/*========================================================================= Program: gdcm Module: $RCSfile: vtkGdcmReader.h,v $ Language: C++ Date: $Date: 2005/08/22 12:38:01 $ Version: $Revision: 1.26 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information. =========================================================================*/ #ifndef __vtkGdcmReader_h #define __vtkGdcmReader_h #include "gdcmCommon.h" // To avoid warnings concerning the std #include "gdcmFile.h" #include #include #include #include typedef void (*VOID_FUNCTION_PUINT8_PFILE_POINTER)(uint8_t *, gdcm::File *); //----------------------------------------------------------------------------- class vtkLookupTable; //----------------------------------------------------------------------------- class VTK_EXPORT vtkGdcmReader : public vtkImageReader { public: static vtkGdcmReader *New(); vtkTypeRevisionMacro(vtkGdcmReader, vtkImageReader); void PrintSelf(ostream& os, vtkIndent indent); virtual void RemoveAllFileName(void); virtual void AddFileName(const char *name); virtual void SetFileName(const char *name); void SetCoherentFileList( std::vector *cfl) { CoherentFileList = cfl; } vtkSetMacro(AllowLightChecking, int); vtkGetMacro(AllowLightChecking, int); vtkBooleanMacro(AllowLightChecking, int); void SetUserFunction (VOID_FUNCTION_PUINT8_PFILE_POINTER userFunc ) { UserFunction = userFunc; } // Description: // If this flag is set and the DICOM reader encounters a dicom file with // lookup table the data will be kept as unsigned chars and a lookuptable // will be exported and accessible through GetLookupTable() vtkSetMacro(AllowLookupTable, int); vtkGetMacro(AllowLookupTable, int); vtkBooleanMacro(AllowLookupTable, int); vtkGetObjectMacro(LookupTable, vtkLookupTable); /** * \brief Sets the LoadMode as a boolean string. * NO_SEQ, NO_SHADOW, NO_SHADOWSEQ... (nothing more, right now) * WARNING : before using NO_SHADOW, be sure *all* your files * contain accurate values in the 0x0000 element (if any) * of *each* Shadow Group. The parser will fail if the size is wrong ! * @param mode Load mode to be used */ // void SetLoadMode (int mode) { LoadMode = mode; } vtkSetMacro(LoadMode, int); vtkGetMacro(LoadMode, int); vtkBooleanMacro(LoadMode, int); protected: vtkGdcmReader(); ~vtkGdcmReader(); virtual void ExecuteInformation(); virtual void ExecuteData(vtkDataObject *output); virtual void BuildFileListFromPattern(); virtual int CheckFileCoherence(); virtual int CheckFileCoherenceLight(); virtual int CheckFileCoherenceAlreadyDone(); private: void RemoveAllInternalFileName(void); void AddInternalFileName(const char* name); //BTX size_t LoadImageInMemory(std::string fileName, unsigned char *dest, const unsigned long updateProgressTarget, unsigned long &updateProgressCount); size_t LoadImageInMemory(gdcm::File *f, unsigned char *dest, const unsigned long updateProgressTarget, unsigned long &updateProgressCount); size_t DoTheLoadingJob (gdcm::File *f, unsigned char *dest, const unsigned long updateProgressTarget, unsigned long &updateProgressCount); //ETX // Variables vtkLookupTable *LookupTable; vtkTimeStamp fileTime; int AllowLookupTable; int AllowLightChecking; //BTX // Number of columns of the image/volume to be loaded int NumColumns; // Number of lines of the image/volume to be loaded int NumLines; // Total number of planes (or images) of the stack to be build. int TotalNumberOfPlanes; // Number of scalar components of the image to be loaded (1=monochrome 3=rgb) int NumComponents; // Type of the image[s]: 8/16/32 bits, signed/unsigned: std::string ImageType; // Pixel size (in number of bytes): size_t PixelSize; // List of filenames to be read in order to build a stack of images // or volume. The order in the list shall be the order of the images. std::list FileNameList; // List of filenames created in ExecuteInformation and used in // ExecuteData. // If FileNameList isn't empty, InternalFileNameList is a copy of // FileNameList // Otherwise, InternalFileNameList correspond to the list of // files patterned std::list InternalFileNameList; std::vector *CoherentFileList; //ETX /// \brief Bit string integer (each one considered as a boolean) /// Bit 0 : Skip Sequences, if possible /// Bit 1 : Skip Shadow Groups if possible /// Bit 2 : Skip Sequences inside a Shadow Group, if possible /// Probabely (?), some more to add int LoadMode; /// Pointer to a user suplied function to allow modification of pixel order VOID_FUNCTION_PUINT8_PFILE_POINTER UserFunction; }; //----------------------------------------------------------------------------- #endif