-#include <iostream>
-#include "gdcm.h"
+/*=========================================================================
+
+ Program: gdcm
+ Module: $RCSfile: PrintDicomDir.cxx,v $
+ Language: C++
+ Date: $Date: 2007/05/23 14:18:04 $
+ Version: $Revision: 1.36 $
+
+ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
+ l'Image). All rights reserved. See Doc/License.txt or
+ http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details.
+
+ This software is distributed WITHOUT ANY WARRANTY; without even
+ the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE. See the above copyright notices for more information.
+
+=========================================================================*/
#include "gdcmDocument.h"
#include "gdcmDicomDir.h"
-#include "gdcmValEntry.h"
+#include "gdcmDicomDirPatient.h"
+#include "gdcmDicomDirStudy.h"
+#include "gdcmDicomDirVisit.h"
+#include "gdcmDicomDirSerie.h"
+#include "gdcmDicomDirImage.h"
+#include "gdcmDicomDirPrivate.h"
+#include "gdcmTS.h"
+#include "gdcmDebug.h"
-#include <fstream>
+#include "gdcmArgMgr.h"
-using namespace std;
+#include <fstream>
+#include <iostream>
int main(int argc, char* argv[])
-{
- gdcmDicomDir *e1;
-
- ListDicomDirPatient::iterator itPatient;
- ListDicomDirStudy::iterator itStudy;
- ListDicomDirSerie::iterator itSerie;
- ListDicomDirImage::iterator itImage;
- TSKey v;
-
- std::string file;
- if (argc > 1)
- file = argv[1];
- else {
- file += GDCM_DATA_ROOT;
- file += "/DICOMDIR";
+{
+ START_USAGE(usage)
+ " \n PrintDicomDir :\n ",
+ " Display the tree-like structure of a DICOMDIR File ",
+ " usage: PrintDicomDir filein=fileName [level=n][detail=m][debug] ",
+ " detail = 1 : Patients, 2 : Studies, 3 : Series, 4 : Images ",
+ " 5 : Full Content ",
+ " level = 0,1,2 : depending on user (what he wants to see) ",
+ " warning : user wants to run the program in 'warning mode' ",
+ " debug : developper wants to run the program in 'debug mode' ",
+ FINISH_USAGE
+
+ // Initialize Arguments Manager
+ GDCM_NAME_SPACE::ArgMgr *am= new GDCM_NAME_SPACE::ArgMgr(argc, argv);
+
+ if (argc == 1 || am->ArgMgrDefined("usage") )
+ {
+ am->ArgMgrUsage(usage); // Display 'usage'
+ delete am;
+ return 0;
}
+
+ GDCM_NAME_SPACE::DicomDir *f;
+ GDCM_NAME_SPACE::TSKey v;
+
+ GDCM_NAME_SPACE::DicomDirPatient *pa;
+ GDCM_NAME_SPACE::DicomDirStudy *st;
+ GDCM_NAME_SPACE::DicomDirSerie *se;
+ GDCM_NAME_SPACE::DicomDirVisit *vs;
+ GDCM_NAME_SPACE::DicomDirImage *im;
+ GDCM_NAME_SPACE::DicomDirPrivate *pr;
+ char *fileName;
+ fileName = am->ArgMgrWantString("filein",usage);
+
+ int level = am->ArgMgrGetInt("level", 2);
+
+ int detailLevel = am->ArgMgrGetInt("detail", 2);
+
+ if (am->ArgMgrDefined("debug"))
+ GDCM_NAME_SPACE::Debug::DebugOn();
+
+ if (am->ArgMgrDefined("warning"))
+ GDCM_NAME_SPACE::Debug::WarningOn();
+
+ /* if unused Param we give up */
+ if ( am->ArgMgrPrintUnusedLabels() )
+ {
+ am->ArgMgrUsage(usage);
+ delete am;
+ return 0;
+ }
+
+ // new gdcm2 style
- e1 = new gdcmDicomDir( file );
+ f = GDCM_NAME_SPACE::DicomDir::New();
+ f->SetFileName ( fileName );
+ f->Load( );
- if (argc > 2) {
- int level = atoi(argv[2]);
- e1->SetPrintLevel(level);
+ // Test if the DicomDir is readable
+ if( !f->IsReadable() )
+ {
+ std::cout<<" DicomDir '"<<fileName
+ <<"' is not readable"<<std::endl
+ <<" ...Failed"<<std::endl;
+
+ f->Delete();
+ return 1;
}
- if(e1->GetDicomDirPatients().begin() == e1->GetDicomDirPatients().end() )
+ f->SetPrintLevel(level);
+
+ // Test if the DicomDir contains any Patient
+ pa = f->GetFirstPatient();
+ if ( pa == 0)
{
- std::cout<<"Empty list"<<std::endl;
- return(1);
+ std::cout<<" DicomDir '"<<fileName
+ <<" has no patient"<<std::endl
+ <<" ...Failed"<<std::endl;
+
+ f->Delete();
+ return 1;
}
// Structure use Examples
-// DON'T REMOVE neither the following code, nor the commented out lines
-/*
- cout << std::endl << std::endl
- << " = PATIENT List =========================================="
- << std::endl<< std::endl;
+ switch (detailLevel)
+ {
+ case 1:
+ std::cout << std::endl << std::endl
+ << " = PATIENT List =========================================="
+ << std::endl<< std::endl;
- itPatient = e1->GetDicomDirPatients().begin();
- while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT
- std::cout << (*itPatient)->GetEntryByNumber(0x0010, 0x0010) << std::endl; // Patient's Name
- itPatient ++;
- }
-*/
+ pa = f->GetFirstPatient();
+ while (pa)
+ {
+ std::cout << "Pat.Name:[" << pa->GetEntryString(0x0010, 0x0010) <<"]"; // Patient's Name
+ std::cout << " Pat.ID:[";
+ std::cout << pa->GetEntryString(0x0010, 0x0020) << "]" << std::endl; // Patient ID
+ pa = f->GetNextPatient();
+ }
+ break;
-/*
- cout << std::endl << std::endl
- << " = PATIENT/STUDY List ======================================="
- << std::endl<< std::endl;
+ case 2:
+ std::cout << std::endl << std::endl
+ << " = PATIENT/STUDY List ======================================="
+ << std::endl<< std::endl;
- itPatient = e1->GetDicomDirPatients().begin();
- while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT
- std::cout << (*itPatient)->GetEntryByNumber(0x0010, 0x0010) << std::endl; // Patient's Name
- itStudy = ((*itPatient)->GetDicomDirStudies()).begin();
- while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient
- std::cout << "--- "<< (*itStudy)->GetEntryByNumber(0x0008, 0x1030) << std::endl; // Study Description
- ++itStudy;
- }
- itPatient ++;
- }
+ pa = f->GetFirstPatient();
+ while ( pa ) // on degouline les PATIENT de ce DICOMDIR
+ {
+ std::cout << "Pat.Name:[" << pa->GetEntryString(0x0010, 0x0010) <<"]"; // Patient's Name
+ std::cout << " Pat.ID:[";
+ std::cout << pa->GetEntryString(0x0010, 0x0020) << "]" << std::endl; // Patient ID
+ st = pa->GetFirstStudy();
+ while ( st )
+ { // on degouline les STUDY de ce patient
+ std::cout << "--- Stud.descr:[" << st->GetEntryString(0x0008, 0x1030) << "]"; // Study Description
+ std::cout << " Stud.ID:[" << st->GetEntryString(0x0020, 0x0010) << "]"; // Study ID
+ std::cout << " Stud.Inst.UID:[" << st->GetEntryString(0x0020, 0x000d) << "]"; // Study Instance UID
+ std::cout << std::endl;
+ st = pa->GetNextStudy();
+ }
+ pa = f->GetNextPatient();
+ }
+ break;
-*/
+ case 3:
+ std::cout << std::endl << std::endl
+ << " = PATIENT/STUDY/SERIE List =================================="
+ << std::endl<< std::endl;
+ pa = f->GetFirstPatient();
+ while ( pa ) // on degouline les PATIENT de ce DICOMDIR
+ {
+ // Patient's Name, Patient ID
+ std::cout << "Pat.Name:[" << pa->GetEntryString(0x0010, 0x0010) <<"]"; // Patient's Name
+ std::cout << " Pat.ID:[";
+ std::cout << pa->GetEntryString(0x0010, 0x0020) << "]" << std::endl; // Patient ID
+
+ st = pa->GetFirstStudy();
+ while ( st )
+ { // on degouline les STUDY de ce patient
+ std::cout << "--- Stud.descr:[" << st->GetEntryString(0x0008, 0x1030) << "]"; // Study Description
+ std::cout << " Stud.ID:[" << st->GetEntryString(0x0020, 0x0010) << "]"; // Study ID
+ std::cout << " Stud.Inst.UID:[" << st->GetEntryString(0x0020, 0x000d) << "]"; // Study Instance UID
+ std::cout << std::endl;
+
+ se = st->GetFirstSerie();
+ while ( se )
+ { // on degouline les SERIES de cette study
+ std::cout << "--- --- Ser.Descr:["<< se->GetEntryString(0x0008, 0x103e)<< "]"; // Series Description
+ std::cout << " Ser.nb:[" << se->GetEntryString(0x0020, 0x0011); // Series number
+ std::cout << "] Mod.:[" << se->GetEntryString(0x0008, 0x0060) << "]"; // Modality
+ std::cout << " Serie Inst.UID.:[" << se->GetEntryString(0x0020, 0x000e) << "]"; // Series Instance UID
+ std::cout << std::endl;
+ se = st->GetNextSerie();
+ }
+
+ vs = st->GetFirstVisit();
+ while ( vs )
+ { // on degouline les VISIT de cette study
+ std::cout << "--- --- VISIT: ";
+ std::cout << " Ref. File ID :[" << vs->GetEntryString(0x0004, 0x1500) << "]"; // Referenced File ID
+ std::cout << " Inst.Name:[" << vs->GetEntryString(0x0008,0x0080) << "]"; // Institution Name
+ std::cout << " Adm.ID:[" << vs->GetEntryString(0x0038, 0x0010) << "]"; // Admission ID
+ std::cout << " Adm. date:[" << vs->GetEntryString(0x0038, 0x0020) << "]"; // Admitting Date
+ std::cout << std::endl;
+ vs = st->GetNextVisit();
+ }
+
+ st = pa->GetNextStudy();
+ }
+ pa = f->GetNextPatient();
+ }
+ break;
+
+ case 4:
+ std::cout << std::endl << std::endl
+ << " = PATIENT/STUDY/SERIE/IMAGE List ============================"
+ << std::endl<< std::endl;
+
+ pa = f->GetFirstPatient();
+ while ( pa )
+ { // les PATIENT de ce DICOMDIR
+ // Patient's Name, Patient ID
+ std::cout << "Pat.Name:[" << pa->GetEntryString(0x0010, 0x0010) <<"]"; // Patient's Name
+ std::cout << " Pat.ID:[";
+ std::cout << pa->GetEntryString(0x0010, 0x0020) << "]" << std::endl; // Patient ID
+
+ st = pa->GetFirstStudy();
+ while ( st )
+ { // on degouline les STUDY de ce patient
+ std::cout << "--- Stud.descr:[" << st->GetEntryString(0x0008, 0x1030) << "]"; // Study Description
+ std::cout << " Stud.ID:[" << st->GetEntryString(0x0020, 0x0010) << "]"; // Study ID
+ std::cout << " Stud.Inst.UID:[" << st->GetEntryString(0x0020, 0x000d) << "]"; // Study Instance UID
+ std::cout << std::endl;
+
+ vs = st->GetFirstVisit();
+ while ( vs )
+ { // on degouline les VISIT de cette study
+ std::cout << "--- --- VISIT: ";
+ std::cout << " Ref. File ID :[" << vs->GetEntryString(0x0004, 0x1500) << "]"; // Referenced File ID
+ std::cout << " Inst.Name:[" << vs->GetEntryString(0x0008,0x0080) << "]"; // Institution Name
+ std::cout << " Adm.ID:[" << vs->GetEntryString(0x0038, 0x0010) << "]"; // Admission ID
+ std::cout << " Adm. date:[" << vs->GetEntryString(0x0038, 0x0020) << "]"; // Admitting Date
+ std::cout << std::endl;
+ vs = st->GetNextVisit();
+ }
+
+ se = st->GetFirstSerie();
+ while ( se )
+ { // on degouline les SERIES de cette study
+ std::cout << "--- --- Ser.Descr:["<< se->GetEntryString(0x0008, 0x103e) << "]"; // Series Description
+ std::cout << " Ser.nb:[" << se->GetEntryString(0x0020, 0x0011) << "]"; // Series number
+ std::cout << " Mod.:[" << se->GetEntryString(0x0008, 0x0060) << "]"; // Modality
+ std::cout << " Serie Inst.UID.:[" << se->GetEntryString(0x0020, 0x000e) << "]"; // Series Instance UID
+ std::cout << std::endl;
+
+ im = se->GetFirstImage();
+ while ( im )
+ { // on degouline les Images de cette serie
+ std::cout << "--- --- --- "<< " IMAGE Ref. File ID :[" << im->GetEntryString(0x0004, 0x1500)
+ << "]" << std::endl; // File name (Referenced File ID)
+ im = se->GetNextImage();
+ }
- cout << std::endl << std::endl
- << " = PATIENT/STUDY/SERIE List =================================="
- << std::endl<< std::endl;
+ pr = se->GetFirstPrivate();
+ while ( pr )
+ { // on degouline les 'Privates' de cette serie
+ std::cout << "--- --- --- "<< " PRIVATE Ref. File ID :[" << pr->GetEntryString(0x0004, 0x1500)
+ << "]" << std::endl; // File name (Referenced File ID)
+ pr = se->GetNextPrivate();
+ }
- itPatient = e1->GetDicomDirPatients().begin();
- while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT
- // Patient's Name, Patient ID
- std::cout << "Pat.Name:[" << (*itPatient)->GetEntryByNumber(0x0010, 0x0010) <<"]"; // Patient's Name
- std::cout << " Pat.ID:[";
- std::cout << (*itPatient)->GetEntryByNumber(0x0010, 0x0020) << "]" << std::endl; // Patient ID
- itStudy = ((*itPatient)->GetDicomDirStudies()).begin();
- while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient
- std::cout << "--- Stud.descr:[" << (*itStudy)->GetEntryByNumber(0x0008, 0x1030) << "]";// Study Description
- std::cout << " Stud.ID:[" << (*itStudy)->GetEntryByNumber(0x0020, 0x0010); // Study ID
- std::cout << "]" << std::endl;
- itSerie = ((*itStudy)->GetDicomDirSeries()).begin();
- while (itSerie != (*itStudy)->GetDicomDirSeries().end() ) { // on degouline les SERIES de cette study
- std::cout << "--- --- Ser.Descr:["<< (*itSerie)->GetEntryByNumber(0x0008, 0x103e)<< "]"; // Series Description
- std::cout << " Ser.nb:[" << (*itSerie)->GetEntryByNumber(0x0020, 0x0011); // Series number
- std::cout << "] Mod.:[" << (*itSerie)->GetEntryByNumber(0x0008, 0x0060) << "]"; // Modality
- std::cout << std::endl;
- ++itSerie;
+ se = st->GetNextSerie();
+ }
+ st = pa->GetNextStudy();
+ }
+ pa = f->GetNextPatient();
}
- ++itStudy;
- }
- itPatient ++;
- }
-
-
+ break;
+
+ case 5:
+ std::cout << std::endl << std::endl
+ << " = DICOMDIR full content =========================================="
+ << std::endl<< std::endl;
+ f->Print();
+ break;
+
+ } // end switch
+
+
/*
- cout << std::endl << std::endl
- << " = PATIENT/STUDY/SERIE/IMAGE List ============================"
+ // Previous code.
+ // Kept as an example. Please don't remove
+
+ GDCM_NAME_SPACE::ListDicomDirPatient::const_iterator itPatient;
+ GDCM_NAME_SPACE::ListDicomDirStudy::const_iterator itStudy;
+ GDCM_NAME_SPACE::ListDicomDirSerie::const_iterator itSerie;
+ GDCM_NAME_SPACE::ListDicomDirImage::const_iterator itImage;
+ cout << std::endl << std::endl
+ << " = Liste des PATIENT/STUDY/SERIE/IMAGE ==================================="
<< std::endl<< std::endl;
- itPatient = e1->GetDicomDirPatients().begin();
- while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT
- std::cout << (*itPatient)->GetEntryByNumber(0x0010, 0x0010) << std::endl; // Patient's Name
+ itPatient = f->GetDicomDirPatients().begin();
+ while ( itPatient != f->GetDicomDirPatients().end() ) { // on degouline les PATIENT de ce DICOMDIR
+ std::cout << (*itPatient)->GetEntryString(0x0010, 0x0010) << std::endl; // Patient's Name
itStudy = ((*itPatient)->GetDicomDirStudies()).begin();
while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient
- std::cout << "--- "<< (*itStudy)->GetEntryByNumber(0x0008, 0x1030) << std::endl; // Study Description
+ std::cout << "--- "<< (*itStudy)->GetEntryString(0x0008, 0x1030) << std::endl; // Study Description
itSerie = ((*itStudy)->GetDicomDirSeries()).begin();
while (itSerie != (*itStudy)->GetDicomDirSeries().end() ) { // on degouline les SERIES de cette study
- std::cout << "--- --- "<< (*itSerie)->GetEntryByNumber(0x0008, 0x103e) << std::endl; // Serie Description
+ std::cout << "--- --- "<< (*itSerie)->GetEntryString(0x0008, 0x103e) << std::endl; // Serie Description
itImage = ((*itSerie)->GetDicomDirImages()).begin();
- while (itImage != (*itSerie)->GetDicomDirImages().end() ) { // on degouline les SERIES de cette study
- std::cout << "--- --- --- "<< (*itImage)->GetEntryByNumber(0x0004, 0x1500) << std::endl; // File name
+ while (itImage != (*itSerie)->GetDicomDirImages().end() ) { // on degouline les IMAGES de cette serie
+ std::cout << "--- --- --- "<< (*itImage)->GetEntryString(0x0004, 0x1500) << std::endl; // File name
++itImage;
}
++itSerie;
}
*/
-/*
- cout << std::endl << std::endl
- << " = DICOMDIR full content =========================================="
- << std::endl<< std::endl;
- e1->Print();
-*/
+
+ if(f->IsReadable())
+ std::cout <<std::endl<<fileName<<" is Readable"<<std::endl;
+ else
+ std::cout <<std::endl<<fileName<<" is NOT Readable"<<std::endl;
std::cout<<std::flush;
- delete e1;
+ f->Delete();
return(0);
}
git://git.creatis.insa-lyon.fr / gdcm.git / blobdiff