+ add_executable(clitkImageArithm clitkImageArithm.cxx)
+ target_link_libraries(clitkImageArithm clitkImageArithmImageLib clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageArithm)
+
+ add_executable(clitkVectorArithm clitkVectorArithm.cxx)
+ target_link_libraries(clitkVectorArithm clitkVectorArithmLib clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorArithm)
+
+ WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
+ add_executable(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
+ target_link_libraries(clitkUnsharpMask clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
+
+ WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
+ add_executable(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
+ target_link_libraries(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
+
+ add_executable(clitkResampleImage clitkResampleImage.cxx)
+ target_link_libraries(clitkResampleImage clitkResampleImageLib clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkResampleImage)
+
+ WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
+ add_executable(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
+ target_link_libraries(clitkMinMaxMask clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMinMaxMask)
+
+ WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
+ add_executable(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
+ target_link_libraries(clitkAutoCrop clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
+
+ WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
+ add_executable(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
+ target_link_libraries(clitkDicomRTStruct2Image clitkDicomRTStruct)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
+
+ #if(CLITK_USE_SYSTEM_GDCM)
+ WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
+ add_executable(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
+ target_link_libraries(clitkImage2DicomRTStruct clitkDicomRTStruct)
+ #endif()
+
+ WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
+ add_executable(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
+ target_link_libraries(clitkComposeVF clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkComposeVF)
+
+ WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
+ add_executable(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
+ target_link_libraries(clitkMergeSequence clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeSequence)
+
+ WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
+ add_executable(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
+ target_link_libraries(clitkBackProjectImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBackProjectImage)
+
+ add_executable(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
+ target_link_libraries(clitkCropImage clitkCropImageLib clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCropImage)
+
+ # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
+ # add_executable(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
+ # target_link_libraries(clitkExtractSlice clitkCommon)
+ #set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
+
+ WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
+ add_executable(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
+ target_link_libraries(clitkFlipImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFlipImage)
+
+ WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
+ add_executable(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
+ target_link_libraries(clitkMirrorPadImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMirrorPadImage)
+
+ WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
+ add_executable(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
+ target_link_libraries(clitkImageMoment clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment)
+
+ WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
+ add_executable(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
+ target_link_libraries(clitkImageStatistics clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics)
+
+ WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
+ add_executable(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
+ target_link_libraries(clitkVFConvert clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFConvert)
+
+ WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
+ add_executable(clitkImageToVectorImage clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
+ target_link_libraries(clitkImageToVectorImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageToVectorImage)
+
+ WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
+ add_executable(clitkVectorImageToImage clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
+ target_link_libraries(clitkVectorImageToImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage)
+
+ WRAP_GGO(clitkNVectorImageTo4DImage_GGO_C clitkNVectorImageTo4DImage.ggo)
+ add_executable(clitkNVectorImageTo4DImage clitkNVectorImageTo4DImage.cxx clitkNVectorImageTo4DImageGenericFilter.cxx ${clitkNVectorImageTo4DImage_GGO_C})
+ target_link_libraries(clitkNVectorImageTo4DImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNVectorImageTo4DImage)
+
+ WRAP_GGO(clitk4DImageToNVectorImage_GGO_C clitk4DImageToNVectorImage.ggo)
+ add_executable(clitk4DImageToNVectorImage clitk4DImageToNVectorImage.cxx clitk4DImageToNVectorImageGenericFilter.cxx ${clitk4DImageToNVectorImage_GGO_C})
+ target_link_libraries(clitk4DImageToNVectorImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitk4DImageToNVectorImage)
+
+ add_executable(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx)
+ target_link_libraries(clitkMIP clitkMIPLib clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP)
+
+ WRAP_GGO(clitkSum_GGO_C clitkSum.ggo)
+ add_executable(clitkSum clitkSum.cxx ${clitkSum_GGO_C})
+ target_link_libraries(clitkSum clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSum)
+
+ WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
+ add_executable(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
+ target_link_libraries(clitkTransformLandmarks clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks)
+
+ WRAP_GGO(clitkMaskLandmarks_GGO_C clitkMaskLandmarks.ggo)
+ add_executable(clitkMaskLandmarks clitkMaskLandmarks.cxx ${clitkMaskLandmarks_GGO_C})
+ target_link_libraries(clitkMaskLandmarks clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskLandmarks)
+
+ WRAP_GGO(clitkJacobianImage_GGO_C clitkJacobianImage.ggo)
+ add_executable(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
+ target_link_libraries(clitkJacobianImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
+
+ WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
+ add_executable(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
+ target_link_libraries(clitkPadImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
+
+ WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
+ add_executable(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
+ target_link_libraries(clitkCatImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
+
+ WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
+ add_executable(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
+ clitkAnisotropicDiffusionGenericFilter.cxx
+ ${clitkAnisotropicDiffusion_GGO_C})
+ target_link_libraries(clitkAnisotropicDiffusion clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
+
+ WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
+ add_executable(clitkChangeImageInfo clitkChangeImageInfo.cxx
+ clitkChangeImageInfoGenericFilter.cxx
+ ${clitkChangeImageInfo_GGO_C})
+ target_link_libraries(clitkChangeImageInfo clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
+
+ WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
+ add_executable(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
+ target_link_libraries(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
+
+ WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
+ add_executable(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
+ target_link_libraries(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
+
+ WRAP_GGO(clitkNormalizeImageFilter_GGO_C clitkNormalizeImageFilter.ggo)
+ add_executable(clitkNormalizeImageFilter clitkNormalizeImageFilter.cxx ${clitkNormalizeImageFilter_GGO_C})
+ target_link_libraries(clitkNormalizeImageFilter clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNormalizeImageFilter)
+
+ WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
+ add_executable(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
+ target_link_libraries(clitkImageGradientMagnitude clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
+
+ WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
+ add_executable(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
+ target_link_libraries(clitkImageLaplacian clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
+
+ WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
+ add_executable(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
+ target_link_libraries(clitkImageIntensityWindowing clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
+
+ WRAP_GGO(clitkBlurImage_GGO_C clitkBlurImage.ggo)
+ add_executable(clitkBlurImage clitkBlurImage.cxx ${clitkBlurImage_GGO_C})
+ target_link_libraries(clitkBlurImage clitkCommon )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBlurImage)
+
+ #=========================================================
+ option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
+ if (CLITK_USE_ROOT)
+ find_package(ROOT REQUIRED)
+ if(ROOT_FOUND)
+ message(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
+ else(ROOT_FOUND)
+ message(FATAL_ERROR
+ "Cannot build without ROOT. Please set ROOTSYS environement variable.")
+ endif(ROOT_FOUND)
+ include_directories(${ROOT_INCLUDE_DIR})
+ link_directories(${ROOT_LIBRARY_DIR})
+ WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
+ add_executable(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
+ target_link_libraries(clitkMergeRootFiles ${ROOT_LIBRARIES})
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
+ endif()
+ #=========================================================
+
+
+ #=========================================================
+ if(CLITK_EXPERIMENTAL)
+ WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
+ add_executable(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
+ target_link_libraries(clitkBinaryImageToMesh clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
+
+ WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
+ add_executable(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
+ target_link_libraries(clitkMeshToBinaryImage clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
+
+ WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
+ add_executable(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
+ target_link_libraries(clitkMeshViewer clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
+ endif(CLITK_EXPERIMENTAL)
+ #=========================================================
+
+
+ #=========================================================
+ WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
+ add_executable(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
+ target_link_libraries(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
+
+ WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
+ add_executable(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
+ target_link_libraries(clitkDicomRTPlan2Gate clitkCommon)
+ set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
+ #=========================================================
+
+
+ install(TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
+
+endif(CLITK_BUILD_TOOLS)