-ADD_SUBDIRECTORY(common)
-ADD_SUBDIRECTORY(tools)
-ADD_SUBDIRECTORY(segmentation)
-ADD_SUBDIRECTORY(registration)
-
-
-# Compilation options
-OPTION(CLITK_EXPERIMENTAL "Enable experimental software and features" OFF)
-OPTION(CLITK_BUILD_TOOLS "Build command-line tools" OFF)
-OPTION(CLITK_BUILD_SEGMENTATION "Build command-line segmentation tools" OFF)
-OPTION(CLITK_BUILD_REGISTRATION "Build command-line registration tools" OFF)
-
-OPTION(CLITK_BUILD_VV "Build vv the 4D visualizer (requires VTK and QT)" ON)
-IF (CLITK_BUILD_VV)
- ADD_SUBDIRECTORY(vv)
-ENDIF(CLITK_BUILD_VV)
-
-
-#=========================================================
-# Build test when vv has been compiled
-IF(BUILD_TESTING)
- ADD_SUBDIRECTORY(tests)
-ENDIF(BUILD_TESTING)
-
-#=========================================================
-# Install scripts when running make install
-SET(SCRIPTS
- scripts/midp_common.sh
- scripts/registration.sh
- scripts/create_midP.sh
- scripts/create_midP-2.0.sh
- scripts/create_mhd_4D.sh
- scripts/create_mhd_4D_pattern.sh
- scripts/create_midP_masks.sh
- scripts/create_midP_masks-2.0.sh
- scripts/pts_to_landmarks.sh
- scripts/create_mhd_3D.sh
- scripts/create_sequence.sh
- scripts/dcm_sort_by_field.sh
- scripts/dicom_info.sh
-)
-
-INSTALL (FILES ${SCRIPTS} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
-
+add_subdirectory(${CLITK_SOURCE_DIR}/common ${PROJECT_BINARY_DIR}/common)
+add_subdirectory(${CLITK_SOURCE_DIR}/tools ${PROJECT_BINARY_DIR}/tools)
+add_subdirectory(${CLITK_SOURCE_DIR}/segmentation ${PROJECT_BINARY_DIR}/segmentation)
+add_subdirectory(${CLITK_SOURCE_DIR}/registration ${PROJECT_BINARY_DIR}/registration)
+add_subdirectory(${CLITK_SOURCE_DIR}/cluster_tools ${PROJECT_BINARY_DIR}/cluster_tools)