#ifndef __bbSlicerResampleImageBRAINS_h_INCLUDED__
#define __bbSlicerResampleImageBRAINS_h_INCLUDED__

#include "bbSlicer_EXPORT.h"
#include "bbtkAtomicBlackBox.h"

#include <vector>
#include <cstdlib>
#include <dlfcn.h>
#include <sstream>
#include <fstream>
#include <iostream>

#include <ModuleDescriptionUtilities.h>
#include <ModuleDescriptionParser.h>
#include <ModuleParameterGroup.h>
#include <ModuleDescription.h>
#include <ModuleParameter.h>

#include "CreationTool.h"

namespace bbSlicer {

    class bbSlicer_EXPORT ResampleImageBRAINS
    :
    public bbtk::AtomicBlackBox {
        BBTK_BLACK_BOX_INTERFACE ( ResampleImageBRAINS , bbtk::AtomicBlackBox ) ;

        // GENERATED ARGS        
        
BBTK_DECLARE_INPUT ( inputVolume , std::string );
BBTK_DECLARE_INPUT ( referenceVolume , std::string );
BBTK_DECLARE_INPUT ( outputVolume , std::string );
BBTK_DECLARE_INPUT ( pixelType , std::string );
BBTK_DECLARE_INPUT ( deformationVolume , std::string );
BBTK_DECLARE_INPUT ( warpTransform , std::string );
BBTK_DECLARE_INPUT ( interpolationMode , std::string );
BBTK_DECLARE_INPUT ( inverseTransform , bool );
BBTK_DECLARE_INPUT ( defaultValue , float );
BBTK_DECLARE_INPUT ( gridSpacing , std::vector<int> );
BBTK_DECLARE_INPUT ( numberOfThreads , int );

        // EO GENERATED ARGS

        BBTK_PROCESS ( Process ) ;
        void Process ( ) ;
    private:
        void execute ( std::string lib , int _argc , char * _argv[] ) ;
    } ;

    BBTK_BEGIN_DESCRIBE_BLACK_BOX ( ResampleImageBRAINS , bbtk::AtomicBlackBox ) ;
    BBTK_NAME ( "ResampleImageBRAINS" ) ;
    BBTK_AUTHOR ( "This tool was developed by Vincent Magnotta, Greg Harris, and Hans Johnson." ) ;
    BBTK_DESCRIPTION ( "This program resamples an image image using a deformation field or a transform BSpline, Affine, Rigid, etc.." ) ;
    BBTK_CATEGORY ( "Registration" ) ;

    // GENERATED DESCRPTION
    
BBTK_INPUT(ResampleImageBRAINS , inputVolume , "inputVolume" , std::string, "");
BBTK_INPUT(ResampleImageBRAINS , referenceVolume , "referenceVolume" , std::string, "");
BBTK_INPUT(ResampleImageBRAINS , outputVolume , "outputVolume" , std::string, "");
BBTK_INPUT(ResampleImageBRAINS , pixelType , "pixelType" , std::string, "");
BBTK_INPUT(ResampleImageBRAINS , deformationVolume , "deformationVolume" , std::string, "");
BBTK_INPUT(ResampleImageBRAINS , warpTransform , "warpTransform" , std::string, "");
BBTK_INPUT(ResampleImageBRAINS , interpolationMode , "interpolationMode" , std::string, "");
BBTK_INPUT(ResampleImageBRAINS , inverseTransform , "inverseTransform" , bool, "");
BBTK_INPUT(ResampleImageBRAINS , defaultValue , "defaultValue" , float, "");
BBTK_INPUT(ResampleImageBRAINS , gridSpacing , "gridSpacing" , std::vector<int>, "");
BBTK_INPUT(ResampleImageBRAINS , numberOfThreads , "numberOfThreads" , int, "");

    // EO GENERATED DESCRIPTION

    BBTK_END_DESCRIBE_BLACK_BOX ( ResampleImageBRAINS ) ;
}

#endif // __bbSlicerResampleImageBRAINS_h_INCLUDED__