//---------------------------------------------------------------------------------------------------------------- // Class definition include //---------------------------------------------------------------------------------------------------------------- #include "KernelManagerContour.h" KernelManagerContour::KernelManagerContour(){ /**THIS ALL SHOULD BE IN AN OTHER LIB CALLED PERSISTANCE ** **/ inredo = 0; inundo = 0; stundoredo = "data/temp"; _currentIndex = 0; _contourPropagation = NULL; #if(WIN32) mkdir(stundoredo.c_str()); #else mkdir(stundoredo.c_str(),755); #endif stundoredo += "/cont"; /** ** FINISH PERSISTANCE **/ } KernelManagerContour::KernelManagerContour(std::vector images){ /**THIS ALL SHOULD BE IN AN OTHER LIB CALLED PERSISTANCE ** **/ inredo = 0; inundo = 0; stundoredo = "data/temp"; _currentIndex = 0; _contourPropagation = NULL; #if(WIN32) mkdir(stundoredo.c_str()); #else mkdir(stundoredo.c_str(),755); #endif stundoredo += "/cont"; /** ** FINISH PERSISTANCE **/ setVectImages(images); initializeEnvironment(); } KernelManagerContour::~KernelManagerContour(){ } std::vector KernelManagerContour::getVectImages(){ return vectimages; } void KernelManagerContour::setVectImages(std::vector vectimg){ vectimages = vectimg; } void KernelManagerContour::initializeEnvironment(){ std::string conceptsFN = "data/holaConceptsFile.cf"; std::string imageSourcesFN = "data/holaImagesInstantsFile.of"; std::string imageSectionsFN = ""; std::string axeThingsFN = ""; std::map * sourcesMap = new std::map(); std::map* sectionsMap = new std::map(); std::map* axesMap = new std::map(); std::map* outlinesMap = new std::map(); for(int i = 0; i < vectimages.size(); i++){ vtkImageData* selectedimage = vectimages[i]; ImageSourceThing * thing = new ImageSourceThing(selectedimage); std::string imgstring = "Source Image "+intToString(i+1); sourcesMap->insert(std::pair( imgstring, thing)); } OutlineModelBuilder * _builder = new OutlineModelBuilder( conceptsFN ); _builder->buildImageSource_Envornment( imageSourcesFN, sourcesMap ); _builder->buildImageSection_Envornment( imageSectionsFN, sectionsMap ); _builder->buildAxe_Envornment(axeThingsFN, axesMap ); _builder->buildCountour_Envornment( imageSectionsFN, outlinesMap ); //Creating the objects to manage modelManager = new OutlineModelManager( _builder->getImSourceEnv(), _builder->getImSectionEnv(), _builder->getAxesEnv(), _builder->getContourEnv() ); imageSource = modelManager->getImageSourceThingByKeyName( "Source Image 1" ); } vtkImageData* KernelManagerContour::getSourceImage(){ return imageSource->getSourceImage(); } OutlineModelManager* KernelManagerContour::getOutlineModelManager(){ return modelManager; } std::string KernelManagerContour::createOutline(manualContourModel * manModelContour,std::vector instantVector){ return modelManager->createOutline( manModelContour, instantVector ); } std::string KernelManagerContour::intToString(int num){ std::string result; if(num == 0){ result = "0"; }else{ int k=num; while (k > 0){ char temp = k % 10 + 48; k = k / 10; result = temp + result; } } return result; } std::vector KernelManagerContour::GetLstNameThingsStatic(){ return modelManager->GetLstNameThingsStatic(); } void KernelManagerContour::SaveThingName(FILE* pFile, std::string name ){ modelManager->SaveThingName(pFile, name); } std::vector KernelManagerContour::GetLstNameThings(){ return modelManager->GetLstNameThings(); } //int KernelManagerContour::IsPartOfStaticList(std::string keyName ){ // return modelManager->IsPartOfStaticList(keyName); //} bool KernelManagerContour::IsPartOfStaticList(std::string theKeyName){ return modelManager->IsPartOfStaticList(theKeyName) == -1; } void KernelManagerContour::deleteCModel(std::string theKeyName){ manualContourModel* cModel = modelManager->getOutlineByKeyName(theKeyName)->getModel(); modelManager->removeOutline( theKeyName ); delete cModel; } void KernelManagerContour::removeAllOutlines(){ modelManager->removeAllOutlines(); } std::vector KernelManagerContour::getActualInstantOutlines(){ return modelManager->getActualInstantOutlines(); } int KernelManagerContour::getNamesWrappingSize(){ return getActualInstantOutlines().size(); } std::string KernelManagerContour::getNameWrapping(int i){ return getActualInstantOutlines()[i]->getKeyName(); } void KernelManagerContour::setInstant(Instant * theInstant){ modelManager->setInstant(theInstant); //_actualInstant = theInstant; } Instant * KernelManagerContour::getCurrentInstant(){ return modelManager->getInstant(); } void KernelManagerContour::setInstant(std::vector vectInstant){ Instant* act = new Instant ( &vectInstant ); modelManager->setInstant(act); } std::string KernelManagerContour::createCopyContourOf ( std::string anExistingKName, std::vector &instantNoTouchData){ return modelManager->createCopyContourOf(anExistingKName, instantNoTouchData); } manualContourModel* KernelManagerContour::getOutlineByKeyName(std::string cloneName){ return modelManager->getOutlineByKeyName (cloneName )->getModel(); } bool KernelManagerContour::onRedo(std::string& filename){ if(inredo > 0){ inredo--; inundo++; std::string str = intToString(inundo); filename = stundoredo + str + ".roi"; //loadState(temp); return true; } return false; } bool KernelManagerContour::onUndo(std::string& filename){ if(inundo>0){ inredo++; inundo--; //char str[9000]; //itoa(inundo, str, 10); std::string str = intToString(inundo); filename = stundoredo + str + ".roi"; return true;//loadState(temp); } return false; } std::string KernelManagerContour::saveState(){ inredo=0; std::string str = intToString(inundo); std::string temp = stundoredo + str + ".roi"; inundo++; return temp; } bool KernelManagerContour::onUndoSaveFile(std::string& filename){ if(inundo>0){ if(inredo==0){ //char str[9000]; //itoa(inundo, str, 10); std::string str = intToString(inundo); filename = stundoredo + str + ".roi"; return true; //saveFileWithContours(temp); } } return false; } void KernelManagerContour :: changeContourOfManager(std::string keyName, Instant *instant) { modelManager->ChangeContourOfList(keyName, instant); } void KernelManagerContour ::resetAppend(){ if(isInitContourPropagation()){ _contourPropagation->resetAppend(); } } bool KernelManagerContour::isInitContourPropagation(){ if(_contourPropagation == NULL){ _contourPropagation = new ContourPropagation(); }else{ return true; } return false; } std::string KernelManagerContour::onSpreadAdd( std::vector *vecX, std::vector *vecY, std::vector *vecZ, std::vector instants){ if(isInitContourPropagation()){ if (vecX->size()!=0){ int i,size=vecZ->size(); int actualSlice = instants[1]; for ( i=0 ; iappendContour(vecX , vecY , vecZ); return intToString(actualSlice); } } return ""; } void KernelManagerContour::getMaxMinZ(double *minZ,double *maxZ){ if(isInitContourPropagation()){ _contourPropagation->getMaxMinZ(minZ, maxZ); } } void KernelManagerContour::CalculeSplinePropagation(){ _contourPropagation->setInterpolationNumber(100); _contourPropagation->CalculeSplinePropagation(); } manualContourModel* KernelManagerContour::GetPoints(int z,int type, std::vector* vecCtrlPointX,std::vector* vecCtrlPointY,std::vector* vecCtrlPointZ, std::string& theName,int typeofcontour, std::vector tempVector){ bool addedModel = false; manualContourModel* manModelContour=NULL; if (_contourPropagation->ifSliceKeyContourExist(z)==false){ manModelContour = factoryManualContourModel( typeofcontour ); int idTmp = _contourPropagation->FindIdWithZ(z); if (type==0) // Initial Points { _contourPropagation->GetInitialControlPoints( idTmp , vecCtrlPointX,vecCtrlPointY,vecCtrlPointZ); } if (type==1) // Automatique Method { _contourPropagation->GetControlPoints( idTmp ,vecCtrlPointX,vecCtrlPointY,vecCtrlPointZ); } if (type==2) // sampling { _contourPropagation->GetControlPoints( idTmp , 20.0 ,vecCtrlPointX,vecCtrlPointY,vecCtrlPointZ); } //-------------------------------------------------------------------- int sizeCtrPt = vecCtrlPointX->size(); for (int j=0 ; jAddPoint( (*vecCtrlPointX)[j] , (*vecCtrlPointY)[j] , -900 ); //-------------------------------------------------------------------- } // for j tempVector[1]=z; theName = modelManager->createOutline( manModelContour, tempVector ); addedModel = theName.compare("") != 0; if(!addedModel){ manModelContour = NULL; } }// ifSliceKeyContourExist return manModelContour; } manualContourModel * KernelManagerContour::factoryManualContourModel(int typeContour) { manualContourModel *manModelContour=NULL; // spline if (typeContour==0) { manModelContour = new manualContourModel(); } // spline if (typeContour==1) { manModelContour = new manualContourModel(); } // rectangle if (typeContour==2) { manModelContour = new manualContourModelRoi(); } // circle if (typeContour==3) { manModelContour = new manualContourModelCircle(); } return manModelContour; } std::vector KernelManagerContour::getOutlinesNameAtInstant(std::vector tempvector){ Instant instant(&tempvector); std::vector vectcont = modelManager->getOutlinesAtInstant( &instant ); std::vector vectname; for(int i = 0; i < vectcont.size(); i++){ ContourThing **contourthing = vectcont[i]; vectname.push_back((*contourthing)->getName()); } return vectname; } std::vector KernelManagerContour::getOutlinesAtInstant(Instant* instant ){ return modelManager->getOutlinesAtInstant(instant); } std::vector KernelManagerContour::ExploseEachModel( std::vector lstManConMod ){ std::vector lstTmp; std::vector lstResult; int j,jSize; int i,iSize=lstManConMod.size(); for (i=0;iExploseModel(); jSize=lstTmp.size(); for (j=0;j& conceptNameVect, std::vector& conceptSizeVect){ modelManager-> getConceptsInformation(conceptNameVect, conceptSizeVect); } vtkImageData* KernelManagerContour::getImageAtInstant(std::vector inst){ int index = inst[5]-1; if(index < vectimages.size()&&index!=_currentIndex){ _currentIndex=index; return vectimages[index]; } return NULL; }