WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
ADD_LIBRARY(clitkMedianImageFilterLib clitkMedianImageGenericFilter.cxx ${clitkMedianImageFilter_GGO_C})
+#=========================================================
IF (CLITK_BUILD_TOOLS)
+
WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
ADD_EXECUTABLE(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
TARGET_LINK_LIBRARIES(clitkDicomInfo clitkCommon)
WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
ADD_EXECUTABLE(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
- ${clitkMedianTemporalDimension_GGO_C})
+ ${clitkMedianTemporalDimension_GGO_C})
TARGET_LINK_LIBRARIES(clitkMedianTemporalDimension clitkCommon )
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianTemporalDimension)
TARGET_LINK_LIBRARIES(clitkAffineTransform clitkCommon )
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform)
+ WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo)
+ ADD_EXECUTABLE(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkElastixTransformToMatrix clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix)
+
+ WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo)
+ ADD_EXECUTABLE(clitkMatrixToElastixTransform clitkMatrixToElastixTransform.cxx ${clitkMatrixToElastixTransform_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMatrixToElastixTransform clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixToElastixTransform)
+
+ WRAP_GGO(clitkMatrixMultiply_GGO_C clitkMatrixMultiply.ggo)
+ ADD_EXECUTABLE(clitkMatrixMultiply clitkMatrixMultiply.cxx ${clitkMatrixMultiply_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMatrixMultiply clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixMultiply)
+
+ WRAP_GGO(clitkMatrixInverse_GGO_C clitkMatrixInverse.ggo)
+ ADD_EXECUTABLE(clitkMatrixInverse clitkMatrixInverse.cxx ${clitkMatrixInverse_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMatrixInverse clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixInverse)
+
WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
ADD_EXECUTABLE(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
TARGET_LINK_LIBRARIES(clitkSetBackground clitkCommon)
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground)
- WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
+ WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
ADD_EXECUTABLE(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
TARGET_LINK_LIBRARIES(clitkGammaIndex clitkCommon)
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
ADD_EXECUTABLE(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
- TARGET_LINK_LIBRARIES(clitkUnsharpMask clitkCommon )
+ TARGET_LINK_LIBRARIES(clitkUnsharpMask clitkCommon )
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
WRAP_GGO(clitkFooImage_GGO_C clitkFooImage.ggo)
ADD_EXECUTABLE(clitkFooImage clitkFooImage.cxx ${clitkFooImage_GGO_C})
- TARGET_LINK_LIBRARIES(clitkFooImage clitkCommon )
+ TARGET_LINK_LIBRARIES(clitkFooImage clitkCommon )
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFooImage)
- #WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
- #ADD_EXECUTABLE(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
- #TARGET_LINK_LIBRARIES(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
- #SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
+ WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
+ ADD_EXECUTABLE(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
ADD_EXECUTABLE(clitkResampleImage clitkResampleImage.cxx)
TARGET_LINK_LIBRARIES(clitkResampleImage clitkResampleImageLib clitkCommon)
# ADD_EXECUTABLE(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
# TARGET_LINK_LIBRARIES(clitkExtractSlice clitkCommon)
#SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
-
+
WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
ADD_EXECUTABLE(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
TARGET_LINK_LIBRARIES(clitkFlipImage clitkCommon)
ADD_EXECUTABLE(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
TARGET_LINK_LIBRARIES(clitkJacobianImage clitkCommon)
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
-
+
WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
ADD_EXECUTABLE(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
TARGET_LINK_LIBRARIES(clitkPadImage clitkCommon)
WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
ADD_EXECUTABLE(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
- clitkAnisotropicDiffusionGenericFilter.cxx
- ${clitkAnisotropicDiffusion_GGO_C})
+ clitkAnisotropicDiffusionGenericFilter.cxx
+ ${clitkAnisotropicDiffusion_GGO_C})
TARGET_LINK_LIBRARIES(clitkAnisotropicDiffusion clitkCommon)
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
+ WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
+ ADD_EXECUTABLE(clitkChangeImageInfo clitkChangeImageInfo.cxx
+ clitkChangeImageInfoGenericFilter.cxx
+ ${clitkChangeImageInfo_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkChangeImageInfo clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
+
+ WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
+ ADD_EXECUTABLE(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
+
+ WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
+ ADD_EXECUTABLE(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
+ TARGET_LINK_LIBRARIES(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
+
+ WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
+ ADD_EXECUTABLE(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageGradientMagnitude clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
+
+ WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
+ ADD_EXECUTABLE(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageLaplacian clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
+
+ WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
+ ADD_EXECUTABLE(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageIntensityWindowing clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
+
+
+ #=========================================================
+ option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
+ if (CLITK_USE_ROOT)
+ FIND_PACKAGE(ROOT REQUIRED)
+ if(ROOT_FOUND)
+ MESSAGE(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
+ ELSE(ROOT_FOUND)
+ MESSAGE(FATAL_ERROR
+ "Cannot build without ROOT. Please set ROOTSYS environement variable.")
+ endif(ROOT_FOUND)
+ INCLUDE_DIRECTORIES(${ROOT_INCLUDE_DIR})
+ LINK_DIRECTORIES(${ROOT_LIBRARY_DIR})
+ WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
+ ADD_EXECUTABLE(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMergeRootFiles ${ROOT_LIBRARIES})
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
+ endif()
+ #=========================================================
+
+
+ #=========================================================
IF(CLITK_EXPERIMENTAL)
WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
ADD_EXECUTABLE(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
- TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh itksys ${ITK_LIBRARIES} ${VTK_LIBRARIES})
+ TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh clitkCommon)
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
ADD_EXECUTABLE(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
- TARGET_LINK_LIBRARIES(clitkMeshViewer ${ITK_LIBRARIES} ${VTK_LIBRARIES})
+ TARGET_LINK_LIBRARIES(clitkMeshViewer clitkCommon)
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
ENDIF(CLITK_EXPERIMENTAL)
+ #=========================================================
+
+ #=========================================================
IF(ITK_VERSION_MAJOR VERSION_LESS 4)
+ MESSAGE("clitkDice is not compatible with ITK<4. It will not be built.")
MESSAGE("clitkDicomRTPlan2Gate is not compatible with GDCM<2 (ITK<4). It will not be built.")
ELSE(ITK_VERSION_MAJOR VERSION_LESS 4)
+ WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
+ ADD_EXECUTABLE(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
+
WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
ADD_EXECUTABLE(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
TARGET_LINK_LIBRARIES(clitkDicomRTPlan2Gate clitkCommon)
SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
ENDIF(ITK_VERSION_MAJOR VERSION_LESS 4)
+ #=========================================================
+
INSTALL (TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
ENDIF(CLITK_BUILD_TOOLS)
-