for(uint i=0; i<mArgsInfoList.size(); i++) {
// clitk::PrintMemory(true, "Start");
for(uint i=0; i<mArgsInfoList.size(); i++) {
// clitk::PrintMemory(true, "Start");
- std::string text = "["+s+"] limits ";
+ // remove _S in station name
+ std::string sname = s;
+ clitk::findAndReplace<std::string>(sname, "_S", " ");
+ std::string text = "["+sname+"] ";
if (mArgsInfoList[i].orientation_given) text += std::string(mArgsInfoList[i].orientation_arg[0])+" ";
else text = text+"("+toString(mArgsInfoList[i].angle1_arg)+" "+
toString(mArgsInfoList[i].angle2_arg)+" "+
(mArgsInfoList[i].inverse_flag?"true":"false")+") ";
text = text+mArgsInfoList[i].object_arg+" "+toString(mArgsInfoList[i].threshold_arg);
if (mArgsInfoList[i].sliceBySlice_flag) {
if (mArgsInfoList[i].orientation_given) text += std::string(mArgsInfoList[i].orientation_arg[0])+" ";
else text = text+"("+toString(mArgsInfoList[i].angle1_arg)+" "+
toString(mArgsInfoList[i].angle2_arg)+" "+
(mArgsInfoList[i].inverse_flag?"true":"false")+") ";
text = text+mArgsInfoList[i].object_arg+" "+toString(mArgsInfoList[i].threshold_arg);
if (mArgsInfoList[i].sliceBySlice_flag) {
filter->SetInput(0, m_working_input);
filter->SetInput(1, m_reference);
filter->Update();
filter->SetInput(0, m_working_input);
filter->SetInput(1, m_reference);
filter->Update();
ImagePointer object = GetAFDB()->template GetImage<ImageType>(options.object_arg);
filter->SetInputObject(object);
filter->WriteStepFlagOff();
ImagePointer object = GetAFDB()->template GetImage<ImageType>(options.object_arg);
filter->SetInputObject(object);
filter->WriteStepFlagOff();
if (options.writeStep_flag) filter->WriteStepFlagOn();
filter->SetVerboseImageSizeFlag(GetVerboseImageSizeFlag());
filter->SetFuzzyThreshold(options.threshold_arg);
filter->SetInverseOrientationFlag(options.inverse_flag); // MUST BE BEFORE AddOrientationTypeString
if (options.writeStep_flag) filter->WriteStepFlagOn();
filter->SetVerboseImageSizeFlag(GetVerboseImageSizeFlag());
filter->SetFuzzyThreshold(options.threshold_arg);
filter->SetInverseOrientationFlag(options.inverse_flag); // MUST BE BEFORE AddOrientationTypeString