#----------------------------------------------------------------------------- # DICOM dictionary stuff INSTALL_FILES(${GDCM_DATA_DIR} FILES dicomV3.dic dicomVR.dic dicomTS.dic DicomDir.dic ) # Nice trick to avoid creating a .h file each time we compile gdcm # Since CONFIGURE_FILE do a 'copy if different' # We have to write the file here since is contains 'DICOM_DICTIONARY' # Which is a variable afterward... # Following code contributing by Andy Cedilnik (Kitware) FILE(READ "dicomV3.dic" ENT) STRING(REGEX REPLACE "\n" ";" ENT "${ENT}") SET(DICOM_DATA_DICTIONARY "") FOREACH(line ${ENT}) STRING(REGEX REPLACE "^([0-9a-f][0-9a-f][0-9a-f][0-9a-f]) ([0-9a-f][0-9a-f][0-9a-f][0-9a-f]) ([A-Z]+) ([A-Z?]+) (.*)$" " 0x\\1, 0x\\2, \"\\3\" , \"\\4\" , \"\\5\", " nline "${line}") SET(DICOM_DATA_DICTIONARY "${DICOM_DATA_DICTIONARY}\n${nline}") ENDFOREACH(line) SET(DICOM_DATA_DICTIONARY "${DICOM_DATA_DICTIONARY} \n 0,0,0,0,0") FILE(READ "dicomTS.dic" ENT_TS) STRING(REGEX REPLACE "\n" ";" ENT_TS "${ENT_TS}") SET(DICOM_TS_DICTIONARY "") FOREACH(line ${ENT_TS}) STRING(REGEX REPLACE "^([0-9.]+) +(.*)$" " ts[\"\\1\"] = \"\\2\"; " nline "${line}") SET(DICOM_TS_DICTIONARY "${DICOM_TS_DICTIONARY}\n${nline}") ENDFOREACH(line) FILE(READ "dicomVR.dic" ENT_VR) STRING(REGEX REPLACE ";" "/" ENT_VR "${ENT_VR}") # CMake doesn't like ';' STRING(REGEX REPLACE "\n" ";" ENT_VR "${ENT_VR}") SET(DICOM_VR_DICTIONARY "") FOREACH(line ${ENT_VR}) STRING(REGEX REPLACE "^([A-Z][A-Z]) (.*)/ +//.*$" " vr[\"\\1\"] = \"\\2\"; " nline "${line}") SET(DICOM_VR_DICTIONARY "${DICOM_VR_DICTIONARY}\n${nline}") ENDFOREACH(line) FILE(READ "DicomDir.dic" ENT_DIR) STRING(REGEX REPLACE "\\\\" "\\\\\\\\" ENT_DIR "${ENT_DIR}") STRING(REGEX REPLACE ";" "/" ENT_DIR "${ENT_DIR}") # CMake doesn't like ';' STRING(REGEX REPLACE "\n" ";" ENT_DIR "${ENT_DIR}") SET(DICOM_DIR_DICTIONARY "") FOREACH(line ${ENT_DIR}) STRING(REGEX REPLACE "^(metaElem|patientElem|studyElem|serieElem|imageElem) *([a-f0-9]+) ([a-f0-9]+) [\"](.*)[\"](.*)$" " \"\\1\" , 0x\\2 , 0x\\3 , \"\\4\", \\5" nline "${line}") SET(DICOM_DIR_DICTIONARY "${DICOM_DIR_DICTIONARY}\n${nline}") ENDFOREACH(line) SET(DICOM_DIR_DICTIONARY "${DICOM_DIR_DICTIONARY} \n 0,0,0,0") # See above CONFIGURE_FILE("${GDCM_SOURCE_DIR}/src/gdcmDefaultDicts.cxx.in" "${GDCM_BINARY_DIR}/src/gdcmDefaultDicts.cxx" IMMEDIATE) FILE(READ "dicomV3VM2004.dic" ENT2) STRING(REGEX REPLACE "\n" ";" ENT2 "${ENT2}") SET(DICOM_DICTIONARY2 "") FOREACH(line ${ENT2}) STRING(REGEX REPLACE # "^([0-9a-f][0-9a-f][0-9a-f][0-9a-f]) ([0-9a-f][0-9a-f][0-9a-f][0-9a-f]) ([A-Z]+) ([A-Z]+) (.*)([ \(RET\)]*)$" "^([0-9a-f][0-9a-f][0-9a-f][0-9a-f]) ([0-9a-f][0-9a-f][0-9a-f][0-9a-f]) ([A-Z]+) ([0-9]|[1]-[0-9n]|[2]-[2][n]|[3]-[3][n]) (.*)$" # " { \\1, \\2, \"\\3\" , \"\\4\" , \"\\5\", \"\\6\"}," nline "${line}") " { \\1, \\2, \"\\3\" , \"\\4\" , \"\\5\"}," nline "${line}") SET(DICOM_DICTIONARY2 "${DICOM_DICTIONARY2}\n${nline}") ENDFOREACH(line) #FILE(READ "04_06PU.txt" ENT3) FILE(READ "extract.txt" ENT3) STRING(REGEX REPLACE "\n" ";" ENT3 "${ENT3}") SET(DICOM_DICTIONARY3 "") FOREACH(line ${ENT3}) STRING(REGEX REPLACE # "^[(]([0-9a-fA-F]+),([0-9a-fA-F]+)[)] (.*) ([A-ZA-Z]*) ([[0-3][-][1-3n]*|[1-]*[0-9]+]*) ?([RET|Retired]*)$" "^[(]([0-9a-fA-F]+),([0-9a-fA-F]+)[)] +(.*) +([A-ZA-Z [[0-3][-][1-3n]*|[1-]*[0-9]+]]*)([ RET]*)$" " { \\1 , \\2, \\3, \\4, \\5 }," nline "${line}") STRING(COMPARE NOTEQUAL "${line}" "${nline}" add) IF(add) #SET(DICOM_DICTIONARY3 "${DICOM_DICTIONARY3}\n${nline}") MESSAGE("${nline}") ELSE(add) MESSAGE("WRONG:${nline}") ENDIF(add) ENDFOREACH(line) # Txt generation: # ~/Software/xpdf-3.00-linux/pdftotext -f 9 -l 81 -raw -nopgbrk 04_06PU.PDF 04_06PU-3.txt