1 /*=========================================================================
2 Program: vv http://www.creatis.insa-lyon.fr/rio/vv
5 - University of LYON http://www.universite-lyon.fr/
6 - Léon Bérard cancer center http://www.centreleonberard.fr
7 - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
9 This software is distributed WITHOUT ANY WARRANTY; without even
10 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11 PURPOSE. See the copyright notices for more information.
13 It is distributed under dual licence
15 - BSD See included LICENSE.txt file
16 - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
17 ===========================================================================**/
19 #include "clitkImageCommon.h"
21 //--------------------------------------------------------------------
22 template<class ArgsInfoType>
23 clitk::AutoCropGenericFilter<ArgsInfoType>::AutoCropGenericFilter():
24 ImageToImageGenericFilter<Self>("AutoCrop")
27 cmdline_parser_clitkAutoCrop_init(&mArgsInfo);
28 //InitializeImageType<2>();
29 InitializeImageType<3>();
30 //InitializeImageType<4>();
32 //--------------------------------------------------------------------
35 //--------------------------------------------------------------------
36 template<class ArgsInfoType>
37 template<unsigned int Dim>
38 void clitk::AutoCropGenericFilter<ArgsInfoType>::InitializeImageType()
40 // ADD_DEFAULT_IMAGE_TYPES(Dim);
41 ADD_IMAGE_TYPE(Dim, uchar);
42 ADD_IMAGE_TYPE(Dim, ushort);
43 // ADD_IMAGE_TYPE(Dim, uint);
44 // ADD_IMAGE_TYPE(Dim, ulong);
45 // ADD_IMAGE_TYPE(Dim, int);
46 // ADD_IMAGE_TYPE(Dim, float);
48 //--------------------------------------------------------------------
51 //--------------------------------------------------------------------
52 template<class ArgsInfoType>
53 void clitk::AutoCropGenericFilter<ArgsInfoType>::SetArgsInfo(const ArgsInfoType & a)
56 SetIOVerbose(mArgsInfo.verbose_flag);
57 if (mArgsInfo.imagetypes_flag) this->PrintAvailableImageTypes();
58 if (mArgsInfo.input_given) AddInputFilename(mArgsInfo.input_arg);
59 if (mArgsInfo.output_given) AddOutputFilename(mArgsInfo.output_arg);
61 //--------------------------------------------------------------------
64 //--------------------------------------------------------------------
65 // Update with the number of dimensions and the pixeltype
66 //--------------------------------------------------------------------
67 template<class ArgsInfoType>
68 template<class ImageType>
69 void clitk::AutoCropGenericFilter<ArgsInfoType>::UpdateWithInputImageType()
72 typename ImageType::Pointer input = this->template GetInput<ImageType>(0);
75 typedef clitk::AutoCropFilter<ImageType> FilterType;
76 typename FilterType::Pointer filter = FilterType::New();
79 filter->SetBackgroundValue(mArgsInfo.BG_arg);
80 filter->SetInput(input);
86 typename ImageType::Pointer output = filter->GetOutput();
87 this->template SetNextOutput<ImageType>(output);
89 //--------------------------------------------------------------------