/*========================================================================= Program: gdcm Module: $RCSfile: TestReadWriteReadCompare.cxx,v $ Language: C++ Date: $Date: 2005/01/21 11:40:54 $ Version: $Revision: 1.20 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information. =========================================================================*/ #include "gdcmFile.h" #include "gdcmFileHelper.h" //Generated file: #include "gdcmDataImages.h" int CompareInternal(std::string const & filename, std::string const & output) { std::cout << " Testing: " << filename << std::endl; //////////////// Step 1 (see above description): gdcm::File *header = new gdcm::File( filename ); if( !header->IsReadable() ) { std::cerr << "Test::TestReadWriteReadCompare: Image not gdcm compatible:" << filename << std::endl; delete header; return 1; } std::cout << " step 1..."; //////////////// Step 2: gdcm::FileHelper* file = new gdcm::FileHelper( header ); int dataSize = file->GetImageDataSize(); uint8_t* imageData = file->GetImageData(); //EXTREMELY IMPORTANT // Sure, it is : It's up to the user to decide if he wants to // GetImageData or if he wants to GetImageDataRaw // (even if we do it by setting a flag, he will have to decide) /// \todo Following line commented out because gdcmFile::SetImageData() is /// brain dead: it sets ImageDataSize to its argument and PixelRead to a. /// Later on, when writing gdcmFile::WriteBase() /// and because PixelRead == 1 we call /// PixelElement->SetLength( ImageDataSizeRaw ); /// where we use ImageDataSizeRAW instead of ImageDataSize ! /// But when the original image made the transformation LUT -> RGB, /// ImageDataSizeRaw is the third of ImageDataSize, and there is no /// reason (since we called gdcmFile::SetImageData) to use the Raw image /// size... This "bug" in gdcmFile made that we had to black list /// images 8BitsUncompressedColor.dcm, OT-PAL-8-face.dcm and /// US-PAL-8-10x-echo.dcm... /// In conclusion fix gdcmFile, and then uncomment the following line. // --> I did. ctest doesn't break. But ... is it enought to say it's OK ? file->SetImageData(imageData, dataSize); file->SetWriteModeToRGB(); file->WriteDcmExplVR( output ); std::cout << "2..."; //////////////// Step 3: gdcm::FileHelper* reread = new gdcm::FileHelper( output ); if( !reread->GetFile()->IsReadable() ) { std::cerr << "Failed" << std::endl << "Test::TestReadWriteReadCompare: Could not reread image " << "written:" << filename << std::endl; delete header; delete file; delete reread; return 1; } std::cout << "3..."; // For the next step: int dataSizeWritten = reread->GetImageDataSize(); uint8_t* imageDataWritten = reread->GetImageData(); //////////////// Step 4: // Test the image size if (header->GetXSize() != reread->GetFile()->GetXSize() || header->GetYSize() != reread->GetFile()->GetYSize() || header->GetZSize() != reread->GetFile()->GetZSize()) { std::cout << "Failed" << std::endl << " X Size differs: " << "X: " << header->GetXSize() << " # " << reread->GetFile()->GetXSize() << " | " << "Y: " << header->GetYSize() << " # " << reread->GetFile()->GetYSize() << " | " << "Z: " << header->GetZSize() << " # " << reread->GetFile()->GetZSize() << std::endl; delete header; delete file; delete reread; return 1; } // Test the data size if (dataSize != dataSizeWritten) { std::cout << "Failed" << std::endl << " Pixel areas lengths differ: " << dataSize << " # " << dataSizeWritten << std::endl; delete header; delete file; delete reread; return 1; } // Test the data's content if (int res = memcmp(imageData, imageDataWritten, dataSize) !=0) { (void)res; std::cout << "Failed" << std::endl << " Pixel differ (as expanded in memory)." << std::endl; delete header; delete file; delete reread; return 1; } std::cout << "4...OK." << std::endl ; //////////////// Clean up: delete header; delete file; delete reread; return 0; } int TestReadWriteReadCompare(int argc, char* argv[]) { int result = 0; if (argc == 3) { const std::string input = argv[1]; const std::string output = argv[2]; result += CompareInternal(input, output); } else if( argc > 3 || argc == 2 ) { std::cerr << "Please read the manual" << std::endl; } else { std::cout<< "Test::TestReadWriteReadCompare: description " << std::endl; std::cout << " For all images in gdcmData (and not blacklisted in " "Test/CMakeLists.txt)" << std::endl; std::cout << " apply the following multistep test: " << std::endl; std::cout << " step 1: parse the image (as gdcmFile) and call" << " IsReadable(). " << std::endl; std::cout << " step 2: write the corresponding image in DICOM V3 " << "with explicit" << std::endl << " Value Representation in temporary file " << "TestReadWriteReadCompare.dcm." << std::endl; std::cout << " step 3: read the image written on step2 and call " << " IsReadable(). " << std::endl; std::cout << " step 4: compare (in memory with memcmp) that the two " << "images " << std::endl << " match (as expanded by gdcm)." << std::endl; int i = 0; while( gdcmDataImages[i] != 0 ) { std::string filename = GDCM_DATA_ROOT; filename += "/"; filename += gdcmDataImages[i++]; result += CompareInternal(filename, "TestReadWriteReadCompare.dcm"); } } return result; }