#include "gdcmHeader.h" #include "gdcmFile.h" #include "gdcmDocument.h" #include "gdcmValEntry.h" #ifndef _WIN32 #include #endif // return true if the file exists bool FileExists(const char* filename) { #ifdef _MSC_VER # define access _access #endif #ifndef R_OK # define R_OK 04 #endif if ( access(filename, R_OK) != 0 ) { return false; } else { return true; } } bool RemoveFile(const char* source) { #ifdef _MSC_VER #define _unlink unlink #endif return unlink(source) != 0 ? false : true; } // Here we load a gdcmFile and then try to create from scratch a copy of it, // copying field by field the dicom image int main(int argc, char* argv[]) { if (argc < 3) { std::cerr << "Usage :" << std::endl << argv[0] << " input_dicom output_dicom" << std::endl; return 1; } if( FileExists( argv[2] ) ) { std::cerr << "Don't try to cheat, I am removing the file anyway" << std::endl; if( !RemoveFile( argv[2] ) ) { std::cerr << "Ouch, the file exist, but I cannot remove it" << std::endl; return 1; } } gdcmFile *original = new gdcmFile( argv[1] ); std::cout << "--- Original ----------------------" << std::endl; //original->GetHeader()->Print(); gdcmFile *copy = new gdcmFile( argv[2] ); //First of all copy the header field by field // Warning :Accessor gdcmElementSet::GetEntry() should not exist //It was commented out by Mathieu, that was a *good* idea // (the user does NOT have to know the way we implemented the Header !) TagDocEntryHT & Ht = original->GetHeader()->GetEntry(); for (TagDocEntryHT::iterator tag = Ht.begin(); tag != Ht.end(); ++tag) { if (tag->second->GetVR() == "SQ") //to skip pb of SQ recursive exploration continue; //According to JPR I should also skip those: if (tag->second->GetVR() == "unkn") //to skip pb of SQ recursive exploration continue; std::string value = ((gdcmValEntry*)(tag->second))->GetValue(); if( value.find( "gdcm::NotLoaded" ) != 0 ) continue; // the following produce a seg fault at write time: // if( value.find( "gdcm::Loaded" ) != 0 ) // continue; //std::cerr << "Reading: " << tag->second->GetVR() << std::endl; //tag->second->Print(); std::cout << std::endl; //std::cerr << "Reading: " << value << std::endl; // Well ... Should have dynamic cast here copy->GetHeader()->ReplaceOrCreateByNumber( value, tag->second->GetGroup(), tag->second->GetElement() ); // todo : Setting Offset to 0 to avoid further missprint } size_t dataSize = original->GetImageDataSize(); void *imageData = original->GetImageData(); copy->GetImageData(); copy->SetImageData(imageData, dataSize); std::cout << "--- Copy ----------------------" << std::endl; std::cout <GetHeader()->Print(); std::cout << "--- ---- ----------------------" << std::endl; copy->WriteDcmExplVR( argv[2] ); return 0; }