1 /*=========================================================================
2 Program: vv http://www.creatis.insa-lyon.fr/rio/vv
5 - University of LYON http://www.universite-lyon.fr/
6 - Léon Bérard cancer center http://www.centreleonberard.fr
7 - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
9 This software is distributed WITHOUT ANY WARRANTY; without even
10 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11 PURPOSE. See the copyright notices for more information.
13 It is distributed under dual licence
15 - BSD See included LICENSE.txt file
16 - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
17 ===========================================================================**/
24 #include <QApplication>
26 #include <QSplashScreen>
28 #include <QDesktopWidget>
32 #include "vvMainWindow.h"
33 #include "vvReadState.h"
34 #include "vvToolsList.h"
35 #include "vvConfiguration.h"
37 #include <vtkFileOutputWindow.h>
38 #include <vtkSmartPointer.h>
40 #include <itkFileOutputWindow.h>
41 #include <itkSmartPointer.h>
42 #include <itksys/SystemTools.hxx>
44 #include <sys/types.h>
48 typedef enum {O_BASE,O_OVERLAY,O_FUSION,O_VF,O_CONTOUR,O_LANDMARKS} OpenModeType;
49 typedef enum {P_NORMAL,P_SEQUENCE,P_WINDOW,P_LEVEL} ParseModeType;
51 void load_image_first_error()
53 std::cerr << "You need to load an image before adding an overlay!" << std::endl;
57 std::string create_timed_string()
62 struct tm* pt = localtime(&t);
66 strftime(st, size, "%Y%m%d-%H%M%S", pt);
71 void open_sequence(vvMainWindow &window,
72 OpenModeType &open_mode,
73 ParseModeType &parse_mode,
74 std::vector<std::string> &sequence_filenames,
77 const std::string open_mode_names[] = {"base", "overlay", "fusion", "vf", "contour", "fusionSequence"};
79 window.LoadImages(sequence_filenames, vvImageReader::MERGEDWITHTIME);
80 else if (open_mode==O_OVERLAY)
81 window.AddOverlayImage(n_image_loaded-1,sequence_filenames,vvImageReader::MERGEDWITHTIME);
82 else if (open_mode==O_LANDMARKS)
83 window.AddLandmarks(n_image_loaded-1,sequence_filenames);
85 std::cerr << "Sequences are not managed for opening " << open_mode_names[open_mode] << std::endl;
90 sequence_filenames.clear();
95 //------------------------------------------------------------------------------
97 int CALLBACK WinMain(HINSTANCE hInstance, HINSTANCE prevInstance, LPSTR lpCmdLine, int nShowCmd)
100 char **argv = __argv;
102 int main( int argc, char** argv )
108 QApplication app( argc, argv );
109 Q_INIT_RESOURCE(vvIcons);
112 // ATTENTION: Rômulo Pinho - 05/08/2011
113 // Forcing the locale of the application is necessary
114 // because QT initialization changes it to the locale
115 // of the language of the system. This can cause
116 // inconsistencies when, e.g., reading float values
117 // from DICOM fields with gdcm, since the decimal
118 // point may be changed for a comma (as in French).
119 // In practice, functions such as scanf and its
120 // variations are directly affected.
121 // https://bugreports.qt.nokia.com//browse/QTBUG-15247?page=com.atlassian.jira.plugin.system.issuetabpanels%253Achangehistory-tabpanel
124 std::string old_locale = setlocale(LC_NUMERIC, NULL);
125 setlocale(LC_NUMERIC, "POSIX");
130 //Try to give the window a sensible default size
131 int width=QApplication::desktop()->width()*0.8;
132 int height=QApplication::desktop()->height()*0.9;
133 if (width> 1.5*height)
135 window.resize(width,height);
139 std::vector<std::string> sequence_filenames;
140 ParseModeType parse_mode = P_NORMAL;
141 OpenModeType open_mode = O_BASE;
142 int n_image_loaded=0;
143 std::string win(""), lev("");
145 int first_of_wl_set = -1;
146 bool new_wl_set = false;
147 bool link_images = false;
149 for (int i = 1; i < argc; i++) {
150 std::string current = argv[i];
151 if (!current.compare(0,1,"-")) { // && !current.compare(0,2,"--")) { //We are parsing an option
152 if (parse_mode == P_SEQUENCE) {//First finish the current sequence
153 open_sequence(window, open_mode, parse_mode, sequence_filenames, n_image_loaded);
155 else if (parse_mode == P_WINDOW) { // handle negative window values
157 window.ApplyWindowToSetOfImages(atof(win.c_str()), first_of_wl_set, n_image_loaded-1);
161 } else if (parse_mode == P_LEVEL) { // handle negative level values
163 window.ApplyLevelToSetOfImages(atof(lev.c_str()), first_of_wl_set, n_image_loaded-1);
168 if ((current=="--help") || (current=="-h")) {
169 std::cout << "vv " << VV_VERSION << ", the 2D, 2D+t, 3D and 3D+t (or 4D) image viewer" << std::endl << std::endl
170 << "Synopsis: vv file(s) [OPTIONS] file(s)" << std::endl << std::endl
171 << "Open file(s) for visualization." << std::endl << std::endl
172 << "OPTIONS may be:" << std::endl
173 << "--help \t Print command line help and exit." << std::endl
174 << "--window number\t Gray scale window width for set of images appearing before in the cmd line (may appear more than once)." << std::endl
175 << "--level number \t Gray scale window level for set of images appearing before in the cmd line (may appear more than once)." << std::endl
176 << "--linkall \t Link pan, zoom and spatial position of crosshair in images." << std::endl
177 << "--log \t Log output messages in vv-log directory." << std::endl
178 << "--state file \t Read display parameters from file." << std::endl
179 << "--sequence file\t Read all file(s) until next option in a single temporal sequence." << std::endl
181 << "These last options must follow a file name since they overlay something on an image:" << std::endl
182 << "--vf file \t Overlay the vector field in file." << std::endl
183 << "--overlay file \t Overlay the image in file with complementary colors." << std::endl
184 << "--fusion file \t Overlay the image in file with alpha blending and colormap." << std::endl
185 //<< "--roi file \t Overlay binary mask images. Option may be repeated on a single base image." << std::endl
186 << "--contour file \t Overlay DICOM RT-STRUCT contours." << std::endl
187 << "--landmarks [--sequence] file(s) \t Overlay the landmarks in file(s) (.txt or .pts)." << std::endl;
189 } else if (current=="--vf") {
190 if (!n_image_loaded) load_image_first_error();
192 } else if (current=="--overlay") {
193 if (!n_image_loaded) load_image_first_error();
194 open_mode = O_OVERLAY;
195 } else if (current=="--contour") {
196 if (!n_image_loaded) load_image_first_error();
197 open_mode = O_CONTOUR;
198 } else if (current=="--fusion") {
199 if (!n_image_loaded) load_image_first_error();
200 open_mode = O_FUSION;
201 } else if (current=="--landmarks") {
202 if (!n_image_loaded) load_image_first_error();
203 open_mode = O_LANDMARKS;
204 } else if (current == "--sequence") {
205 if(open_mode==O_BASE) n_image_loaded++; //count only one for the whole sequence
206 parse_mode=P_SEQUENCE;
209 first_of_wl_set = n_image_loaded-1;
211 } else if (current == "--window") {
213 } else if (current == "--level") {
215 } else if (current == "--linkall") {
218 else if (current == "--log") {
219 std::string log_dir = QDir::tempPath().toStdString() + std::string("/vv-log");
221 if(itksys::SystemTools::FileExists(log_dir.c_str()) &&
222 !itksys::SystemTools::FileIsDirectory(log_dir.c_str())) {
223 std::cerr << "Error creating log directory, file exists and is not a directory." << std::endl;
225 } else if(!itksys::SystemTools::MakeDirectory(log_dir.c_str())) {
226 std::cerr << "Error creating log directory." << std::endl;
230 std::string log_file = log_dir + "/" + create_timed_string() + ".log";
232 itk::SmartPointer<itk::FileOutputWindow> itk_log = itk::FileOutputWindow::New();
233 itk_log->SetFileName(log_file.c_str());
236 itk::OutputWindow::SetInstance(itk_log);
238 vtkSmartPointer<vtkFileOutputWindow> vtk_log = vtkFileOutputWindow::New();
239 vtk_log->SetFileName(log_file.c_str());
242 vtkOutputWindow::SetInstance(vtk_log);
243 } else if (current == "--state") {
244 //window.ReadSavedStateFile(argv[i+1]);
245 vvReadState read_state;
246 read_state.Run(&window, argv[i+1]);
247 n_image_loaded += read_state.GetNumberOfImages();
251 } else if (parse_mode == P_SEQUENCE) {
252 sequence_filenames.push_back(current);
253 } else if (parse_mode == P_WINDOW) {
255 window.ApplyWindowToSetOfImages(atof(win.c_str()), first_of_wl_set, n_image_loaded-1);
258 } else if (parse_mode == P_LEVEL) {
260 window.ApplyLevelToSetOfImages(atof(lev.c_str()), first_of_wl_set, n_image_loaded-1);
264 std::vector<std::string> image;
265 image.push_back(current);
266 if(open_mode==O_BASE) {
267 window.LoadImages(image, vvImageReader::IMAGE);
271 first_of_wl_set = n_image_loaded-1;
274 else if (open_mode==O_VF)
275 window.AddField(current.c_str(), n_image_loaded-1);
276 else if (open_mode==O_OVERLAY)
277 window.AddOverlayImage(n_image_loaded-1,image,vvImageReader::IMAGE);
278 else if (open_mode==O_CONTOUR)
279 window.AddDCStructContour(n_image_loaded-1,current.c_str());
280 else if (open_mode==O_FUSION)
281 window.AddFusionImage(n_image_loaded-1,current.c_str());
282 else if (open_mode==O_LANDMARKS)
283 window.AddLandmarks(n_image_loaded-1,image);
287 if (parse_mode == P_SEQUENCE) { //Finish any current sequence
288 open_sequence(window, open_mode, parse_mode, sequence_filenames, n_image_loaded);
292 // if(win!="" && lev!="") {
293 // window.SetWindowLevel(atof(win.c_str()), atof(lev.c_str()));
294 // window.ApplyWindowLevelToAllImages();
298 window.LinkAllImages();
300 int ret = app.exec();
303 // restoring the locale, just to be clean...
304 setlocale(LC_NUMERIC, old_locale.c_str());