1 /*=========================================================================
2 Program: vv http://www.creatis.insa-lyon.fr/rio/vv
5 - University of LYON http://www.universite-lyon.fr/
6 - Léon Bérard cancer center http://www.centreleonberard.fr
7 - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
9 This software is distributed WITHOUT ANY WARRANTY; without even
10 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11 PURPOSE. See the copyright notices for more information.
13 It is distributed under dual licence
15 - BSD See included LICENSE.txt file
16 - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
17 ===========================================================================**/
18 #ifndef clitkImageStatisticsGenericFilter_cxx
19 #define clitkImageStatisticsGenericFilter_cxx
21 #include "clitkImageStatisticsGenericFilter.h"
27 //-----------------------------------------------------------
29 //-----------------------------------------------------------
30 ImageStatisticsGenericFilter::ImageStatisticsGenericFilter()
37 //-----------------------------------------------------------
39 //-----------------------------------------------------------
40 void ImageStatisticsGenericFilter::Update()
42 // Read the Dimension and PixelType
43 int Dimension, Components;
44 std::string PixelType;
45 ReadImageDimensionAndPixelType(m_InputFileName, Dimension, PixelType, Components);
47 if (m_ArgsInfo.channel_arg < -1 || m_ArgsInfo.channel_arg >= Components) {
48 std::cout << "Invalid image channel" << std::endl;
52 if (m_ArgsInfo.mask_given) {
53 int maskDimension, maskComponents;
54 std::string maskPixelType;
55 ReadImageDimensionAndPixelType(m_ArgsInfo.mask_arg, maskDimension, maskPixelType, maskComponents);
56 if (!(maskDimension == Dimension || maskDimension == (Dimension - 1))) {
57 std::cout << "Dimension of label mask must be equal to the (d)imension of the input image or d-1." << std::endl;
67 UpdateWithDim<2,1>(PixelType);
70 UpdateWithDim<2,2>(PixelType);
73 UpdateWithDim<2,3>(PixelType);
76 std::cout << "Unsupported number of channels" << std::endl;
80 else if (Dimension==3) {
83 UpdateWithDim<3,1>(PixelType);
86 UpdateWithDim<3,2>(PixelType);
89 UpdateWithDim<3,3>(PixelType);
92 std::cout << "Unsupported number of channels" << std::endl;
96 else if (Dimension==4) {
99 UpdateWithDim<4,1>(PixelType);
102 UpdateWithDim<4,2>(PixelType);
105 UpdateWithDim<4,3>(PixelType);
108 std::cout << "Unsupported number of channels" << std::endl;
113 std::cout<<"Error, Only for 2 or 3 Dimensions!!!"<<std::endl ;
121 #endif //#define clitkImageStatisticsGenericFilter_cxx