1 /*=========================================================================
2 Program: vv http://www.creatis.insa-lyon.fr/rio/vv
5 - University of LYON http://www.universite-lyon.fr/
6 - Léon Bérard cancer center http://www.centreleonberard.fr
7 - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
9 This software is distributed WITHOUT ANY WARRANTY; without even
10 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11 PURPOSE. See the copyright notices for more information.
13 It is distributed under dual licence
15 - BSD See included LICENSE.txt file
16 - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
17 ===========================================================================**/
20 #include "vvToolCropImage.h"
24 #include "clitkCropImage_ggo.h"
25 #include "clitkCropImageGenericFilter.h"
26 #include "clitkExceptionObject.h"
31 #include <QApplication>
32 #include <QMessageBox>
33 #include <QSignalMapper>
36 #include <vtkVersion.h>
37 #include <vtkStreamingDemandDrivenPipeline.h>
38 #include <vtkInformation.h>
39 #include <vtkImageClip.h>
40 #include <vtkImageTranslateExtent.h>
41 #include <vtkImageData.h>
42 #include <vtkSmartPointer.h>
44 //------------------------------------------------------------------------------
45 // Create the tool and automagically (I like this word) insert it in
46 // the main window menu.
47 ADD_TOOL(vvToolCropImage);
48 //------------------------------------------------------------------------------
50 //same order of int* returned by VtkImageData::WholeExtent
51 enum sliderId {xmin, xmax, ymin, ymax, zmin, zmax, tmin, tmax};
52 //------------------------------------------------------------------------------
53 vvToolCropImage::vvToolCropImage(vvMainWindowBase * parent, Qt::WindowFlags f):
54 vvToolWidgetBase(parent, f),
55 vvToolBase<vvToolCropImage>(parent),
56 Ui::vvToolCropImage(),mSliders(8)
60 Ui_vvToolCropImage::setupUi(mToolWidget);
61 mTLabel1->setHidden(true);
62 mTLabel2->setHidden(true);
63 tminSlider->setHidden(true);
64 tmaxSlider->setHidden(true);
65 spin_tmin->setHidden(true);
66 spin_tmax->setHidden(true);
67 mLabelTimeCropping->setHidden(true);
69 // Set how many inputs are needed for this tool
70 AddInputSelector("Select one image");
72 mSliders[xmin]=xminSlider;
73 mSliders[xmax]=xmaxSlider;
74 mSliders[ymin]=yminSlider;
75 mSliders[ymax]=ymaxSlider;
76 mSliders[zmin]=zminSlider;
77 mSliders[zmax]=zmaxSlider;
78 mSliders[tmin]=tminSlider;
79 mSliders[tmax]=tmaxSlider;
81 // Record initial extend
82 mReducedExtent = new int[6];
83 mInitialExtent = new int[6];
85 //------------------------------------------------------------------------------
88 //------------------------------------------------------------------------------
89 vvToolCropImage::~vvToolCropImage()
91 delete [] mReducedExtent;
92 delete [] mInitialExtent;
94 //------------------------------------------------------------------------------
97 //------------------------------------------------------------------------------
98 void vvToolCropImage::closeEvent(QCloseEvent *event)
100 if(mCurrentSlicerManager){
102 for(int i=0; i<6; i++){
103 mReducedExtent[i] = mInitialExtent[i];
107 vvToolWidgetBase::closeEvent(event);
109 //------------------------------------------------------------------------------
112 //------------------------------------------------------------------------------
113 bool vvToolCropImage::close()
115 return vvToolWidgetBase::close();
117 //------------------------------------------------------------------------------
120 //------------------------------------------------------------------------------
121 void vvToolCropImage::reject()
123 for(int i=0; i<mExtentSize; i++) mReducedExtent[i] = mInitialExtent[i];
125 return vvToolWidgetBase::reject();
127 //------------------------------------------------------------------------------
130 //------------------------------------------------------------------------------
131 void vvToolCropImage::sliderValueChanged(int dim)
134 if(dim%2==0){//case we are minimum
135 mSliders[dim+1]->setMinimum(mSliders[dim]->value());
137 mSliders[--dimMin]->setMaximum(mSliders[dim]->value());
139 mReducedExtent[dim] = mSliders[dim]->value() + mInitialExtent[dimMin];
142 //------------------------------------------------------------------------------
145 //------------------------------------------------------------------------------
146 void vvToolCropImage::UpdateExtent()
148 for(int i=0; i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
149 mCurrentSlicerManager->GetSlicer(i)->SetReducedExtent(mReducedExtent);
150 mCurrentSlicerManager->GetSlicer(i)->ForceUpdateDisplayExtent();
151 mCurrentSlicerManager->GetSlicer(i)->Render();
154 //------------------------------------------------------------------------------
157 //------------------------------------------------------------------------------
158 void vvToolCropImage::InputIsSelected(vvSlicerManager * slicer)
160 // Change interface according to number of dimension
161 mExtentSize = 2*slicer->GetDimension();
162 if (slicer->GetDimension()<4) {
163 mTLabel1->setHidden(true);
164 mTLabel2->setHidden(true);
165 tminSlider->setHidden(true);
166 tmaxSlider->setHidden(true);
167 spin_tmin->setHidden(true);
168 spin_tmax->setHidden(true);
169 mLabelTimeCropping->setHidden(true);
171 if (slicer->GetDimension()<3) {
172 mZLabel1->setHidden(true);
173 mZLabel2->setHidden(true);
174 zminSlider->setHidden(true);
175 zmaxSlider->setHidden(true);
176 spin_zmin->setHidden(true);
177 spin_zmax->setHidden(true);
179 #if VTK_MAJOR_VERSION <= 5
180 int *a = mCurrentImage->GetFirstVTKImageData()->GetWholeExtent();
182 int *a = mCurrentImage->GetFirstVTKImageData()->GetInformation()->Get(vtkDataObject::DATA_EXTENT());
184 for(int i=0; i<6; i++){
185 mInitialExtent[i] = a[i];
186 mReducedExtent[i] = a[i];
188 for(int i=0; i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
189 mCurrentSlicerManager->GetSlicer(i)->EnableReducedExtent(true);
190 mCurrentSlicerManager->GetSlicer(i)->SetReducedExtent(mInitialExtent);
193 // Set initial sliders values
194 int w_ext[6], imsize[3];
195 mCurrentSlicerManager->GetSlicer(0)->GetRegisterExtent(w_ext);
196 for(int dim=0; dim<slicer->GetDimension() && dim<3; ++dim){
197 imsize[dim] = w_ext[2*dim+1] - w_ext[2*dim] +1;
198 mSliders[dim*2]->setMaximum(imsize[dim]-1);
199 mSliders[dim*2+1]->setMaximum(imsize[dim]-1);
200 mSliders[dim*2+1]->setValue(imsize[dim]-1);
202 spin_xmin->setMaximum(imsize[0]-1);
203 spin_xmax->setMaximum(imsize[0]-1);
204 spin_xmax->setValue(imsize[0]-1);
206 spin_ymin->setMaximum(imsize[1]-1);
207 spin_ymax->setMaximum(imsize[1]-1);
208 spin_ymax->setValue(imsize[1]-1);
210 if (slicer->GetDimension() >2) {
211 spin_zmin->setMaximum(imsize[2]-1);
212 spin_zmax->setMaximum(imsize[2]-1);
213 spin_zmax->setValue(imsize[2]-1);
216 if (slicer->GetDimension() >3) {
217 spin_tmin->setMaximum(imsize[3]-1);
218 spin_tmax->setMaximum(imsize[3]-1);
219 spin_tmax->setValue(imsize[3]-1);
222 QSignalMapper* signalMapper = new QSignalMapper(this);
223 connect(signalMapper, SIGNAL(mapped(int)), this, SLOT(sliderValueChanged(int)));
224 for(unsigned int i=0; i<mSliders.size(); ++i){
225 signalMapper->setMapping(mSliders[i], i);
226 connect(mSliders[i], SIGNAL(valueChanged(int)), signalMapper, SLOT(map()));
230 //------------------------------------------------------------------------------
233 //------------------------------------------------------------------------------
234 void vvToolCropImage::autoCropValueChanged(double v)
238 //------------------------------------------------------------------------------
241 //------------------------------------------------------------------------------
242 void vvToolCropImage::apply()
244 if (!mCurrentSlicerManager) close();
245 QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
248 typedef args_info_clitkCropImage ArgsInfoType;
249 typedef clitk::CropImageGenericFilter CropFilterType;
252 ArgsInfoType mArgsInfo;
253 cmdline_parser_clitkCropImage_init(&mArgsInfo); // Initialisation to default
254 int n = mCurrentSlicerManager->GetDimension()*2; // 2D and 3D only
255 mArgsInfo.boundingBox_given = n;
256 mArgsInfo.boundingBox_arg = new int[n];
258 for(int dim=0; dim<mCurrentSlicerManager->GetDimension() && dim<3; ++dim){
259 mArgsInfo.boundingBox_arg[dim*2] = mSliders[dim*2]->value();
260 mArgsInfo.boundingBox_arg[dim*2+1] = mSliders[dim*2+1]->value();
263 mArgsInfo.boundingBox_arg[6] = 0;
264 mArgsInfo.boundingBox_arg[7] = mCurrentImage->GetSize()[3]-1;
266 // We MUST reset initial extend to input image before using the
267 // filter to retrieve the correct image size
268 for(int i=0; i<mExtentSize; i++) {
269 mReducedExtent[i] = mInitialExtent[i];
274 CropFilterType::Pointer filter = CropFilterType::New();
275 filter->SetInputVVImage(mCurrentImage);
276 filter->SetArgsInfo(mArgsInfo);
278 // Go ! (not threaded)
282 catch(clitk::ExceptionObject & e) {
284 QApplication::restoreOverrideCursor();
285 delete [] mArgsInfo.boundingBox_arg;
288 std::ostringstream croppedImageName;
289 croppedImageName << "Cropped_" << mCurrentSlicerManager->GetSlicer(0)->GetFileName() << ".mhd";
290 // Retrieve result and display it
291 vvImage::Pointer output = filter->GetOutputVVImage();
293 AddImage(output,croppedImageName.str());
296 QApplication::restoreOverrideCursor();
297 delete [] mArgsInfo.boundingBox_arg;
300 //------------------------------------------------------------------------------