+doseMerger="mergeDoseByRegions.sh"
+test -x "./mergeDoseByRegions.sh" && doseMerger="./mergeDoseByRegions.sh"
+
+function merge_doseByRegions {
+ local merged="$1"
+ shift
+ echo " ${indent}entering dose merger"
+ echo " ${indent}merger is ${doseMerger}"
+ echo " ${indent}creating ${merged}"
+ local count=0
+ start_bar $#
+ while test $# -gt 0
+ do
+ local partial="$1"
+ shift
+ let count++
+
+ if test ! -f "${merged}"
+ then
+ update_bar ${count} "copying first partial result ${partial}"
+ cp "${partial}" "${merged}"
+ continue
+ fi
+
+ update_bar ${count} "adding ${partial}"
+ ${doseMerger} -i "${merged}" -j "${partial}" -o "${merged}" 2> /dev/null > /dev/null || warning "error while calling ${doseMerger}"
+ done
+ end_bar
+ echo " ${indent}merged ${count} files"
+}
+