Update GateSimulation2Dicom tool with test functions

[clitk.git] / tools / clitkAffineTransform.ggo

diff --git a/tools/clitkAffineTransform.ggo b/tools/clitkAffineTransform.ggo
index dc64bffbb9c1df25d36d2c43beb062825aef317b..bb74448cead8ee4624a9087bd5958ecdaa3e29d5 100644 (file)
--- a/tools/clitkAffineTransform.ggo
+++ b/tools/clitkAffineTransform.ggo
@@ -3,33 +3,33 @@ package "clitkAffineTransform"
 version "1.0"
 purpose "Resample with or without affine transform of 2D, 3D, 4D images or vector fields"
 
 version "1.0"
 purpose "Resample with or without affine transform of 2D, 3D, 4D images or vector fields"
 

-option "config"                -       "Config file"                     string        no
-option "verbose"       v       "Verbose"                         flag          off
+option "config"                - "Config file"                   string        no
+option "verbose"       v "Verbose"                       flag          off

 
 section "I/O"
 
 section "I/O"

-option "input"         i       "Input image filename"            string        yes
-option "output"        o       "Output image filename"           string        yes
-option "like"          l       "Resample output this image (size, spacing,origin)"     string  no
-option "transform_grid" -       "Apply affine transform to input grid for output's"     flag    off
+option "input"         i "Input image filename"                                          string yes
+option "output"        o "Output image filename"                                         string yes
+option "like"          l "Resample output this image (size, spacing, origin, direction)" string no
+option "transform_grid" - "Apply affine transform to input grid for output's"             flag   off

 
 section "Options"
 
 section "Options"

-option "size"          -       "New output size if different from input"       int     no      multiple
-option "spacing"       -       "New output spacing if different from input"    double  no      multiple
-option "spacinglike"   -       "New output spacing like this image"            string  no
-option "origin"                -       "New output origin if different from input"     double  no      multiple
-option "matrix"                m       "Affine matrix (homogene) filename"             string  no
-option "elastix"       e       "Read EulerTransform from elastix output file"  string  no
-option "rotate"                r       "Rotation to apply (radians)"                   double  no      multiple
-option "translate"     t       "Translation to apply (mm)"                     double  no      multiple
-option "pad"           -       "Edge padding value"                            double  no      default="0.0"
+option "size"          - "New output size if different from input"     int     no      multiple
+option "spacing"       - "New output spacing if different from input"  double  no      multiple
+option "spacinglike"   - "New output spacing like this image"          string  no
+option "origin"                - "New output origin if different from input"   double  no      multiple
+option "matrix"                m "Affine matrix (homogene) filename"           string  no
+option "elastix"       e "Read EulerTransform from elastix output file (combine if multiple)"  string  no
+option "rotate"                r "Rotation to apply (radians)"                 double  no      multiple
+option "translate"     t "Translation to apply (mm)"                   double  no      multiple
+option "pad"           - "Edge padding value"                          double  no      default="0.0"

 
 section "Interpolation"
 
 section "Interpolation"

-option "interp"                -       "Interpolation: 0=NN, 1=Linear, 2=BSpline, 3=BLUT"      int     no  default="1"
-option "interpOrder"   -       "Order if BLUT or BSpline (0-5)"                        int     no  default="3"
-option "interpSF"      -       "Sampling factor if BLUT"                               int     no  default="20"
-option "interpVF"      -       "Interpolation: 0=NN, 1=Linear, 2=BSpline, 3=BLUT"      int     no  default="1"
-option "interpVFOrder" -       "Order if BLUT or BSpline (0-5)"                        int     no  default="3"
-option "interpVFSF"    -       "Sampling factor if BLUT"                               int     no  default="20"
+option "interp"                - "Interpolation: 0=NN, 1=Linear, 2=BSpline, 3=BLUT"    int     no  default="1"
+option "interpOrder"   - "Order if BLUT or BSpline (0-5)"                      int     no  default="3"
+option "interpSF"      - "Sampling factor if BLUT"                             int     no  default="20"
+option "interpVF"      - "Interpolation: 0=NN, 1=Linear, 2=BSpline, 3=BLUT"    int     no  default="1"
+option "interpVFOrder" - "Order if BLUT or BSpline (0-5)"                      int     no  default="3"
+option "interpVFSF"    - "Sampling factor if BLUT"                             int     no  default="20"