/* # --------------------------------------------------------------------- # # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image # pour la SantÈ) # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton # Previous Authors : Laurent Guigues, Jean-Pierre Roux # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil # # This software is governed by the CeCILL-B license under French law and # abiding by the rules of distribution of free software. You can use, # modify and/ or redistribute the software under the terms of the CeCILL-B # license as circulated by CEA, CNRS and INRIA at the following URL # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html # or in the file LICENSE.txt. # # As a counterpart to the access to the source code and rights to copy, # modify and redistribute granted by the license, users are provided only # with a limited warranty and the software's author, the holder of the # economic rights, and the successive licensors have only limited # liability. # # The fact that you are presently reading this means that you have had # knowledge of the CeCILL-B license and that you accept its terms. # ------------------------------------------------------------------------ */ //===== // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost) //===== #include "bbvtkImageBoundaries.h" #include "bbvtkPackage.h" #include "creaVtk_MACROS.h" /* #include */ namespace bbvtk { BBTK_ADD_BLACK_BOX_TO_PACKAGE(vtk,ImageBoundaries) BBTK_BLACK_BOX_IMPLEMENTATION(ImageBoundaries,bbtk::AtomicBlackBox); //===== // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost) //===== void ImageBoundaries::Process() { if (bbGetInputIn()!=NULL){ int ext[6]; double value; //EED 2017-01-01 Migration VTK7 #if (VTK_MAJOR_VERSION <= 5) bbGetInputIn()->GetWholeExtent(ext); #endif #if (VTK_MAJOR_VERSION >= 6) bbGetInputIn()->GetExtent(ext); #endif int maxX = ext[1]-ext[0]+1; int maxY = ext[3]-ext[2]+1; int maxZ = ext[5]-ext[4]+1; int bXMax = 0; int bYMax = 0; int bZMax = 0; int bXMin = maxX-1; int bYMin = maxY-1; int bZMin = maxZ-1; double lowervalue = bbGetInputLowerValue(); double uppervalue = bbGetInputUpperValue(); DEF_POINTER_IMAGE_VTK_CREA(vI,ssI,pI,stI,bbGetInputIn()) long int index=0; //int i,j; int k; int k1omp=(double)(maxZ-1)*0.0; int k2omp=(double)(maxZ-1)*0.2; int k3omp=(double)(maxZ-1)*0.4; int k4omp=(double)(maxZ-1)*0.6; int k5omp=(double)(maxZ-1)*0.8; int k6omp=(double)(maxZ-1)*1.0; printf("EED ImageBoundaries::Process (with openmp)\n"); // http://jakascorner.com/blog/2016/05/omp-for.html #pragma omp parallel shared(maxZ,bXMin,bYMin,bZMin,bXMax,bYMax,bZMax) { #pragma omp for for ( k=0 ; kGetScalarComponentAsDouble(i, j, k,0); GETVALUE2_VTK_CREA(vItmpOMP,pI,stI,index) index++; if ( (vItmpOMP>=lowervalue) && (vItmpOMP<=uppervalue) ) { if (ibXMax) bXMax = i; if (j>bYMax) bYMax = j; if (k>bZMax) bZMax = k; } } // for k } // for j } // i } // #pragma std::vector tmpIndex; std::vector tmpSize; if (bXMin>bXMax){ tmpIndex.push_back(0); tmpIndex.push_back(0); tmpIndex.push_back(0); tmpSize.push_back(1); tmpSize.push_back(1); tmpSize.push_back(1); } else { tmpIndex.push_back(bXMin); tmpIndex.push_back(bYMin); tmpIndex.push_back(bZMin); tmpSize.push_back(bXMax-bXMin+1); tmpSize.push_back(bYMax-bYMin+1); tmpSize.push_back(bZMax-bZMin+1); } bbSetOutputIndex(tmpIndex); bbSetOutputSize(tmpSize); } else { printf("bbtk warnning: bbtk:vtk:ImageBoundaries box, Input image (In) not initialized..\n"); } } //===== // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost) //===== void ImageBoundaries::bbUserSetDefaultValues() { // SET HERE THE DEFAULT INPUT/OUTPUT VALUES OF YOUR BOX bbSetInputIn(NULL); bbSetInputLowerValue(0); bbSetInputUpperValue(5000); std::vector tmpIndex; tmpIndex.push_back(0); tmpIndex.push_back(0); tmpIndex.push_back(0); std::vector tmpSize; tmpSize.push_back(1); tmpSize.push_back(1); tmpSize.push_back(1); bbSetOutputIndex(tmpIndex); bbSetOutputSize(tmpSize); } //===== // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost) //===== void ImageBoundaries::bbUserInitializeProcessing() { // THE INITIALIZATION METHOD BODY : // Here does nothing // but this is where you should allocate the internal/output pointers // if any } //===== // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost) //===== void ImageBoundaries::bbUserFinalizeProcessing() { // THE FINALIZATION METHOD BODY : // Here does nothing // but this is where you should desallocate the internal/output pointers // if any } } // EO namespace bbvtk