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Add clitkImage2DicomSeries tool to write a Dicom Series from an image without a corre...
[clitk.git] / vv / CMakeLists.txt
1 cmake_minimum_required(VERSION 2.4)
2
3 #=========================================================
4 # To avoid warning with some version
5 if(COMMAND cmake_policy)
6   cmake_policy(SET CMP0003 NEW)
7   cmake_policy(SET CMP0007 NEW)
8 endif(COMMAND cmake_policy)
9 #=========================================================
10
11
12 #=========================================================
13 #List of vv tools to compile
14 set(vv_TOOLS
15   vvToolMedianFilter
16   vvToolRigidReg
17   vvToolCropImage
18   vvToolBinarize
19   vvToolImageArithm
20   vvToolResample
21   vvToolMIP
22   vvToolConvert ## with dummy vvToolConvert.ui
23   vvToolROIManager
24   vvToolSegmentation
25   vvToolProfile
26   ## these ones are for tests (not working)
27   # vvToolTest
28   # vvToolFoo
29   # vvToolFooWithWidgetBase
30   # vvToolPlastimatch
31   # vvToolConnectedComponentLabeling
32   ## these ones are old ones
33   # vvToolExtractPatient
34   # vvToolExtractLung
35   # vvToolStructureSetManager
36 )
37 # dependencies of the tools
38 # Future issues : when tool depend on other tools ... how to manage that ?
39 #  >> add the relevant $_LIBS variable to the tool that has dependencies?
40 set(vvToolBinarize_LIBS clitkBinarizeImageLib)
41 set(vvToolProfile_LIBS clitkProfileImageLib)
42 set(vvToolResample_LIBS clitkResampleImageLib)
43 set(vvToolConvert_LIBS clitkImageConvertLib)
44 set(vvToolExtractPatient_LIBS clitkSegmentationGgoLib)
45 set(vvToolExtractLung_LIBS clitkSegmentationGgoLib)
46 set(vvToolCropImage_LIBS clitkCropImageLib)
47 set(vvToolMIP_LIBS clitkMIPLib)
48 set(vvToolMedianFilter_LIBS clitkMedianImageFilterLib)
49 set(vvToolImageArithm_LIBS clitkImageArithmImageLib)
50 set(vvToolROIManager_LIBS clitkDicomRTStruct)
51
52 #=========================================================
53 # List of vv source files
54
55 # in COMMON_WITH_UI -> must have .h and .cxx and .ui
56 set(vv_COMMON_WITH_UI
57   vvInfoPanel
58   vvMainWindow
59   vvLinkPanel
60   vvOverlayPanel
61   vvLandmarksPanel
62   vvProgressDialog
63   vvSegmentationDialog
64   vvSurfaceViewerDialog
65   vvDeformationDialog
66   vvStructSelector
67   vvIntensityValueSlider
68   vvLabelImageLoaderWidget
69   vvToolWidgetBase
70   vvToolSimpleInputSelectorWidget
71   vvToolInputSelectorWidget
72   vvRegisterForm
73 )
74
75 # All others sources
76 set(vv_SRCS
77   vvQProgressDialogITKCommand.cxx
78   vvQDicomSeriesSelector.cxx
79   QTreePushButton.cxx
80   vvMainWindowBase.cxx
81   vvImageWarp.cxx
82   vvDeformableRegistration.cxx
83   vtkVOXImageWriter.cxx
84   vvInteractorStyleNavigator.cxx
85   vvSlicer.cxx
86   vvLandmarks.cxx
87   vvLandmarksGlyph.cxx
88   vvClipPolyData.cxx
89   vvGlyphSource.cxx
90   vvGlyph2D.cxx
91   vvSlicerManager.cxx
92   vvSlicerManagerCommand.cxx
93   vvUtils.cxx
94 #  vvMaximumIntensityProjection.cxx
95   vvMesh.cxx
96   vvMeshActor.cxx
97   vvMeshReader.cxx
98   vvMidPosition.cxx
99   vvImageContour.cxx
100   vvBinaryImageOverlayActor.cxx
101   vvStructureSetActor.cxx
102   vvSaveState.cxx
103   vvReadState.cxx
104   vvROIActor.cxx
105   vvBlendImageActor.cxx
106   vvToolManager.cxx
107   vvToolCreatorBase.cxx
108   vvToolBaseBase.cxx
109 )
110
111 #=========================================================
112 # Qt related commands
113
114 if(vv_QT_VERSION VERSION_GREATER "4")
115   find_package(Qt5Widgets REQUIRED)
116   find_package(Qt5Network REQUIRED)
117   find_package(Qt5Designer REQUIRED)
118 else()
119   find_package(Qt4 REQUIRED)
120 endif()
121
122 if(vv_QT_VERSION VERSION_GREATER "4")
123   link_directories(${QT5Widgets_LIBRARIES})
124   link_directories(${QT5Network_LIBRARIES})
125   link_directories(${QT5Designer_LIBRARIES})
126 else()
127   link_directories(${QT_LIBRARY_DIR})
128 endif()
129
130 if(vv_QT_VERSION VERSION_GREATER "4")
131   qt5_wrap_cpp(vv_SRCS
132     vvMainWindowBase.h
133     QTreePushButton.h
134     vvDocumentation.h
135     vvHelpDialog.h
136     vvQDicomSeriesSelector.h
137     vvSlicerManager.h
138     vvSlicer.h
139     vvStructureSetActor.h
140     vvROIActor.h
141     vvToolCreatorBase.h
142     )
143 else()
144   QT4_WRAP_CPP(vv_SRCS
145     vvMainWindowBase.h
146     QTreePushButton.h
147     vvDocumentation.h
148     vvHelpDialog.h
149     vvQDicomSeriesSelector.h
150     vvSlicerManager.h
151     vvSlicer.h
152     vvStructureSetActor.h
153     vvROIActor.h
154     vvToolCreatorBase.h
155     )
156 endif()
157
158 if(vv_QT_VERSION VERSION_GREATER "4")
159   qt5_wrap_ui(vv_UI_CXX
160     qt_ui/vvHelpDialog.ui
161     qt_ui/vvDocumentation.ui
162     qt_ui/vvDicomSeriesSelector.ui
163     qt_ui/vvDummyWindow.ui #For testing
164     )
165 else()
166   QT4_WRAP_UI(vv_UI_CXX
167     qt_ui/vvHelpDialog.ui
168     qt_ui/vvDocumentation.ui
169     qt_ui/vvDicomSeriesSelector.ui
170     qt_ui/vvDummyWindow.ui #For testing
171     )
172 endif()
173
174 if(vv_QT_VERSION VERSION_GREATER "4")
175   QT5_add_resources(vv_SRCS vvIcons.qrc)
176 else()
177   QT4_ADD_RESOURCES(vv_SRCS vvIcons.qrc)
178 endif()
179   
180   # Add the autotools in the header vvToolsList.h for initialization of the dummy
181   # variables in vv.cxx for the tools contained in vvLib
182   if(${CMAKE_CURRENT_SOURCE_DIR}/CMakeLists.txt IS_NEWER_THAN ${CMAKE_CURRENT_BINARY_DIR}/vvToolsList.h)
183     file(REMOVE ${CMAKE_CURRENT_BINARY_DIR}/vvToolsList.h)
184     foreach(tool ${vv_TOOLS})
185       file(APPEND ${CMAKE_CURRENT_BINARY_DIR}/vvToolsList.h "#include \"${tool}.h\"\n")
186       file(APPEND ${CMAKE_CURRENT_BINARY_DIR}/vvToolsList.h "extern const vvToolCreator<${tool}> *dummy${tool};\n")
187       file(APPEND ${CMAKE_CURRENT_BINARY_DIR}/vvToolsList.h "const vvToolCreator<${tool}> *dummy${tool}2 = dummy${tool};\n\n")
188     endforeach(tool)
189   endif(${CMAKE_CURRENT_SOURCE_DIR}/CMakeLists.txt IS_NEWER_THAN ${CMAKE_CURRENT_BINARY_DIR}/vvToolsList.h)
190   
191   # Add the autotools and the common files ui
192   foreach(tool ${vv_TOOLS} ${vv_COMMON_WITH_UI})
193       set(vv_SRCS ${vv_SRCS} ${tool}.cxx)
194       if(vv_QT_VERSION VERSION_GREATER "4")
195         QT5_WRAP_CPP(vv_SRCS ${tool}.h)
196         QT5_WRAP_UI(vv_UI_CXX qt_ui/${tool}.ui)
197       else()
198         QT4_WRAP_CPP(vv_SRCS ${tool}.h)
199         QT4_WRAP_UI(vv_UI_CXX qt_ui/${tool}.ui)
200       endif()
201   endforeach(tool)
202   
203   # Add the common source files
204   foreach(tool ${vv_COMMON})
205       set(vv_SRCS ${vv_SRCS} ${tool}.cxx)
206       if(vv_QT_VERSION VERSION_GREATER "4")
207         QT5_WRAP_CPP(vv_SRCS ${tool}.h)
208       else()
209         QT4_WRAP_CPP(vv_SRCS ${tool}.h)
210       endif()
211   endforeach(tool)
212   
213   # if Windows and Qt was built as a static lib then don't set QT_DLL flag
214   set(QT_STATIC 0)
215   if(WIN32)
216     if(vv_QT_VERSION VERSION_GREATER "4")
217       if(EXISTS ${Qt5Widgets_LIBRARIES}/QtCore.prl)
218         file(READ ${Qt5Widgets_LIBRARIES}/QtCore.prl QT_CORE_PRL)
219         if(${QT_CORE_PRL} MATCHES "static")
220           set(QT_STATIC 1)
221         endif(${QT_CORE_PRL} MATCHES "static")
222       endif(EXISTS ${Qt5Widgets_LIBRARIES}/QtCore.prl)
223     else()
224       if(EXISTS ${QT_LIBRARY_DIR}/QtCore.prl)
225         file(READ ${QT_LIBRARY_DIR}/QtCore.prl QT_CORE_PRL)
226         if(${QT_CORE_PRL} MATCHES "static")
227           set(QT_STATIC 1)
228         endif(${QT_CORE_PRL} MATCHES "static")
229       endif(EXISTS ${QT_LIBRARY_DIR}/QtCore.prl)
230     endif()
231   endif(WIN32)
232   if(NOT QT_STATIC)
233     add_definitions(-DQT_DLL)
234   endif(NOT QT_STATIC)
235
236   add_definitions(-DQT_THREAD_SUPPORT)
237   if(vv_QT_VERSION VERSION_GREATER "4")
238     include_directories(
239       ${Qt5Widgets_INCLUDE_DIRS}
240       ${Qt5Gui_INCLUDE_DIRS}
241       ${Qt5Core_INCLUDE_DIRS}
242       ${Qt5Network_INCLUDE_DIRS}
243       ${Qt5Designer_INCLUDE_DIRS}
244       ${CMAKE_CURRENT_BINARY_DIR}
245       ${CMAKE_CURRENT_SOURCE_DIR}
246     )
247   else()
248     include_directories(
249       ${QT_INCLUDES}
250       ${QT_INCLUDE_DIR}
251       ${QT_QTGUI_INCLUDE_DIR}
252       ${QT_QTCORE_INCLUDE_DIR}
253       ${CMAKE_CURRENT_BINARY_DIR}
254       ${CMAKE_CURRENT_SOURCE_DIR}
255     )
256   endif()
257 #=========================================================
258
259 #=========================================================
260 #support for parallel deformable registration with OpenMP
261 if(NOT APPLE)
262 if(CMAKE_COMPILER_IS_GNUCC)
263   set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -fopenmp")
264 endif(CMAKE_COMPILER_IS_GNUCC)
265 endif(NOT APPLE)
266 #=========================================================
267
268 #=========================================================
269 include_directories(
270   ../common
271   ../tools
272   ../segmentation
273   )
274
275 #=========================================================
276 #Add each tool's dependencies
277 foreach(tool ${vv_TOOLS})
278   set(toolLibs ${toolLibs} ${${tool}_LIBS})
279 endforeach(tool)
280
281 #=========================================================
282 #Add Foundation Libraries (this should be after our libraries, since we depend
283 #on them)
284 if(VTK_VERSION VERSION_GREATER "6.2.0")
285 set(foundationLibraries clitkCommon ${ITK_LIBRARIES} ${VTK_LIBRARIES})
286 else()
287 set(foundationLibraries clitkCommon ${ITK_LIBRARIES} QVTK vtkHybrid)
288 endif()
289
290 #=========================================================
291 # Use CxImage to create animated gifs
292 if(CLITK_EXPERIMENTAL)
293   set(vvCxImage clitkCxImage)
294   set(vv_SRCS ${vv_SRCS} vvAnimatedGIFWriter.cxx)
295   include_directories(${CLITK_SOURCE_DIR}/utilities/CxImage)
296   add_subdirectory(${CLITK_SOURCE_DIR}/utilities/CxImage ${PROJECT_BINARY_DIR}/utilities/CxImage)
297 endif(CLITK_EXPERIMENTAL)
298 #=========================================================
299
300 #-----------------------------------------------------------------------------
301 # Avoid linker bug in Mac OS 10.5
302 # See http://wiki.finkproject.org/index.php/Fink:Packaging:Preparing_for_10.5#OpenGL_Bug
303 #
304 if(APPLE)
305   find_library(CoreFoundation_LIBRARY CoreFoundation REQUIRED)
306   find_library(ApplicationServices_LIBRARY ApplicationServices REQUIRED)
307   find_library(SystemConfiguration_LIBRARY SystemConfiguration REQUIRED)
308   find_library(Security_LIBRARY Security REQUIRED)
309   set(APPLE_FRAMEWORKS ${CoreFoundation_LIBRARY}
310     ${ApplicationServices_LIBRARY}
311     ${SystemConfiguration_LIBRARY}
312     ${Security_LIBRARY}
313     )
314   message(STATUS "===== ${APPLE_FRAMEWORKS}")
315 endif()
316 #=========================================================
317 #Create binary and libs for tests
318 if(vv_QT_VERSION VERSION_GREATER "4")
319 set(vvExternalLibs clitkSegmentationGgoLib ${toolLibs} ${foundationLibraries} ${vvCxImage} Qt5::Widgets Qt5::Network Qt5::Designer ${APPLE_FRAMEWORKS})
320 else()
321 set(vvExternalLibs clitkSegmentationGgoLib ${toolLibs} ${foundationLibraries} ${vvCxImage} ${QT_LIBRARIES} ${APPLE_FRAMEWORKS})
322 endif()
323 # QtNetwork is required by vvRegisterForm ${QT_QTNETWORK_LIBRARY}
324
325 #-----------------------------------------------------------------------------
326 # For retina displays, see
327 # http://public.kitware.com/pipermail/vtkusers/2015-February/090117.html
328 if(APPLE)
329   set(vv_SRCS ${vv_SRCS} vvOSXHelper.mm)
330 endif()
331
332 add_library(vvLib ${vv_SRCS} ${vv_UI_CXX})
333 target_link_libraries(vvLib ${vvExternalLibs})
334
335 if(WIN32)
336   add_executable(vv WIN32 vv.cxx vvIcon.rc)
337 else(WIN32)
338   add_executable(vv vv.cxx)
339 endif(WIN32)
340
341 target_link_libraries(vv vvLib)
342
343 #=========================================================
344 # Install options (also used by CPack)
345 install(TARGETS vv DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
346
347 #=========================================================
348
349 #=========================================================
350 # CPack options
351 set(CPACK_PACKAGE_NAME "vv")
352 set(CPACK_SOURCE_PACKAGE_FILE_NAME "vv-src")
353 set(CPACK_PACKAGE_DESCRIPTION_SUMMARY "vv, the 4D slicer : let's jump into a new dimension !")
354 set(CPACK_PACKAGE_VENDOR "Creatis-CLB")
355 set(CPACK_PACKAGE_DESCRIPTION_FILE "${CMAKE_CURRENT_SOURCE_DIR}/ReadMe.txt")
356 set(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/License.txt")
357 set(CPACK_PACKAGE_VERSION_MAJOR "1")
358 set(CPACK_PACKAGE_VERSION_MINOR "3")
359 set(CPACK_PACKAGE_VERSION_PATCH "0")
360 if(NIGHTLY)
361   set(CPACK_PACKAGE_INSTALL_DIRECTORY "vv-nightly")
362 else(NIGHTLY)
363   set(CPACK_PACKAGE_INSTALL_DIRECTORY "vv")
364 endif(NIGHTLY)
365 set(CPACK_STRIP_FILES TRUE)
366
367 if(WIN32)
368   # There is a bug in NSI that does not handle full unix paths properly. Make
369   # sure there is at least one set of four (4) backlasshes.
370   set(CPACK_NSIS_MUI_ICON "${CMAKE_CURRENT_SOURCE_DIR}\\\\icons\\\\ducky.ico")
371   set(CPACK_NSIS_INSTALLED_ICON_NAME "vv.exe")
372 if(NIGHTLY)
373   set(CPACK_NSIS_DISPLAY_NAME "vv - The 4D slicer (nightly)")
374 else(NIGHTLY)
375   set(CPACK_NSIS_DISPLAY_NAME "vv - The 4D slicer")
376 endif(NIGHTLY)
377   set(CPACK_NSIS_HELP_LINK "http://www.creatis.insa-lyon.fr/rio/vv")
378   set(CPACK_NSIS_URL_INFO_ABOUT "http://www.creatis.insa-lyon.fr/rio")
379   set(CPACK_NSIS_CONTACT "vv@creatis.insa-lyon.fr")
380   set(CPACK_NSIS_CREATE_ICONS_EXTRA "CreateShortCut \\\"$SMPROGRAMS\\\\$STARTMENU_FOLDER\\\\vv.lnk\\\" \\\"$INSTDIR\\\\bin\\\\vv.exe\\\" ")
381   set(CPACK_NSIS_DELETE_ICONS_EXTRA "Delete \\\"$SMPROGRAMS\\\\$MUI_TEMP\\\\vv.lnk\\\" ")
382   #set(CPACK_NSIS_MODIFY_PATH ON) SR: buggy, wait for cmake updates for a fix
383   #set(CPACK_BINARY_ZIP ON)
384 else(WIN32)
385   set(CPACK_GENERATOR "STGZ")
386   set(CPACK_SOURCE_GENERATOR "TGZ")
387 endif(WIN32)
388 include(CPack)
389 #=========================================================
390 #=========================================================
391 configure_file(vvConfiguration.h.in vvConfiguration.h)
392 #=========================================================