1 # file clitkScintivolStats.ggo
2 package "clitkScintivolStats"
4 purpose "Convert an image into another image.\n\tAllow to change the file format and/or the pixel type. \n\tKnown file formats 2D: jpeg png bmp tif mhd hdr vox dcm \n\tKnown file formats 3D: mhd vox hdr dcm\n\tKnown file formats 4D: mhd \n\tKnown images: 2D 3D or 4D, schar, uchar, short, ushort, int, float and double\n\nIf the -o option is not given, the last parameter of the command line is used as output."
6 option "config" - "Config file" string no
7 option "output" o "Output .csv filename" string yes
8 option "append" - "Append results to .csv file (eg: for scatter)" flag off
10 option "dynamic1" - "Dynamique 1 filename (geometrical mean)" string yes
11 option "frameDurationDynamic1" - "Frame duration for dynamique 1" double yes
12 option "heartMask" - "Heart mask filename" string yes
13 option "liverMask" - "Liver mask filename" string yes
15 option "dynamic2" - "Dynamique 2 filename (geometrical mean)" string yes
16 option "frameDurationDynamic2" - "Frame duration for dynamique 2" double yes
17 option "acquisitionTimeDynamic2" - "Start acquisition time of the dynamic2 after dynamic1" double yes
18 option "parenchymaMask" - "Parenchyma mask filename" string yes
20 option "tomo" - "Tomo image filename" string yes
21 option "acquisitionTimeTomo" - "Acquisition time for tomo" double yes
22 option "totalLiverMask" - "Total liver mask filename" string yes
23 option "remnantLiverMask" - "Remnant liver mask filename" string yes