/*# --------------------------------------------------------------------- # # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image # pour la Sant�) # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton # Previous Authors : Laurent Guigues, Jean-Pierre Roux # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil # # This software is governed by the CeCILL-B license under French law and # abiding by the rules of distribution of free software. You can use, # modify and/ or redistribute the software under the terms of the CeCILL-B # license as circulated by CEA, CNRS and INRIA at the following URL # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html # or in the file LICENSE.txt. # # As a counterpart to the access to the source code and rights to copy, # modify and redistribute granted by the license, users are provided only # with a limited warranty and the software's author, the holder of the # economic rights, and the successive licensors have only limited # liability. # # The fact that you are presently reading this means that you have had # knowledge of the CeCILL-B license and that you accept its terms. # ------------------------------------------------------------------------ */ /*========================================================================= Program: wxMaracas Module: $RCSfile: volume.hxx,v $ Language: C++ Date: $Date: 2012/11/15 14:16:12 $ Version: $Revision: 1.9 $ Copyright: (c) 2002, 2003 License: This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notice for more information. =========================================================================*/ #ifndef KGFO__VOLUME__HXX #define KGFO__VOLUME__HXX #include "marTypes.h" #include #ifdef KGFO_USE_VTK #include #endif // KGFO_USE_VTK class creaMaracasVisu_EXPORT kVolume { public: enum Creator{ VTK, IDO, SELF }; enum Coord{ CX = 0, CY = 1, CZ = 2 }; enum Type{ CHAR = 0, FLOAT = 1, DOUBLE = 2, INT = 3, SHORT = 4, UCHAR = 5, UINT = 6, USHORT = 7 }; static const int SIZETypes[]; static const void* BLANK; static const void* NOALLOC; #ifdef KGFO_USE_VTK static const vtkIdType VTKTypes[]; #endif // KGFO_USE_VTK public: kVolume( ); kVolume( Type type, uint32_t xdim, uint32_t ydim, uint32_t zdim, double xsize = 1, double ysize = 1, double zsize = 1, void* data = 0 ); kVolume( Type type, const uint32_t *dims, const double *sizes, void* data = 0 ); kVolume( const kVolume& org ); kVolume& operator=( const kVolume& org ); void copyFrom( const kVolume& org ); virtual ~kVolume( ) { deallocate( ); } Type getType( ) const { return( _type ); } bool sameDimension( const kVolume& comp ); const uint32_t* getDimensions( ) const { return( _dims ); } uint32_t getWidth( ) const { return( _dims[ CX ] ); } uint32_t getHeight( ) const { return( _dims[ CY ] ); } uint32_t getDepth( ) const { return( _dims[ CZ ] ); } uint32_t getNcols( ) const { return( _dims[ CX ] ); } uint32_t getNrows( ) const { return( _dims[ CY ] ); } uint32_t getNplanes( ) const { return( _dims[ CZ ] ); } uint32_t getXdim( ) const { return( _dims[ CX ] ); } uint32_t getYdim( ) const { return( _dims[ CY ] ); } uint32_t getZdim( ) const { return( _dims[ CZ ] ); } void setDimensions( uint32_t* dims ) { memcpy( _dims, dims, 3 * sizeof( uint32_t ) ); } void setWidth( uint32_t w ) { _dims[ CX ] = w; } void setHeight( uint32_t h ) { _dims[ CY ] = h; } void setDepth( uint32_t d ) { _dims[ CZ ] = d; } void setNcols( uint32_t c ) { _dims[ CX ] = c; } void setNrows( uint32_t r ) { _dims[ CY ] = r; } void setNplanes( uint32_t p ) { _dims[ CZ ] = p; } void setXdim( uint32_t x ) { _dims[ CX ] = x; } void setYdim( uint32_t y ) { _dims[ CY ] = y; } void setZdim( uint32_t z ) { _dims[ CZ ] = z; } const double *getSizes( ) const { return( _sizes ); } double getXsize( ) const { return( _sizes[ CX ] ); } double getYsize( ) const { return( _sizes[ CY ] ); } double getZsize( ) const { return( _sizes[ CZ ] ); } void setSizes( double* sizes ) { memcpy( _sizes, sizes, 3 * sizeof( double ) ); } void setXsize( double x ) { _sizes[ CX ] = x; } void setYsize( double y ) { _sizes[ CY ] = y; } void setZsize( double z ) { _sizes[ CZ ] = z; } void* getData1D( ) { return( _raw ); } const void* getData1D( ) const { return( _raw ); } void** getData2D( ) { return( _columns ); } void** const getData2D( ) const { return( _columns ); } void*** getData3D( ) { return( _images ); } void*** const getData3D( ) const { return( _images ); } void reset( ) { memset( _raw, 0, getRawSizeInBytes( ) ); } ulong getRawSize( ) const { return( ( ulong )_dims[ CX ] * ( ulong )_dims[ CY ] * ( ulong )_dims[ CZ ] ); } ulong getRawSizeInBytes( ) const { return( SIZETypes[ _type ] * getRawSize( ) ); } double getPixel( uint x, uint y, uint z ) const; void setPixel( double v, uint x, uint y, uint z ); void convertCast( Type type ); void convertScale( Type type, double min, double max ); void normalize( double min, double max ) { convertScale( _type, min, max ); } void getMinMax( double& min, double& max ) const; double getMin( ) const; double getMax( ) const; //double GetMaxIntSphere( double* p, const double r ) const; unsigned short GetMaxIntSphere2( double* p, const double r ); private: void allocate( ); void buildIndex( ); void deallocate( ); protected: Type _type; Creator _creator; uint32_t _dims[ 3 ]; double _sizes[ 3 ]; void* _raw; void** _columns; void*** _images; #ifdef KGFO_USE_VTK public: /** * Creators/copiers from a vtkImageData object. * C++ creators allows you to create a kVolume cast to you vtkImageData * object, but if extent != bounds, you can expect a weird behaviour. * If you want to forget all about extents, then crop your volume or * use either the operator= or the copyFrom method. */ kVolume( vtkImageData* org ); kVolume& operator=( vtkImageData* org ); void copyFrom( vtkImageData* org ); vtkImageData* castVtk( ) const { return( _vtk ); } operator vtkImageData*( ) const { return( _vtk ); } protected: vtkImageData* _vtk; #endif // KGFO_USE_VTK }; #endif // KGFO__VOLUME__HXX // eof - volume.hxx