#include "bbSlicerForegroundmaskingBRAINS.h" #include "bbSlicerPackage.h" namespace bbSlicer { BBTK_ADD_BLACK_BOX_TO_PACKAGE ( Slicer, ForegroundmaskingBRAINS ) BBTK_BLACK_BOX_IMPLEMENTATION ( ForegroundmaskingBRAINS, bbtk::AtomicBlackBox ); void ForegroundmaskingBRAINS::Process ( ) { // GENERATED int _argc =9; std::string lib = "/home/riveros/.slicer/Slicer4-bin/Slicer-build/lib/Slicer-4.0/cli-modules/libBRAINSROIAutoLib.so"; char * _argv[ ] = { Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--inputVolume" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputinputVolume( ) ) ) ,"@@@@@"," --inputVolume ") ), Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--outputROIMaskVolume" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputoutputROIMaskVolume( ) ) ) ,"@@@@@"," --outputROIMaskVolume ") ), Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--outputClippedVolumeROI" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputoutputClippedVolumeROI( ) ) ) ,"@@@@@"," --outputClippedVolumeROI ") ), Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--otsuPercentileThreshold" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputotsuPercentileThreshold( ) ) ) ,"@@@@@"," --otsuPercentileThreshold ") ), Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--thresholdCorrectionFactor" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputthresholdCorrectionFactor( ) ) ) ,"@@@@@"," --thresholdCorrectionFactor ") ), Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--closingSize" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputclosingSize( ) ) ) ,"@@@@@"," --closingSize ") ), Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--ROIAutoDilateSize" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputROIAutoDilateSize( ) ) ) ,"@@@@@"," --ROIAutoDilateSize ") ), Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--outputVolumePixelType" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputoutputVolumePixelType( ) ) ) ,"@@@@@"," --outputVolumePixelType ") ), Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--numberOfThreads" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputnumberOfThreads( ) ) ) ,"@@@@@"," --numberOfThreads ") ) }; // EO GENERATED this->execute( lib, _argc, _argv ); } void ForegroundmaskingBRAINS::execute ( std::string lib, int _argc, char * _argv[] ) { void* handle = dlopen( lib.c_str( ), RTLD_NOW | RTLD_GLOBAL ); if ( ! handle ) { std::cerr << "CAN'T OPEN LIBRARY: " << dlerror( ) << '\n'; return; } typedef int (*method_t )( int argc, char * argv[] ); // RESET ERROR dlerror( ); // PROTOTYPE method_t myMethod = ( method_t ) dlsym( handle, "ModuleEntryPoint" ); const char *dlsym_error = dlerror( ); if ( dlsym_error ) { std::cerr << "CAN'T LOAD SYMBOL 'ModuleEntryPoint':" << dlsym_error << '\n'; dlclose( handle ); return; } // METHOD CALL myMethod( _argc, _argv ); // CLOSING LIB dlclose( handle ); } void ForegroundmaskingBRAINS::bbUserSetDefaultValues ( ) { } void ForegroundmaskingBRAINS::bbUserInitializeProcessing ( ) { } void ForegroundmaskingBRAINS::bbUserFinalizeProcessing ( ) { } } // EO namespace bbSlicer