%module gdcm %{ #include "gdcmCommon.h" #include "gdcmDict.h" #include "gdcmDictEntry.h" #include "gdcmDictSet.h" #include "gdcmDicomDir.h" #include "gdcmDicomDirElement.h" #include "gdcmDicomDirImage.h" #include "gdcmDicomDirMeta.h" #include "gdcmDicomDirObject.h" #include "gdcmDicomDirPatient.h" #include "gdcmDicomDirStudy.h" #include "gdcmDicomDirSerie.h" #include "gdcmDocEntrySet.h" #include "gdcmDocument.h" #include "gdcmElementSet.h" #include "gdcmFile.h" #include "gdcmGlobal.h" #include "gdcmHeader.h" #include "gdcmHeaderHelper.h" #include "gdcmRLEFramesInfo.h" #include "gdcmJPEGFragmentsInfo.h" #include "gdcmSQItem.h" #include "gdcmUtil.h" #include "gdcmValEntry.h" //////////////////////////////////////////////////////////////////////////// // Utility functions on strings for removing leading and trailing spaces void EatLeadingAndTrailingSpaces(std::string & s) { while ( s.length() && (s[0] == ' ') ) s.erase(0,1); while ( s.length() && (s[s.length()-1] == ' ') ) s.erase(s.length()-1, 1); } void gdcmPythonVoidFunc(void *arg) { PyObject *arglist, *result; PyObject *func = (PyObject *)arg; arglist = Py_BuildValue("()"); result = PyEval_CallObject(func, arglist); Py_DECREF(arglist); if (result) { Py_XDECREF(result); } else { if (PyErr_ExceptionMatches(PyExc_KeyboardInterrupt)) { std::cerr << "Caught a Ctrl-C within python, exiting program.\n"; Py_Exit(1); } PyErr_Print(); } } void gdcmPythonVoidFuncArgDelete(void *arg) { PyObject *func = (PyObject *)arg; if (func) { Py_DECREF(func); } } using namespace gdcm; %} typedef unsigned short guint16; typedef unsigned int guint32; //////////////////////////////////////////////////////////////////////////// %typemap(out) std::list * { PyObject* NewItem = (PyObject*)0; PyObject* NewList = PyList_New(0); // The result of this typemap for (std::list::iterator NewString = ($1)->begin(); NewString != ($1)->end(); ++NewString) { NewItem = PyString_FromString(NewString->c_str()); PyList_Append( NewList, NewItem); } $result = NewList; } //////////////////////////////////////////////////////////////////////////// // Convert a c++ hash table in a python native dictionary %typemap(out) std::map > * { PyObject* NewDict = PyDict_New(); // The result of this typemap PyObject* NewKey = (PyObject*)0; PyObject* NewVal = (PyObject*)0; for (std::map >::iterator tag = ($1)->begin(); tag != ($1)->end(); ++tag) { std::string first = tag->first; // Do not publish entries whose keys is made of spaces if (first.length() == 0) continue; NewKey = PyString_FromString(first.c_str()); PyObject* NewList = PyList_New(0); for (std::list::iterator Item = tag->second.begin(); Item != tag->second.end(); ++Item) { NewVal = PyString_FromString(Item->c_str()); PyList_Append( NewList, NewVal); } PyDict_SetItem( NewDict, NewKey, NewList); } $result = NewDict; } //////////////////////////////////////////////////////////////////////////// // Convert a c++ hash table in a python native dictionary %typemap(out) gdcm::TagDocEntryHT & { PyObject* NewDict = PyDict_New(); // The result of this typemap std::string RawName; // Element name as gotten from gdcm PyObject* NewKey = (PyObject*)0; // Associated name as python object std::string RawValue; // Element value as gotten from gdcm PyObject* NewVal = (PyObject*)0; // Associated value as python object for (gdcm::TagDocEntryHT::iterator tag = $1->begin(); tag != $1->end(); ++tag) { // The element name shall be the key: RawName = tag->second->GetName(); // gdcm unrecognized (including not loaded because their size exceeds // the user specified treshold) elements are exported with their // TagKey as key. if (RawName == "Unknown") RawName = tag->second->GetKey(); NewKey = PyString_FromString(RawName.c_str()); // Element values are striped from leading/trailing spaces if (gdcm::ValEntry* ValEntryPtr = dynamic_cast< gdcm::ValEntry* >(tag->second) ) { RawValue = ValEntryPtr->GetValue(); } else continue; EatLeadingAndTrailingSpaces(RawValue); NewVal = PyString_FromString(RawValue.c_str()); PyDict_SetItem( NewDict, NewKey, NewVal); } $result = NewDict; } //////////////////////////////////////////////////////////////////////////// %typemap(out) ListDicomDirPatient & { PyObject* NewItem = (PyObject*)0; $result = PyList_New(0); // The result of this typemap for (std::list::iterator New = ($1)->begin(); New != ($1)->end(); ++New) { NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirPatient,1); PyList_Append($result, NewItem); } } %typemap(out) ListDicomDirStudy & { PyObject* NewItem = (PyObject*)0; $result = PyList_New(0); // The result of this typemap for (std::list::iterator New = ($1)->begin(); New != ($1)->end(); ++New) { NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirStudy,1); PyList_Append($result, NewItem); } } %typemap(out) ListDicomDirSerie & { PyObject* NewItem = (PyObject*)0; $result = PyList_New(0); // The result of this typemap for (std::list::iterator New = ($1)->begin(); New != ($1)->end(); ++New) { NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirSerie,1); PyList_Append($result, NewItem); } } %typemap(out) ListDicomDirImage & { PyObject* NewItem = (PyObject*)0; $result = PyList_New(0); // The result of this typemap for (std::list::iterator New = ($1)->begin(); New != ($1)->end(); ++New) { NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirImage,1); PyList_Append($result, NewItem); } } //////////////////////////////////////////////////////////////////////////// // Deals with function returning a C++ string. %typemap(python, in) (gdcm::Method *,void * =NULL,gdcm::Method * =NULL) { if($input!=Py_None) { Py_INCREF($input); $1=gdcmPythonVoidFunc; $2=$input; $3=gdcmPythonVoidFuncArgDelete; } else { $1=NULL; $2=NULL; $3=NULL; } } //////////////////////////////////////////////////////////////////////////// // Deals with function returning a C++ string. %typemap(out) string, std::string { $result = PyString_FromString(($1).c_str()); } %typemap(python, in) const std::string, std::string { $1 = PyString_AsString($input); } //////////////////////////////////////////////////////////////////////////// // Warning: Order matters ! %include "gdcmCommon.h" %include "gdcmRLEFramesInfo.h" %include "gdcmJPEGFragmentsInfo.h" %include "gdcmDictEntry.h" %include "gdcmDict.h" %include "gdcmDocEntry.h" %include "gdcmDocEntrySet.h" %include "gdcmElementSet.h" %include "gdcmDictSet.h" %include "gdcmTS.h" %include "gdcmVR.h" %include "gdcmSQItem.h" %include "gdcmDicomDirElement.h" %include "gdcmDicomDirObject.h" %include "gdcmDicomDirImage.h" %include "gdcmDicomDirSerie.h" %include "gdcmDicomDirStudy.h" %include "gdcmDicomDirPatient.h" %include "gdcmDicomDirMeta.h" %include "gdcmDocument.h" %include "gdcmHeader.h" %include "gdcmHeaderHelper.h" %include "gdcmFile.h" %include "gdcmUtil.h" %include "gdcmGlobal.h" %include "gdcmDicomDir.h"