GGO(clitkVFInterpolate_GGO_C clitkVFInterpolate.ggo)
79 add_executable(clitkVFInterpolate clitkVFInterpolate.cxx clitkVFInterpolateGenericFilter.cxx ${clitkVFInterpolate_GGO_C})
80 target_link_libraries(clitkVFInterpolate clitkCommon)
81 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFInterpolate)
83 WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
84 add_executable(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
85 target_link_libraries(clitkImageCreate clitkCommon)
86 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageCreate)
88 WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
89 add_executable(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
90 target_link_libraries(clitkZeroVF clitkCommon)
91 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkZeroVF)
93 WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
94 add_executable(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
95 target_link_libraries(clitkSplitImage clitkCommon )
96 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSplitImage)
98 WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
99 add_executable(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
100 target_link_libraries(clitkWriteDicomSeries clitkCommon )
101 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries)
103 WRAP_GGO(clitkChangeDicomTag_GGO_C clitkChangeDicomTag.ggo)
104 add_executable(clitkChangeDicomTag clitkChangeDicomTag.cxx ${clitkChangeDicomTag_GGO_C})
105 target_link_libraries(clitkChangeDicomTag clitkCommon )
106 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeDicomTag)
108 WRAP_GGO(clitkGateSimulation2Dicom_GGO_C clitkGateSimulation2Dicom.ggo)
109 add_executable(clitkGateSimulation2Dicom clitkGateSimulation2Dicom.cxx ${clitkGateSimulation2Dicom_GGO_C})
110 target_link_libraries(clitkGateSimulation2Dicom clitkCommon )
111 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGateSimulation2Dicom)
113 WRAP_GGO(clitkPartitionEnergyWindowDicom_GGO_C clitkPartitionEnergyWindowDicom.ggo)
114 add_executable(clitkPartitionEnergyWindowDicom clitkPartitionEnergyWindowDicom.cxx ${clitkPartitionEnergyWindowDicom_GGO_C})
115 target_link_libraries(clitkPartitionEnergyWindowDicom clitkCommon )
116 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPartitionEnergyWindowDicom)
118 WRAP_GGO(clitkUpdateVRTagDicom_GGO_C clitkUpdateVRTagDicom.ggo)
119 add_executable(clitkUpdateVRTagDicom clitkUpdateVRTagDicom.cxx ${clitkUpdateVRTagDicom_GGO_C})
120 target_link_libraries(clitkUpdateVRTagDicom clitkCommon )
121 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUpdateVRTagDicom)
123 WRAP_GGO(clitkImage2DicomDose_GGO_C clitkImage2DicomDose.ggo)
124 add_executable(clitkImage2DicomDose clitkImage2DicomDose.cxx ${clitkImage2DicomDose_GGO_C})
125 target_link_libraries(clitkImage2DicomDose clitkCommon)
126 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImage2DicomDose)
128 WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
129 add_executable(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
130 ${clitkMedianTemporalDimension_GGO_C})
131 target_link_libraries(clitkMedianTemporalDimension clitkCommon )
132 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianTemporalDimension)
134 WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
135 add_executable(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
136 target_link_libraries(clitkWarpImage clitkCommon)
137 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWarpImage)
139 WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
140 add_executable(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
141 target_link_libraries(clitkInvertVF clitkCommon)
142 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkInvertVF)
144 WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo)
145 add_executable(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
146 target_link_libraries(clitkAffineTransform clitkCommon )
147 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform)
149 WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo)
150 add_executable(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C})
151 target_link_libraries(clitkElastixTransformToMatrix clitkCommon )
152 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix)
154 WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo)
155 add_executable(clitkMatrixToElastixTransform clitkMatrixToElastixTransform.cxx ${clitkMatrixToElastixTransform_GGO_C})
156 target_link_libraries(clitkMatrixToElastixTransform clitkCommon )
157 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixToElastixTransform)
159 WRAP_GGO(clitkMatrixMultiply_GGO_C clitkMatrixMultiply.ggo)
160 add_executable(clitkMatrixMultiply clitkMatrixMultiply.cxx ${clitkMatrixMultiply_GGO_C})
161 target_link_libraries(clitkMatrixMultiply clitkCommon )
162 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixMultiply)
164 WRAP_GGO(clitkMatrixInverse_GGO_C clitkMatrixInverse.ggo)
165 add_executable(clitkMatrixInverse clitkMatrixInverse.cxx ${clitkMatrixInverse_GGO_C})
166 target_link_libraries(clitkMatrixInverse clitkCommon )
167 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixInverse)
169 WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
170 add_executable(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
171 target_link_libraries(clitkSetBackground clitkCommon)
172 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground)
174 WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
175 add_executable(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
176 target_link_libraries(clitkGammaIndex clitkCommon)
177 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
179 add_executable(clitkImageArithm clitkImageArithm.cxx)
180 target_link_libraries(clitkImageArithm clitkImageArithmImageLib clitkCommon )
181 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageArithm)
183 add_executable(clitkVectorArithm clitkVectorArithm.cxx)
184 target_link_libraries(clitkVectorArithm clitkVectorArithmLib clitkCommon )
185 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorArithm)
187 WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
188 add_executable(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
189 target_link_libraries(clitkUnsharpMask clitkCommon )
190 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
192 WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
193 add_executable(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
194 target_link_libraries(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
195 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
197 WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
198 add_executable(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
199 target_link_libraries(clitkMinMaxMask clitkCommon )
200 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMinMaxMask)
202 WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
203 add_executable(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
204 target_link_libraries(clitkAutoCrop clitkCommon )
205 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
207 WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
208 add_executable(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
209 target_link_libraries(clitkDicomRTStruct2Image clitkDicomRTStruct)
210 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
212 if(CLITK_USE_SYSTEM_GDCM)
213 WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
214 add_executable(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
215 target_link_libraries(clitkImage2DicomRTStruct clitkDicomRTStruct)
217 #include pugiXML to parse XML
218 WRAP_GGO(clitkXml2DicomRTStruct_GGO_C clitkXml2DicomRTStruct.ggo)
219 add_executable(clitkXml2DicomRTStruct ../utilities/pugixml/pugixml.cpp clitkXml2DicomRTStruct.cxx ${clitkXml2DicomRTStruct_GGO_C})
220 target_link_libraries(clitkXml2DicomRTStruct clitkDicomRTStruct)
223 WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
224 add_executable(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
225 target_link_libraries(clitkComposeVF clitkCommon )
226 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkComposeVF)
228 WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
229 add_executable(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
230 target_link_libraries(clitkMergeSequence clitkCommon)
231 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeSequence)
233 WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
234 add_executable(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
235 target_link_libraries(clitkBackProjectImage clitkCommon)
236 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBackProjectImage)
238 add_executable(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
239 target_link_libraries(clitkCropImage clitkCropImageLib clitkCommon)
240 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCropImage)
242 # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
243 # add_executable(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
244 # target_link_libraries(clitkExtractSlice clitkCommon)
245 #set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
247 WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
248 add_executable(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
249 target_link_libraries(clitkFlipImage clitkCommon)
250 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFlipImage)
252 WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
253 add_executable(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
254 target_link_libraries(clitkMirrorPadImage clitkCommon)
255 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMirrorPadImage)
257 WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
258 add_executable(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
259 target_link_libraries(clitkImageMoment clitkCommon)
260 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment)
262 WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
263 add_executable(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
264 target_link_libraries(clitkImageStatistics clitkCommon)
265 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics)
267 WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
268 add_executable(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
269 target_link_libraries(clitkVFConvert clitkCommon )
270 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFConvert)
272 WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
273 add_executable(clitkImageToVectorImage clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
274 target_link_libraries(clitkImageToVectorImage clitkCommon)
275 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageToVectorImage)
277 WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
278 add_executable(clitkVectorImageToImage clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
279 target_link_libraries(clitkVectorImageToImage clitkCommon)
280 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage)
282 WRAP_GGO(clitkNVectorImageTo4DImage_GGO_C clitkNVectorImageTo4DImage.ggo)
283 add_executable(clitkNVectorImageTo4DImage clitkNVectorImageTo4DImage.cxx clitkNVectorImageTo4DImageGenericFilter.cxx ${clitkNVectorImageTo4DImage_GGO_C})
284 target_link_libraries(clitkNVectorImageTo4DImage clitkCommon)
285 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNVectorImageTo4DImage)
287 WRAP_GGO(clitk4DImageToNVectorImage_GGO_C clitk4DImageToNVectorImage.ggo)
288 add_executable(clitk4DImageToNVectorImage clitk4DImageToNVectorImage.cxx clitk4DImageToNVectorImageGenericFilter.cxx ${clitk4DImageToNVectorImage_GGO_C})
289 target_link_libraries(clitk4DImageToNVectorImage clitkCommon)
290 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitk4DImageToNVectorImage)
292 add_executable(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx)
293 target_link_libraries(clitkMIP clitkMIPLib clitkCommon)
294 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP)
296 WRAP_GGO(clitkSum_GGO_C clitkSum.ggo)
297 add_executable(clitkSum clitkSum.cxx ${clitkSum_GGO_C})
298 target_link_libraries(clitkSum clitkCommon)
299 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSum)
301 WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
302 add_executable(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
303 target_link_libraries(clitkTransformLandmarks clitkCommon)
304 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks)
306 WRAP_GGO(clitkMaskLandmarks_GGO_C clitkMaskLandmarks.ggo)
307 add_executable(clitkMaskLandmarks clitkMaskLandmarks.cxx ${clitkMaskLandmarks_GGO_C})
308 target_link_libraries(clitkMaskLandmarks clitkCommon)
309 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskLandmarks)
311 WRAP_GGO(clitkJacobianImage_GGO_C clitkJacobianImage.ggo)
312 add_executable(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
313 target_link_libraries(clitkJacobianImage clitkCommon)
314 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
316 WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
317 add_executable(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
318 target_link_libraries(clitkPadImage clitkCommon)
319 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
321 WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
322 add_executable(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
323 target_link_libraries(clitkCatImage clitkCommon)
324 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
326 WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
327 add_executable(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
328 clitkAnisotropicDiffusionGenericFilter.cxx
329 ${clitkAnisotropicDiffusion_GGO_C})
330 target_link_libraries(clitkAnisotropicDiffusion clitkCommon)
331 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
333 WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
334 add_executable(clitkChangeImageInfo clitkChangeImageInfo.cxx
335 clitkChangeImageInfoGenericFilter.cxx
336 ${clitkChangeImageInfo_GGO_C})
337 target_link_libraries(clitkChangeImageInfo clitkCommon)
338 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
340 WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
341 add_executable(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
342 target_link_libraries(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
343 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
345 WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
346 add_executable(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
347 target_link_libraries(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
348 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
350 WRAP_GGO(clitkNormalizeImageFilter_GGO_C clitkNormalizeImageFilter.ggo)
351 add_executable(clitkNormalizeImageFilter clitkNormalizeImageFilter.cxx ${clitkNormalizeImageFilter_GGO_C})
352 target_link_libraries(clitkNormalizeImageFilter clitkCommon )
353 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNormalizeImageFilter)
355 WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
356 add_executable(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
357 target_link_libraries(clitkImageGradientMagnitude clitkCommon )
358 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
360 WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
361 add_executable(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
362 target_link_libraries(clitkImageLaplacian clitkCommon )
363 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
365 WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
366 add_executable(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
367 target_link_libraries(clitkImageIntensityWindowing clitkCommon )
368 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
370 WRAP_GGO(clitkMaskOfIntegratedIntensity_GGO_C clitkMaskOfIntegratedIntensity.ggo)
371 add_executable(clitkMaskOfIntegratedIntensity clitkMaskOfIntegratedIntensity.cxx ${clitkMaskOfIntegratedIntensity_GGO_C})
372 target_link_libraries(clitkMaskOfIntegratedIntensity clitkCommon )
373 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskOfIntegratedIntensity)
376 WRAP_GGO(clitkBlurImage_GGO_C clitkBlurImage.ggo)
377 add_executable(clitkBlurImage clitkBlurImage.cxx ${clitkBlurImage_GGO_C})
378 target_link_libraries(clitkBlurImage clitkCommon )
379 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBlurImage)
381 #=========================================================
382 option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
384 find_package(ROOT REQUIRED)
386 message(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
389 "Cannot build without ROOT. Please set ROOTSYS environement variable.")
391 include_directories(${ROOT_INCLUDE_DIR})
392 link_directories(${ROOT_LIBRARY_DIR})
393 WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
394 add_executable(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
395 target_link_libraries(clitkMergeRootFiles ${ROOT_LIBRARIES})
396 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
398 #=========================================================
401 #=========================================================
402 if(CLITK_EXPERIMENTAL)
403 WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
404 add_executable(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
405 target_link_libraries(clitkBinaryImageToMesh clitkCommon)
406 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
408 WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
409 add_executable(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
410 target_link_libraries(clitkMeshToBinaryImage clitkCommon)
411 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
413 WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
414 add_executable(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
415 target_link_libraries(clitkMeshViewer clitkCommon)
416 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
417 endif(CLITK_EXPERIMENTAL)
418 #=========================================================
421 #=========================================================
422 WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
423 add_executable(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
424 target_link_libraries(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
425 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
427 WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
428 add_executable(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
429 target_link_libraries(clitkDicomRTPlan2Gate clitkCommon)
430 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
431 #=========================================================
434 install(TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
436 endif(CLITK_BUILD_TOOLS)