#=========================================================
# Add Libraries used in vv and clitk to avoid recompilation
-FOREACH(clitkTool clitkExtractLung clitkExtractPatient)
+FOREACH(clitkTool clitkExtractLung clitkExtractPatient clitkConnectedComponentLabeling clitkRegionGrowing)
WRAP_GGO(${clitkTool}_GGO_C ${clitkTool}.ggo)
SET(GGO_C_FILES ${GGO_C_FILES} ${${clitkTool}_GGO_C})
ENDFOREACH(clitkTool)
ADD_LIBRARY(clitkSegmentationGgoLib
clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx
clitkAnatomicalFeatureDatabase.cxx
+ clitkSliceBySliceRelativePositionFilter_uchar.cxx
${GGO_C_FILES})
#=========================================================
IF(CLITK_BUILD_SEGMENTATION)
WRAP_GGO(clitkConnectedComponentLabeling_GGO_C clitkConnectedComponentLabeling.ggo)
ADD_EXECUTABLE(clitkConnectedComponentLabeling clitkConnectedComponentLabeling.cxx ${clitkConnectedComponentLabeling_GGO_C})
- TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon ${ITK_LIBRARIES})
+ TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon)
SET(SEGMENTATION_INSTALL clitkConnectedComponentLabeling)
ADD_EXECUTABLE(clitkExtractPatient clitkExtractPatient.cxx ${clitkExtractPatient_GGO_C})
- TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
+ TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon clitkSegmentationGgoLib)
SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractPatient)
ADD_EXECUTABLE(clitkExtractLung clitkExtractLung.cxx ${clitkExtractLung_GGO_C})
- TARGET_LINK_LIBRARIES(clitkExtractLung clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
+ TARGET_LINK_LIBRARIES(clitkExtractLung clitkSegmentationGgoLib clitkCommon)
SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractLung)
WRAP_GGO(clitkExtractBones_GGO_C clitkExtractBones.ggo)
ADD_EXECUTABLE(clitkExtractBones clitkExtractBones.cxx ${clitkExtractBones_GGO_C})
- TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
+ TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon clitkSegmentationGgoLib)
SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractBones)
-
- WRAP_GGO(clitkRelativePosition_GGO_C ../tools/clitkRelativePosition.ggo)
-
- WRAP_GGO(clitkExtractLymphStations_GGO_C clitkExtractLymphStations.ggo)
- ADD_EXECUTABLE(clitkExtractLymphStations clitkExtractLymphStations.cxx clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx ${clitkExtractLymphStations_GGO_C} ${clitkRelativePosition_GGO_C})
- TARGET_LINK_LIBRARIES(clitkExtractLymphStations clitkSegmentationGgoLib clitkCommon vtkHybrid)
- SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractLymphStations)
-
- WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo)
+ WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo)
ADD_EXECUTABLE(clitkMorphoMath clitkMorphoMath.cxx ${clitkMorphoMath_GGO_C})
- TARGET_LINK_LIBRARIES(clitkMorphoMath clitkCommon ${ITK_LIBRARIES})
+ TARGET_LINK_LIBRARIES(clitkMorphoMath clitkCommon)
SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkMorphoMath)
WRAP_GGO(clitkDecomposeAndReconstruct_GGO_C clitkDecomposeAndReconstruct.ggo)
ADD_EXECUTABLE(clitkDecomposeAndReconstruct clitkDecomposeAndReconstruct.cxx clitkDecomposeAndReconstructGenericFilter.cxx ${clitkDecomposeAndReconstruct_GGO_C})
- TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ${ITK_LIBRARIES})
+ TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon)
SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkDecomposeAndReconstruct)
WRAP_GGO(clitkMotionMask_GGO_C clitkMotionMask.ggo)
ADD_EXECUTABLE(clitkMotionMask clitkMotionMask.cxx clitkMotionMaskGenericFilter.cxx ${clitkMotionMask_GGO_C})
- TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ${ITK_LIBRARIES})
+ TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon)
SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkMotionMask)
-
- # WRAP_GGO(clitkTestFilter_GGO_C clitkTestFilter.ggo)
- # ADD_EXECUTABLE(clitkTestFilter clitkTestFilter.cxx ${clitkTestFilter_GGO_C})
- # TARGET_LINK_LIBRARIES(clitkTestFilter clitkSegmentationGgoLib clitkCommon vtkHybrid)
- # SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkTestFilter)
- SET_TARGET_PROPERTIES(${SEGMENTATION_INSTALL} PROPERTIES INSTALL_RPATH "${VTK_DIR}:${ITK_DIR}" )
+ WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo)
+ ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx ${clitkRegionGrowing_GGO_C} ${clitkRelativePosition_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon)
+
INSTALL (TARGETS ${SEGMENTATION_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
ENDIF(CLITK_BUILD_SEGMENTATION)
# ADD_EXECUTABLE(ScalarImageMarkovRandomField1 ScalarImageMarkovRandomField1.cxx)
-# TARGET_LINK_LIBRARIES(ScalarImageMarkovRandomField1 clitkCommon ${ITK_LIBRARIES} ITKStatistics)
+# TARGET_LINK_LIBRARIES(ScalarImageMarkovRandomField1 clitkCommon ITKStatistics)
# ADD_EXECUTABLE(ScalarImageKmeansClassifier ScalarImageKmeansClassifier.cxx)
-# TARGET_LINK_LIBRARIES(ScalarImageKmeansClassifier clitkCommon ${ITK_LIBRARIES} ITKStatistics)
+# TARGET_LINK_LIBRARIES(ScalarImageKmeansClassifier clitkCommon ITKStatistics)