1 /*=========================================================================
2 Program: vv http://www.creatis.insa-lyon.fr/rio/vv
5 - University of LYON http://www.universite-lyon.fr/
6 - Léon Bérard cancer center http://www.centreleonberard.fr
7 - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
9 This software is distributed WITHOUT ANY WARRANTY; without even
10 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11 PURPOSE. See the copyright notices for more information.
13 It is distributed under dual licence
15 - BSD See included LICENSE.txt file
16 - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
17 ===========================================================================**/
18 #ifndef __clitkComposeVFGenericFilter_txx
19 #define __clitkComposeVFGenericFilter_txx
20 #include "clitkComposeVFGenericFilter.h"
22 #include "clitkConvertBLUTCoeffsToVFFilter.h"
27 template<unsigned int Dimension>
28 void ComposeVFGenericFilter::UpdateWithDim(std::string PixelType)
30 if (PixelType=="double")
32 UpdateWithDimAndPixelType<Dimension, double>();
36 UpdateWithDimAndPixelType<Dimension, float>();
41 template<unsigned int Dimension, class PixelType>
42 void ComposeVFGenericFilter::UpdateWithDimAndPixelType()
44 typedef itk::Vector<PixelType, Dimension> DisplacementType;
45 typedef itk::Image<DisplacementType, Dimension> ImageType;
46 typename ImageType::Pointer input1, input2;
48 //Define the image type
50 typedef ConvertBLUTCoeffsToVFFilter<ImageType> VFFilterType;
51 typename VFFilterType::Pointer vf_filter = VFFilterType::New();
52 vf_filter->SetInputFileName(m_InputName1);
53 vf_filter->SetLikeFileName(m_LikeImage);
54 vf_filter->SetVerbose(m_Verbose);
56 input1 = vf_filter->GetOutput();
58 vf_filter->SetInputFileName(m_InputName2);
60 input2 = vf_filter->GetOutput();
64 typedef itk::ImageFileReader<ImageType> ImageReaderType;
65 typename ImageReaderType::Pointer reader1= ImageReaderType::New();
66 reader1->SetFileName(m_InputName1);
68 input1 =reader1->GetOutput();
71 typename ImageReaderType::Pointer reader2= ImageReaderType::New();
72 reader2->SetFileName(m_InputName2);
74 input2=reader2->GetOutput();
77 //Create the ComposeVFFilter
78 typedef clitk::ComposeVFFilter<ImageType,ImageType> FilterType;
79 typename FilterType::Pointer filter =FilterType::New();
80 filter->SetInput1(input1);
81 filter->SetInput2(input2);
82 filter->SetVerbose(m_Verbose);
86 typedef itk::ImageFileWriter<ImageType> WriterType;
87 typename WriterType::Pointer writer = WriterType::New();
88 writer->SetFileName(m_OutputName);
89 writer->SetInput(filter->GetOutput());