]> Creatis software - clitk.git/blob - tools/CMakeLists.txt
new tool to normalize image intensity
[clitk.git] / tools / CMakeLists.txt
1 #=========================================================
2 # Add Libraries used in vv and clitk to avoid recompilation
3 WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
4 ADD_LIBRARY(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
5
6 WRAP_GGO(clitkImageConvert_GGO_C clitkImageConvert.ggo)
7 ADD_LIBRARY(clitkImageConvertLib clitkImageConvertGenericFilter.cxx ${clitkImageConvert_GGO_C})
8
9 WRAP_GGO(clitkBinarizeImage_GGO_C clitkBinarizeImage.ggo)
10 ADD_LIBRARY(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx ${clitkBinarizeImage_GGO_C})
11
12 WRAP_GGO(clitkImageArithm_GGO_C clitkImageArithm.ggo)
13 ADD_LIBRARY(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx ${clitkImageArithm_GGO_C})
14
15 WRAP_GGO(clitkVectorArithm_GGO_C clitkVectorArithm.ggo)
16 ADD_LIBRARY(clitkVectorArithmLib clitkVectorArithmGenericFilter.cxx ${clitkVectorArithm_GGO_C})
17
18 WRAP_GGO(clitkResampleImage_GGO_C clitkResampleImage.ggo)
19 ADD_LIBRARY(clitkResampleImageLib clitkResampleImageGenericFilter.cxx ${clitkResampleImage_GGO_C})
20
21 WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo)
22 ADD_LIBRARY(clitkMIPLib clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
23
24 WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
25 ADD_LIBRARY(clitkMedianImageFilterLib clitkMedianImageGenericFilter.cxx ${clitkMedianImageFilter_GGO_C})
26
27 #=========================================================
28 IF (CLITK_BUILD_TOOLS)
29
30   WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
31   ADD_EXECUTABLE(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
32   TARGET_LINK_LIBRARIES(clitkDicomInfo clitkCommon)
33   # set_target_properties(clitkDicomInfo
34   #   PROPERTIES
35   #   LINK_INTERFACE_LIBRARIES ""
36   #   )
37   SET(TOOLS_INSTALL clitkDicomInfo)
38
39   WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
40   ADD_EXECUTABLE(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
41   TARGET_LINK_LIBRARIES(clitkDicom2Image clitkCommon)
42   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
43
44   WRAP_GGO(clitkDicomWave2Text_GGO_C clitkDicomWave2Text.ggo)
45   ADD_EXECUTABLE(clitkDicomWave2Text clitkDicomWave2Text.cxx ${clitkDicomWave2Text_GGO_C})
46   TARGET_LINK_LIBRARIES(clitkDicomWave2Text clitkCommon)
47   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomWave2Text)
48
49   WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
50   ADD_EXECUTABLE(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
51   TARGET_LINK_LIBRARIES(clitkImageInfo clitkCommon)
52   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo)
53
54   ADD_EXECUTABLE(clitkImageConvert clitkImageConvert.cxx)
55   TARGET_LINK_LIBRARIES(clitkImageConvert clitkImageConvertLib clitkCommon)
56   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageConvert)
57
58   ADD_EXECUTABLE(clitkBinarizeImage clitkBinarizeImage.cxx)
59   TARGET_LINK_LIBRARIES(clitkBinarizeImage clitkBinarizeImageLib clitkCommon)
60   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinarizeImage)
61
62   WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo)
63   ADD_EXECUTABLE(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
64   TARGET_LINK_LIBRARIES(clitkVFResample clitkCommon)
65   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFResample)
66
67   WRAP_GGO(clitkVFInterpolate_GGO_C clitkVFInterpolate.ggo)
68   ADD_EXECUTABLE(clitkVFInterpolate clitkVFInterpolate.cxx clitkVFInterpolateGenericFilter.cxx ${clitkVFInterpolate_GGO_C})
69   TARGET_LINK_LIBRARIES(clitkVFInterpolate clitkCommon)
70   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFInterpolate)
71
72   WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
73   ADD_EXECUTABLE(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
74   TARGET_LINK_LIBRARIES(clitkImageCreate clitkCommon)
75   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageCreate)
76
77   WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
78   ADD_EXECUTABLE(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
79   TARGET_LINK_LIBRARIES(clitkZeroVF clitkCommon)
80   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkZeroVF)
81
82   WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
83   ADD_EXECUTABLE(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
84   TARGET_LINK_LIBRARIES(clitkSplitImage clitkCommon )
85   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSplitImage)
86
87   WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
88   ADD_EXECUTABLE(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
89   TARGET_LINK_LIBRARIES(clitkWriteDicomSeries clitkCommon )
90   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries)
91
92   WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
93   ADD_EXECUTABLE(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
94     ${clitkMedianTemporalDimension_GGO_C})
95   TARGET_LINK_LIBRARIES(clitkMedianTemporalDimension clitkCommon )
96   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianTemporalDimension)
97
98   WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
99   ADD_EXECUTABLE(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
100   TARGET_LINK_LIBRARIES(clitkWarpImage clitkCommon)
101   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWarpImage)
102
103   WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
104   ADD_EXECUTABLE(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
105   TARGET_LINK_LIBRARIES(clitkInvertVF clitkCommon)
106   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkInvertVF)
107
108   WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo)
109   ADD_EXECUTABLE(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
110   TARGET_LINK_LIBRARIES(clitkAffineTransform clitkCommon )
111   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform)
112
113   WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo)
114   ADD_EXECUTABLE(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C})
115   TARGET_LINK_LIBRARIES(clitkElastixTransformToMatrix clitkCommon )
116   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix)
117
118   WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo)
119   ADD_EXECUTABLE(clitkMatrixToElastixTransform clitkMatrixToElastixTransform.cxx ${clitkMatrixToElastixTransform_GGO_C})
120   TARGET_LINK_LIBRARIES(clitkMatrixToElastixTransform clitkCommon )
121   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixToElastixTransform)
122
123   WRAP_GGO(clitkMatrixInverse_GGO_C clitkMatrixInverse.ggo)
124   ADD_EXECUTABLE(clitkMatrixInverse clitkMatrixInverse.cxx ${clitkMatrixInverse_GGO_C})
125   TARGET_LINK_LIBRARIES(clitkMatrixInverse clitkCommon )
126   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixInverse)
127
128   WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
129   ADD_EXECUTABLE(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
130   TARGET_LINK_LIBRARIES(clitkSetBackground clitkCommon)
131   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground)
132
133   WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
134   ADD_EXECUTABLE(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
135   TARGET_LINK_LIBRARIES(clitkGammaIndex clitkCommon)
136   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
137
138   ADD_EXECUTABLE(clitkImageArithm clitkImageArithm.cxx)
139   TARGET_LINK_LIBRARIES(clitkImageArithm clitkImageArithmImageLib clitkCommon )
140   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageArithm)
141
142   ADD_EXECUTABLE(clitkVectorArithm clitkVectorArithm.cxx)
143   TARGET_LINK_LIBRARIES(clitkVectorArithm clitkVectorArithmLib clitkCommon )
144   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorArithm)
145
146   WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
147   ADD_EXECUTABLE(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
148   TARGET_LINK_LIBRARIES(clitkUnsharpMask clitkCommon )
149   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
150
151   WRAP_GGO(clitkFooImage_GGO_C clitkFooImage.ggo)
152   ADD_EXECUTABLE(clitkFooImage clitkFooImage.cxx ${clitkFooImage_GGO_C})
153   TARGET_LINK_LIBRARIES(clitkFooImage clitkCommon )
154   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFooImage)
155
156   WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
157   ADD_EXECUTABLE(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
158   TARGET_LINK_LIBRARIES(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
159   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
160
161   ADD_EXECUTABLE(clitkResampleImage clitkResampleImage.cxx)
162   TARGET_LINK_LIBRARIES(clitkResampleImage clitkResampleImageLib clitkCommon)
163   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkResampleImage)
164
165   WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
166   ADD_EXECUTABLE(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
167   TARGET_LINK_LIBRARIES(clitkMinMaxMask clitkCommon  )
168   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMinMaxMask)
169
170   WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
171   ADD_EXECUTABLE(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
172   TARGET_LINK_LIBRARIES(clitkAutoCrop clitkCommon )
173   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
174
175   WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
176   ADD_EXECUTABLE(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
177   TARGET_LINK_LIBRARIES(clitkDicomRTStruct2Image clitkDicomRTStruct)
178   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
179
180   IF(CLITK_USE_SYSTEM_GDCM)
181     WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
182     ADD_EXECUTABLE(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
183     TARGET_LINK_LIBRARIES(clitkImage2DicomRTStruct clitkDicomRTStruct)
184   ENDIF()
185
186   WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
187   ADD_EXECUTABLE(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
188   TARGET_LINK_LIBRARIES(clitkComposeVF clitkCommon  )
189   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkComposeVF)
190
191   WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
192   ADD_EXECUTABLE(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
193   TARGET_LINK_LIBRARIES(clitkMergeSequence clitkCommon)
194   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeSequence)
195
196   WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
197   ADD_EXECUTABLE(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
198   TARGET_LINK_LIBRARIES(clitkBackProjectImage clitkCommon)
199   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBackProjectImage)
200
201   ADD_EXECUTABLE(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
202   TARGET_LINK_LIBRARIES(clitkCropImage clitkCropImageLib clitkCommon)
203   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCropImage)
204
205   # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
206   # ADD_EXECUTABLE(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
207   # TARGET_LINK_LIBRARIES(clitkExtractSlice clitkCommon)
208   #SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
209
210   WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
211   ADD_EXECUTABLE(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
212   TARGET_LINK_LIBRARIES(clitkFlipImage clitkCommon)
213   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFlipImage)
214
215   WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
216   ADD_EXECUTABLE(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
217   TARGET_LINK_LIBRARIES(clitkMirrorPadImage clitkCommon)
218   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMirrorPadImage)
219
220   WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
221   ADD_EXECUTABLE(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
222   TARGET_LINK_LIBRARIES(clitkImageMoment clitkCommon)
223   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment)
224
225   WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
226   ADD_EXECUTABLE(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
227   TARGET_LINK_LIBRARIES(clitkImageStatistics clitkCommon)
228   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics)
229
230   WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
231   ADD_EXECUTABLE(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
232   TARGET_LINK_LIBRARIES(clitkVFConvert clitkCommon )
233   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFConvert)
234
235   WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
236   ADD_EXECUTABLE(clitkImageToVectorImage  clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
237   TARGET_LINK_LIBRARIES(clitkImageToVectorImage  clitkCommon)
238   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageToVectorImage)
239
240   WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
241   ADD_EXECUTABLE(clitkVectorImageToImage  clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
242   TARGET_LINK_LIBRARIES(clitkVectorImageToImage  clitkCommon)
243   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage)
244
245   ADD_EXECUTABLE(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx)
246   TARGET_LINK_LIBRARIES(clitkMIP clitkMIPLib clitkCommon)
247   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP)
248
249   WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
250   ADD_EXECUTABLE(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
251   TARGET_LINK_LIBRARIES(clitkTransformLandmarks clitkCommon)
252   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks)
253
254   WRAP_GGO(clitkMaskLandmarks_GGO_C clitkMaskLandmarks.ggo)
255   ADD_EXECUTABLE(clitkMaskLandmarks clitkMaskLandmarks.cxx ${clitkMaskLandmarks_GGO_C})
256   TARGET_LINK_LIBRARIES(clitkMaskLandmarks clitkCommon)
257   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskLandmarks)
258
259   WRAP_GGO(clitkJacobianImage_GGO_C clitkJacobianImage.ggo)
260   ADD_EXECUTABLE(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
261   TARGET_LINK_LIBRARIES(clitkJacobianImage clitkCommon)
262   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
263
264   WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
265   ADD_EXECUTABLE(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
266   TARGET_LINK_LIBRARIES(clitkPadImage clitkCommon)
267   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
268
269   WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
270   ADD_EXECUTABLE(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
271   TARGET_LINK_LIBRARIES(clitkCatImage clitkCommon)
272   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
273
274   WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
275   ADD_EXECUTABLE(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
276     clitkAnisotropicDiffusionGenericFilter.cxx
277     ${clitkAnisotropicDiffusion_GGO_C})
278   TARGET_LINK_LIBRARIES(clitkAnisotropicDiffusion clitkCommon)
279   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
280
281   WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
282   ADD_EXECUTABLE(clitkChangeImageInfo clitkChangeImageInfo.cxx
283     clitkChangeImageInfoGenericFilter.cxx
284     ${clitkChangeImageInfo_GGO_C})
285   TARGET_LINK_LIBRARIES(clitkChangeImageInfo clitkCommon)
286   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
287
288   WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
289   ADD_EXECUTABLE(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
290   TARGET_LINK_LIBRARIES(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
291   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
292
293   WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
294   ADD_EXECUTABLE(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
295   TARGET_LINK_LIBRARIES(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
296   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
297
298   WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
299   ADD_EXECUTABLE(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
300   TARGET_LINK_LIBRARIES(clitkImageGradientMagnitude clitkCommon )
301   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
302
303   WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
304   ADD_EXECUTABLE(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
305   TARGET_LINK_LIBRARIES(clitkImageLaplacian clitkCommon )
306   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
307
308   WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
309   ADD_EXECUTABLE(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
310   TARGET_LINK_LIBRARIES(clitkImageIntensityWindowing clitkCommon )
311   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
312
313
314   #=========================================================
315   option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
316   if (CLITK_USE_ROOT)
317     FIND_PACKAGE(ROOT REQUIRED)
318     if(ROOT_FOUND)
319       MESSAGE(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
320     ELSE(ROOT_FOUND)
321       MESSAGE(FATAL_ERROR
322         "Cannot build without ROOT.  Please set ROOTSYS environement variable.")
323     endif(ROOT_FOUND)
324     INCLUDE_DIRECTORIES(${ROOT_INCLUDE_DIR})
325     LINK_DIRECTORIES(${ROOT_LIBRARY_DIR})
326     WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
327     ADD_EXECUTABLE(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
328     TARGET_LINK_LIBRARIES(clitkMergeRootFiles ${ROOT_LIBRARIES})
329     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
330   endif()
331   #=========================================================
332
333
334   #=========================================================
335   IF(CLITK_EXPERIMENTAL)
336     WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
337     ADD_EXECUTABLE(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
338     TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh clitkCommon)
339     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
340
341     WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
342     ADD_EXECUTABLE(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
343     TARGET_LINK_LIBRARIES(clitkMeshToBinaryImage clitkCommon)
344     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
345
346     WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
347     ADD_EXECUTABLE(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
348     TARGET_LINK_LIBRARIES(clitkMeshViewer clitkCommon)
349     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
350   ENDIF(CLITK_EXPERIMENTAL)
351   #=========================================================
352
353
354   #=========================================================
355   IF(ITK_VERSION_MAJOR VERSION_LESS 4)
356     MESSAGE("clitkDice is not compatible with ITK<4. It will not be built.")
357     MESSAGE("clitkDicomRTPlan2Gate is not compatible with GDCM<2 (ITK<4). It will not be built.")
358   ELSE(ITK_VERSION_MAJOR VERSION_LESS 4)
359     WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
360     ADD_EXECUTABLE(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
361     TARGET_LINK_LIBRARIES(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
362     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
363
364     WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
365     ADD_EXECUTABLE(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
366     TARGET_LINK_LIBRARIES(clitkDicomRTPlan2Gate clitkCommon)
367     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
368   ENDIF(ITK_VERSION_MAJOR VERSION_LESS 4)
369   #=========================================================
370
371
372   INSTALL (TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
373
374 ENDIF(CLITK_BUILD_TOOLS)