/*========================================================================= Program: gdcm Module: $RCSfile: gdcmSerieHelper.h,v $ Language: C++ Date: $Date: 2005/07/29 15:07:16 $ Version: $Revision: 1.15 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information. =========================================================================*/ #ifndef GDCMSERIEHELPER_H #define GDCMSERIEHELPER_H #include "gdcmCommon.h" #include "gdcmDebug.h" // for LEGACY #include #include #include namespace gdcm { class File; typedef std::vector FileList; //----------------------------------------------------------------------------- /** * \brief * - This class should be used for a stack of 2D dicom images. * It allows to explore (recursively or not) a directory and * makes a set of 'Coherent Files' list (coherent : same Serie UID) * It allows to sort any of the Coherent File list on the image position */ class GDCM_EXPORT SerieHelper { public: typedef std::map CoherentFileListmap; typedef std::vector FileVector; SerieHelper(); ~SerieHelper(); void Print(std::ostream &os = std::cout, std::string const &indent = "" ); /// \todo should return bool or throw error ? void AddFileName(std::string const &filename); void AddGdcmFile(File *header); void SetDirectory(std::string const &dir, bool recursive=false); void OrderFileList(FileList *coherentFileList); /// \brief Gets the FIRST *coherent* File List. /// Deprecated; kept not to break the API /// \note Caller must call OrderFileList first /// @return the (first) *coherent* File List const FileList &GetFileList() { return *CoherentFileListHT.begin()->second; } FileList *GetFirstCoherentFileList(); FileList *GetNextCoherentFileList(); FileList *GetCoherentFileList(std::string serieUID); /// All the following allow user to restrict DICOM file to be part /// of a particular serie GDCM_LEGACY( void AddRestriction(TagKey const &key, std::string const &value) ); void AddRestriction(uint16_t group, uint16_t elem, std::string const &value, int op); /** * \brief Sets the LoadMode as a boolean string. * NO_SEQ, NO_SHADOW, NO_SHADOWSEQ ... (nothing more, right now) * WARNING : before using NO_SHADOW, be sure *all* your files * contain accurate values in the 0x0000 element (if any) * of *each* Shadow Group. The parser will fail if the size is wrong ! * @param mode Load mode to be used */ void SetLoadMode (int mode) { LoadMode = mode; } /// Brief User wants the files to be sorted Direct Order (default value) void SetSortOrderToDirect() { DirectOrder = true; } /// Brief User wants the files to be sorted Reverse Order void SetSortOrderToReverse() { DirectOrder = false; } private: bool ImagePositionPatientOrdering(FileList *coherentFileList); bool ImageNumberOrdering(FileList *coherentFileList); bool FileNameOrdering(FileList *coherentFileList); static bool ImageNumberLessThan(File *file1, File *file2); static bool ImageNumberGreaterThan(File *file1, File *file2); static bool FileNameLessThan(File *file1, File *file2); static bool FileNameGreaterThan(File *file1, File *file2); //Attributes: CoherentFileListmap CoherentFileListHT; CoherentFileListmap::iterator ItListHt; typedef std::pair Rule; typedef std::vector SerieRestrictions; SerieRestrictions Restrictions; // New style for (extented) Rules (Moreover old one doesn't compile) typedef struct { uint16_t group; uint16_t elem; std::string value; int op; } ExRule; typedef std::vector SerieExRestrictions; SerieExRestrictions ExRestrictions; /// \brief Bit string integer (each one considered as a boolean) /// Bit 0 : Skip Sequences, if possible /// Bit 1 : Skip Shadow Groups if possible /// Probabely, some more to add int LoadMode; /// \brief whether we want to sort in direct order or not (reverse order). /// To be used by aware user only bool DirectOrder; }; } // end namespace gdcm //----------------------------------------------------------------------------- #endif