+ template<class ImageType>
+ typename ImageType::Pointer
+ JoinSlices(std::vector<typename itk::Image<typename ImageType::PixelType,
+ ImageType::ImageDimension-1>::Pointer > & slices,
+ typename ImageType::Pointer input,
+ int dim);
+ //--------------------------------------------------------------------
+
+
+ //--------------------------------------------------------------------
+ // Set of tools to manage 3D points and 2D points in slices
+ template<class ImageType>
+ class PointsUtils
+ {
+ typedef typename ImageType::PointType PointType3D;
+ typedef typename ImageType::PixelType PixelType;
+ typedef typename ImageType::Pointer ImagePointer;
+ typedef typename ImageType::ConstPointer ImageConstPointer;
+ typedef itk::Image<PixelType, 2> SliceType;
+ typedef typename SliceType::PointType PointType2D;
+
+ typedef std::map<int, PointType2D> MapPoint2DType;
+ typedef std::vector<PointType3D> VectorPoint3DType;
+ public:
+ static void Convert2DTo3D(const PointType2D & p2D,
+ ImagePointer image,
+ const int slice,
+ PointType3D & p3D);
+ static void Convert2DTo3DList(const MapPoint2DType & map,
+ ImagePointer image,
+ VectorPoint3DType & list);
+ };
+
+ //--------------------------------------------------------------------
+ template<class ImageType>
+ void
+ WriteListOfLandmarks(std::vector<typename ImageType::PointType> points,
+ std::string filename);
+ //--------------------------------------------------------------------
+
+
+ //--------------------------------------------------------------------
+ template<class ImageType>
+ typename ImageType::Pointer
+ Dilate(typename ImageType::Pointer image,
+ double radiusInMM,
+ typename ImageType::PixelType BG,
+ typename ImageType::PixelType FG,
+ bool extendSupport);
+ template<class ImageType>
+ typename ImageType::Pointer
+ Dilate(typename ImageType::Pointer image,
+ typename ImageType::SizeType radius,
+ typename ImageType::PixelType BG,
+ typename ImageType::PixelType FG,
+ bool extendSupport);
+ template<class ImageType>
+ typename ImageType::Pointer
+ Dilate(typename ImageType::Pointer image,
+ typename ImageType::PointType radiusInMM,
+ typename ImageType::PixelType BG,
+ typename ImageType::PixelType FG,
+ bool extendSupport);
+ //--------------------------------------------------------------------
+
+ //--------------------------------------------------------------------
+ template<class ValueType, class VectorType>
+ void ConvertOption(std::string optionName, uint given,
+ ValueType * values, VectorType & p,
+ uint dim, bool required);
+#define ConvertOptionMacro(OPTIONNAME, VAR, DIM, REQUIRED) \
+ ConvertOption(#OPTIONNAME, OPTIONNAME##_given, OPTIONNAME##_arg, VAR, DIM, REQUIRED);
+