#File clitkGammaIndex.ggo package "clitkGammaIndex" version "1.0" purpose "Compute the gamma index map for target dose map vs reference dose map. If verbose is given, the ratio of gamma>1 pixels of the total pixel in the image is computed. Absolute dose margin has priority over relative dose margin. The relative dose margin is relative to the maximum dose in the reference image. Reference and target images must share the same origin, the same spacing and the same size." option "verbose" v "Verbose" flag off option "reference" i "Reference dose map" string yes option "target" j "Target dose map" string yes option "output" o "Output image filename" string yes option "spatial-margin" s "Spatial margin [mm]" double yes option "relative-dose-margin" r "Dose margin relative to max dose in reference [%]" double no option "absolute-dose-margin" d "Absolute dose margin [Gray]" double no option "isodose-number" n "Number of isodose computed in distance map" int default="128" no