#include "clitkImageToImageGenericFilter.h" #include "clitkImageCommon.h" //-------------------------------------------------------------------- clitk::ImageToImageGenericFilterBase::ImageToImageGenericFilterBase(std::string n) :mIOVerbose(false) { mFilterName = n; mListOfAllowedDimension.clear(); mListOfAllowedPixelType.clear(); mFailOnImageTypeError = true; } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::AddImageType(unsigned int d, std::string p) { // Search for dimension (to not duplicate) std::vector::const_iterator it = std::find (mListOfAllowedDimension.begin(), mListOfAllowedDimension.end(), d); if (it == mListOfAllowedDimension.end()) mListOfAllowedDimension.push_back(d); // Search for PixelType (to not duplicate) std::vector::const_iterator itt = std::find (mListOfAllowedPixelType.begin(), mListOfAllowedPixelType.end(), p); if (itt == mListOfAllowedPixelType.end()) mListOfAllowedPixelType.push_back(p); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetInputFilenames(const std::vector & filenames) { mInputFilenames.resize(filenames.size()); std::copy(filenames.begin(), filenames.end(), mInputFilenames.begin()); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetInputFilename(const std::string & filename) { std::vector f; f.push_back(filename); SetInputFilenames(f); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::AddInputFilename(const std::string & filename) { mInputFilenames.push_back(filename); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetOutputFilename(const std::string & filename) { mOutputFilenames.clear(); mOutputFilenames.push_back(filename); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::AddOutputFilename(const std::string & filename) { mOutputFilenames.push_back(filename); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetOutputFilenames(const std::vector & filenames) { std::copy(filenames.begin(), filenames.end(), mOutputFilenames.begin()); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- std::string clitk::ImageToImageGenericFilterBase::GetOutputFilename() { assert(mOutputFilenames.size() == 1); return mOutputFilenames.front(); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::GetInputImageDimensionAndPixelType(unsigned int& dim, \ std::string& pixeltype,unsigned int& components) { if (mInputFilenames.size()) { int comp_temp,dim_temp; //clitkCommonImage takes ints ReadImageDimensionAndPixelType(mInputFilenames[0], dim_temp, pixeltype,comp_temp); components=comp_temp; dim=dim_temp; } else if (mInputVVImages.size()) { pixeltype=mInputVVImages[0]->GetScalarTypeAsString(); dim=mInputVVImages[0]->GetNumberOfDimensions(); components=mInputVVImages[0]->GetNumberOfScalarComponents(); } else assert(false); //No input image, shouldn't happen if (mIOVerbose) { std::cout << "Input is " << mDim << "D " << mPixelTypeName << "." << std::endl; } } //-------------------------------------------------------------------- //-------------------------------------------------------------------- vvImage::Pointer clitk::ImageToImageGenericFilterBase::GetOutputVVImage () { assert(mOutputVVImages.size()); return mOutputVVImages[0]; } //-------------------------------------------------------------------- //-------------------------------------------------------------------- std::vector clitk::ImageToImageGenericFilterBase::GetOutputVVImages() { return mOutputVVImages; } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetInputVVImage (vvImage::Pointer input) { mInputVVImages.clear(); mInputVVImages.push_back(input); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::AddInputVVImage (vvImage::Pointer input) { mInputVVImages.push_back(input); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- void clitk::ImageToImageGenericFilterBase::SetInputVVImages (std::vector input) { mInputVVImages=input; } //-------------------------------------------------------------------- //-------------------------------------------------------------------- bool clitk::ImageToImageGenericFilterBase::CheckImageType() { return (CheckDimension() && CheckPixelType()); } //-------------------------------------------------------------------- //-------------------------------------------------------------------- bool clitk::ImageToImageGenericFilterBase::CheckDimension(unsigned int d) { bool b = false; unsigned int i=0; while ((!b) && (i manages "; for(unsigned int i=0; i is not available for " << mDim << "D images with pixel=" << mPixelTypeName << "." << std::endl; std::cerr << "**Error** Allowed image dim: \t"; for(unsigned int i=0; i