-#=========================================================
-INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
-#=========================================================
-
#=========================================================
# make clitk libraries*
CONFIGURE_FILE(clitkConfiguration.h.in ${PROJECT_BINARY_DIR}/clitkConfiguration.h)
clitkImageCommon.cxx
clitkTransformUtilities.cxx
clitkIO.cxx
+ clitkGateAsciiImageIO.cxx
+ clitkGateAsciiImageIOFactory.cxx
clitkVoxImageIO.cxx
clitkVoxImageIOFactory.cxx
clitkVfImageIO.cxx
clitkVfImageIOFactory.cxx
- clitkHisImageIO.cxx
- clitkHisImageIOFactory.cxx
clitkXdrImageIOReader.cxx
clitkXdrImageIOWriter.cxx
clitkXdrImageIOFactory.cxx
- clitkHndImageIO.cxx
- clitkHndImageIOFactory.cxx
+ rtkHisImageIO.cxx
+ rtkHisImageIOFactory.cxx
+ rtkHndImageIO.cxx
+ rtkHndImageIOFactory.cxx
+ rtkEdfImageIO.cxx
+ rtkEdfImageIOFactory.cxx
+ rtkImagXImageIO.cxx
+ rtkImagXImageIOFactory.cxx
+ rtkImagXXMLFileReader.cxx
+ clitkEsrfHstImageIO.cxx
+ clitkEsrfHstImageIOFactory.cxx
+ clitkEsrfHstXMLFileReader.cxx
clitkDicomRTDoseIO.cxx
clitkDicomRTDoseIOFactory.cxx
clitkOrientation.cxx
- vvImage.cxx
clitkImageToImageGenericFilterBase.cxx
clitkExceptionObject.cxx
clitkFilterBase.cxx
-)
-
-### if LIBSTATGRAB is installed, add clitkMemoryUsage.cxx in the library
-IF(CLITK_MEMORY_INFO)
- FIND_PROGRAM(LIBSTATGRAB NAMES statgrab PATHS)
- IF (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
- MESSAGE( FATAL_ERROR "libstatgrab NOT FOUND -> please install http://www.i-scream.org/libstatgrab/")
- ELSE (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
- SET(clitkCommon_SRC ${clitkCommon_SRC} clitkMemoryUsage.cxx)
- ENDIF (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
-ENDIF(CLITK_MEMORY_INFO)
+ clitkMemoryUsage.cxx
+ vvImage.cxx
+ vvImageReader.cxx
+ vvImageWriter.cxx
+)
+IF(CLITK_PRIVATE_FEATURES)
+ SET(clitkCommon_SRC ${clitkCommon_SRC}
+ ${PROJECT_SOURCE_DIR}/private_features/clitkUsfImageIO.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkUsfImageIOFactory.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkUSVoxImageIO.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkUSVoxImageIOFactory.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkSvlImageIO.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkSvlImageIOFactory.cxx
+ )
+ENDIF(CLITK_PRIVATE_FEATURES)
### Declare clitkCommon library
ADD_LIBRARY(clitkCommon STATIC ${clitkCommon_SRC})
-### Add libstatgrab if needed
-IF(CLITK_MEMORY_INFO)
- TARGET_LINK_LIBRARIES(clitkCommon statgrab)
-ENDIF(CLITK_MEMORY_INFO)
+IF(NOT ${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
+ TARGET_LINK_LIBRARIES(clitkCommon statgrab)
+ENDIF(NOT ${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
+
+### Check if ITK was compiled with SYSTEM_GDCM = ON and set the gdcm libraries accordingly
+SET(CLITK_USE_SYSTEM_GDCM FALSE)
+IF(ITK_VERSION_MAJOR LESS "4")
+ IF(ITK_USE_SYSTEM_GDCM)
+ SET(CLITK_USE_SYSTEM_GDCM TRUE)
+ ENDIF(ITK_USE_SYSTEM_GDCM)
+ELSE(ITK_VERSION_MAJOR LESS "4")
+ SET(GDCM_INCLUDE_INSTALL ".*include/gdcm-.*")
+ SET(GDCM_INCLUDE_BUILD ".*/Source/MediaStorageAndFileFormat")
+ IF(ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE_BUILD} OR ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE_INSTALL})
+ SET(CLITK_USE_SYSTEM_GDCM TRUE)
+ ENDIF(ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE_BUILD} OR ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE_INSTALL})
+ENDIF(ITK_VERSION_MAJOR LESS "4")
+
+IF(CLITK_USE_SYSTEM_GDCM)
+ SET(CLITK_GDCM_LIBRARIES gdcmDSED)
+ENDIF(CLITK_USE_SYSTEM_GDCM)
-TARGET_LINK_LIBRARIES(clitkCommon vtkCommon vtkImaging vtkHybrid ITKBasicFilters)
+TARGET_LINK_LIBRARIES(clitkCommon vtkCommon vtkImaging ${ITK_LIBRARIES} ${CLITK_GDCM_LIBRARIES})
ADD_LIBRARY(clitkDicomRTStruct STATIC
clitkDicomRT_Contour.cxx
clitkDicomRT_ROI.cxx
clitkDicomRT_StructureSet.cxx
- clitkDicomRT_ROI_ConvertToImageFilter.cxx
+ clitkDicomRTStruct2ImageFilter.cxx
)
+TARGET_LINK_LIBRARIES(clitkDicomRTStruct vtkHybrid ${CLITK_GDCM_LIBRARIES})
+
#ADD_LIBRARY(clitkCommonShared SHARED ${clitkCommon_SRC})
#SET_TARGET_PROPERTIES(clitkCommonShared PROPERTIES COMPILE_FLAGS -fPIC)
+