- /// \brief returns the SQITEM chained List for this SeQuence.
- inline ListSQItem &GetSQItems() {return items;};
+ void Print(std::ostream &os = std::cout, std::string const &indent = "" );
+ void WriteContent(std::ofstream *fp, FileType filetype);
+ uint32_t ComputeFullLength();
+
+ void AddSQItem(SQItem *it, int itemNumber);
+ void ClearSQItem();
+ SQItem *GetFirstSQItem();
+ SQItem *GetNextSQItem();
+ SQItem *GetSQItem(int itemNumber);
+ unsigned int GetNumberOfSQItems();