Program: gdcm
Module: $RCSfile: PrintDicomDir.cxx,v $
Language: C++
- Date: $Date: 2005/01/13 14:56:39 $
- Version: $Revision: 1.13 $
+ Date: $Date: 2005/07/21 04:55:50 $
+ Version: $Revision: 1.28 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
#include "gdcmValEntry.h"
#include "gdcmDicomDirPatient.h"
#include "gdcmDicomDirStudy.h"
+#include "gdcmDicomDirVisit.h"
#include "gdcmDicomDirSerie.h"
#include "gdcmDicomDirImage.h"
#include "gdcmTS.h"
#include "gdcmDebug.h"
+#include "gdcmArgMgr.h"
+
#include <fstream>
#include <iostream>
int main(int argc, char* argv[])
-{
- gdcm::DicomDir *e1;
-
- gdcm::ListDicomDirPatient::const_iterator itPatient;
- gdcm::ListDicomDirStudy::const_iterator itStudy;
- gdcm::ListDicomDirSerie::const_iterator itSerie;
- gdcm::ListDicomDirImage::const_iterator itImage;
- gdcm::TSKey v;
-
- std::string fileName;
- if (argc > 1)
- fileName = argv[1];
- else
+{
+ START_USAGE(usage)
+ " \n PrintDicomDir :\n",
+ " Display the tree-like structure of a DICOMDIR File",
+ " usage: PrintDicomDir filein=fileName [level=n] [debug] ",
+ " detail = 1 : Patients, 2 : Studies, 3 : Series, 4 : Images ",
+ " 5 : Full Content ",
+ " level = 0,1,2 : depending on user (what he wants to see)",
+ " debug : user wants to run the program in 'debug mode' ",
+ FINISH_USAGE
+
+ // Initialize Arguments Manager
+ gdcm::ArgMgr *am= new gdcm::ArgMgr(argc, argv);
+
+ if (argc == 1 || am->ArgMgrDefined("usage") )
{
- fileName = GDCM_DATA_ROOT;
- fileName += "/DICOMDIR";
+ am->ArgMgrUsage(usage); // Display 'usage'
+ delete am;
+ return 0;
}
+
+ gdcm::DicomDir *f;
+ gdcm::TSKey v;
- if (argc > 3)
- gdcm::Debug::SetDebugOn();
+ gdcm::DicomDirPatient *pa;
+ gdcm::DicomDirStudy *st;
+ gdcm::DicomDirSerie *se;
+ gdcm::DicomDirVisit *vs;
+ gdcm::DicomDirImage *im;
+
+ char *fileName;
+ fileName = am->ArgMgrWantString("filein",usage);
- e1 = new gdcm::DicomDir( fileName );
+ int level = am->ArgMgrGetInt("level", 2);
- e1->SetPrintLevel(2);
- int detailLevel;
- if (argc > 2)
- detailLevel = atoi(argv[2]);
- else
- detailLevel = 3;
+ int detailLevel = am->ArgMgrGetInt("detail", 2);
+
+ if (am->ArgMgrDefined("debug"))
+ gdcm::Debug::DebugOn();
- if( !e1->IsReadable() )
+ /* if unused Param we give up */
+ if ( am->ArgMgrPrintUnusedLabels() )
+ {
+ am->ArgMgrUsage(usage);
+ delete am;
+ return 0;
+ }
+
+ // new gdcm2 style
+
+ f = new gdcm::DicomDir();
+ f->SetFileName ( fileName );
+ f->Load( );
+
+ // Test if the DicomDir is readable
+ if( !f->IsReadable() )
{
std::cout<<" DicomDir '"<<fileName
<<"' is not readable"<<std::endl
<<" ...Failed"<<std::endl;
- delete e1;
+ delete f;
return 1;
}
- if(e1->GetDicomDirPatients().begin() == e1->GetDicomDirPatients().end() )
+ f->SetPrintLevel(level);
+
+ // Test if the DicomDir contains any Patient
+ pa = f->GetFirstPatient();
+ if ( pa == 0)
{
std::cout<<" DicomDir '"<<fileName
- <<" has no patients"<<std::endl
+ <<" has no patient"<<std::endl
<<" ...Failed"<<std::endl;
- delete e1;
+ delete f;
return 1;
}
<< " = PATIENT List =========================================="
<< std::endl<< std::endl;
- itPatient = e1->GetDicomDirPatients().begin();
- while ( itPatient != e1->GetDicomDirPatients().end() ) // on degouline la liste de PATIENT
+ pa = f->GetFirstPatient();
+ while (pa)
{
- std::cout << (*itPatient)->GetEntry(0x0010, 0x0010) << std::endl; // Patient's Name
- itPatient ++;
+ std::cout << "Pat.Name:[" << pa->GetEntryValue(0x0010, 0x0010) <<"]"; // Patient's Name
+ std::cout << " Pat.ID:[";
+ std::cout << pa->GetEntryValue(0x0010, 0x0020) << "]" << std::endl; // Patient ID
+ pa = f->GetNextPatient();
}
break;
<< " = PATIENT/STUDY List ======================================="
<< std::endl<< std::endl;
- itPatient = e1->GetDicomDirPatients().begin();
- while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT
- std::cout << (*itPatient)->GetEntry(0x0010, 0x0010) << std::endl; // Patient's Name
- itStudy = ((*itPatient)->GetDicomDirStudies()).begin();
- while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient
- std::cout << "--- "<< (*itStudy)->GetEntry(0x0008, 0x1030) << std::endl; // Study Description
- ++itStudy;
+ pa = f->GetFirstPatient();
+ while ( pa ) // on degouline les PATIENT de ce DICOMDIR
+ {
+ std::cout << "Pat.Name:[" << pa->GetEntryValue(0x0010, 0x0010) <<"]"; // Patient's Name
+ std::cout << " Pat.ID:[";
+ std::cout << pa->GetEntryValue(0x0010, 0x0020) << "]" << std::endl; // Patient ID
+ st = pa->GetFirstStudy();
+ while ( st ) { // on degouline les STUDY de ce patient
+ std::cout << "--- Stud.descr:[" << st->GetEntryValue(0x0008, 0x1030) << "]"; // Study Description
+ std::cout << " Stud.ID:[" << st->GetEntryValue(0x0020, 0x0010) << "]"; // Study ID
+ std::cout << std::endl;
+ st = pa->GetNextStudy();
}
- itPatient ++;
+ pa = f->GetNextPatient();
}
break;
std::cout << std::endl << std::endl
<< " = PATIENT/STUDY/SERIE List =================================="
<< std::endl<< std::endl;
-
- itPatient = e1->GetDicomDirPatients().begin();
- while ( itPatient != e1->GetDicomDirPatients().end() ) // on degouline la liste de PATIENT
+
+ pa = f->GetFirstPatient();
+ while ( pa ) // on degouline les PATIENT de ce DICOMDIR
{
// Patient's Name, Patient ID
- std::cout << "Pat.Name:[" << (*itPatient)->GetEntry(0x0010, 0x0010) <<"]"; // Patient's Name
+ std::cout << "Pat.Name:[" << pa->GetEntryValue(0x0010, 0x0010) <<"]"; // Patient's Name
std::cout << " Pat.ID:[";
- std::cout << (*itPatient)->GetEntry(0x0010, 0x0020) << "]" << std::endl; // Patient ID
- itStudy = ((*itPatient)->GetDicomDirStudies()).begin();
- while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient
- std::cout << "--- Stud.descr:[" << (*itStudy)->GetEntry(0x0008, 0x1030) << "]";// Study Description
- std::cout << " Stud.ID:[" << (*itStudy)->GetEntry(0x0020, 0x0010); // Study ID
- std::cout << "]" << std::endl;
- itSerie = ((*itStudy)->GetDicomDirSeries()).begin();
- while (itSerie != (*itStudy)->GetDicomDirSeries().end() ) { // on degouline les SERIES de cette study
- std::cout << "--- --- Ser.Descr:["<< (*itSerie)->GetEntry(0x0008, 0x103e)<< "]"; // Series Description
- std::cout << " Ser.nb:[" << (*itSerie)->GetEntry(0x0020, 0x0011); // Series number
- std::cout << "] Mod.:[" << (*itSerie)->GetEntry(0x0008, 0x0060) << "]"; // Modality
- std::cout << std::endl;
- ++itSerie;
+ std::cout << pa->GetEntryValue(0x0010, 0x0020) << "]" << std::endl; // Patient ID
+
+ st = pa->GetFirstStudy();
+ while ( st ) { // on degouline les STUDY de ce patient
+ std::cout << "--- Stud.descr:[" << st->GetEntryValue(0x0008, 0x1030) << "]"; // Study Description
+ std::cout << " Stud.ID:[" << st->GetEntryValue(0x0020, 0x0010) << "]"; // Study ID
+ std::cout << std::endl;
+
+ se = st->GetFirstSerie();
+ while ( se ) { // on degouline les SERIES de cette study
+ std::cout << "--- --- Ser.Descr:["<< se->GetEntryValue(0x0008, 0x103e)<< "]"; // Series Description
+ std::cout << " Ser.nb:[" << se->GetEntryValue(0x0020, 0x0011); // Series number
+ std::cout << "] Mod.:[" << se->GetEntryValue(0x0008, 0x0060) << "]"; // Modality
+ std::cout << std::endl;
+ se = st->GetNextSerie();
+ }
+
+ vs = st->GetFirstVisit();
+ while ( vs ) { // on degouline les VISIT de cette study
+ std::cout << "--- --- VISIT: ";
+ std::cout << " Ref. File ID :[" << vs->GetEntryValue(0x0004, 0x1500) << "]"; // Referenced File ID
+ std::cout << " Inst.Name:[" << vs->GetEntryValue(0x0008,0x0080) << "]"; // Institution Name
+ std::cout << " Adm.ID:[" << vs->GetEntryValue(0x0038, 0x0010) << "]"; // Admission ID
+ std::cout << " Adm. date:[" << vs->GetEntryValue(0x0038, 0x0020) << "]"; // Admitting Date
+ std::cout << std::endl;
+ vs = st->GetNextVisit();
}
- ++itStudy;
+
+ st = pa->GetNextStudy();
}
- itPatient ++;
+ pa = f->GetNextPatient();
}
break;
<< " = PATIENT/STUDY/SERIE/IMAGE List ============================"
<< std::endl<< std::endl;
- itPatient = e1->GetDicomDirPatients().begin();
- while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT
- std::cout << (*itPatient)->GetEntry(0x0010, 0x0010) << std::endl; // Patient's Name
- itStudy = ((*itPatient)->GetDicomDirStudies()).begin();
- while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient
- std::cout << "--- "<< (*itStudy)->GetEntry(0x0008, 0x1030) << std::endl; // Study Description
- itSerie = ((*itStudy)->GetDicomDirSeries()).begin();
- while (itSerie != (*itStudy)->GetDicomDirSeries().end() ) { // on degouline les SERIES de cette study
- std::cout << "--- --- "<< (*itSerie)->GetEntry(0x0008, 0x103e) << std::endl; // Serie Description
- itImage = ((*itSerie)->GetDicomDirImages()).begin();
- while (itImage != (*itSerie)->GetDicomDirImages().end() ) { // on degouline les SERIES de cette study
- std::cout << "--- --- --- "<< (*itImage)->GetEntry(0x0004, 0x1500) << std::endl; // File name
- ++itImage;
+ pa = f->GetFirstPatient();
+ while ( pa ) { // les PATIENT de ce DICOMDIR
+ // Patient's Name, Patient ID
+ std::cout << "Pat.Name:[" << pa->GetEntryValue(0x0010, 0x0010) <<"]"; // Patient's Name
+ std::cout << " Pat.ID:[";
+ std::cout << pa->GetEntryValue(0x0010, 0x0020) << "]" << std::endl; // Patient ID
+
+ st = pa->GetFirstStudy();
+ while ( st ) { // on degouline les STUDY de ce patient
+ std::cout << "--- Stud.descr:[" << st->GetEntryValue(0x0008, 0x1030) << "]"; // Study Description
+ std::cout << " Stud.ID:[" << st->GetEntryValue(0x0020, 0x0010) << "]"; // Study ID
+ std::cout << std::endl;
+
+ vs = st->GetFirstVisit();
+ while ( vs ) { // on degouline les VISIT de cette study
+ std::cout << "--- --- VISIT: ";
+ std::cout << " Ref. File ID :[" << vs->GetEntryValue(0x0004, 0x1500) << "]"; // Referenced File ID
+ std::cout << " Inst.Name:[" << vs->GetEntryValue(0x0008,0x0080) << "]"; // Institution Name
+ std::cout << " Adm.ID:[" << vs->GetEntryValue(0x0038, 0x0010) << "]"; // Admission ID
+ std::cout << " Adm. date:[" << vs->GetEntryValue(0x0038, 0x0020) << "]"; // Admitting Date
+ std::cout << std::endl;
+ vs = st->GetNextVisit();
+ }
+
+ se = st->GetFirstSerie();
+ while ( se ) { // on degouline les SERIES de cette study
+ std::cout << "--- --- Ser.Descr:["<< se->GetEntryValue(0x0008, 0x103e)<< "]"; // Series Description
+ std::cout << " Ser.nb:[" << se->GetEntryValue(0x0020, 0x0011); // Series number
+ std::cout << "] Mod.:[" << se->GetEntryValue(0x0008, 0x0060) << "]"; // Modality
+ std::cout << std::endl;
+
+ im = se->GetFirstImage();
+ while ( im ) { // on degouline les Images de cette serie
+ std::cout << "--- --- --- "<< " IMAGE Ref. File ID :[" << im->GetEntryValue(0x0004, 0x1500)
+ << "]" << std::endl; // File name (Referenced File ID)
+ im = se->GetNextImage();
}
- ++itSerie;
+ se = st->GetNextSerie();
}
- ++itStudy;
- }
- itPatient ++;
+ st = pa->GetNextStudy();
+ }
+ pa = f->GetNextPatient();
}
break;
std::cout << std::endl << std::endl
<< " = DICOMDIR full content =========================================="
<< std::endl<< std::endl;
- e1->Print();
+ f->Print();
break;
} // end switch
+ /*
+ // Previous code.
+ // Kept as an example. Please don't remove
+
+ gdcm::ListDicomDirPatient::const_iterator itPatient;
+ gdcm::ListDicomDirStudy::const_iterator itStudy;
+ gdcm::ListDicomDirSerie::const_iterator itSerie;
+ gdcm::ListDicomDirImage::const_iterator itImage;
+ cout << std::endl << std::endl
+ << " = Liste des PATIENT/STUDY/SERIE/IMAGE ==================================="
+ << std::endl<< std::endl;
+
+ itPatient = f->GetDicomDirPatients().begin();
+ while ( itPatient != f->GetDicomDirPatients().end() ) { // on degouline les PATIENT de ce DICOMDIR
+ std::cout << (*itPatient)->GetEntryValue(0x0010, 0x0010) << std::endl; // Patient's Name
+ itStudy = ((*itPatient)->GetDicomDirStudies()).begin();
+ while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient
+ std::cout << "--- "<< (*itStudy)->GetEntryValue(0x0008, 0x1030) << std::endl; // Study Description
+ itSerie = ((*itStudy)->GetDicomDirSeries()).begin();
+ while (itSerie != (*itStudy)->GetDicomDirSeries().end() ) { // on degouline les SERIES de cette study
+ std::cout << "--- --- "<< (*itSerie)->GetEntryValue(0x0008, 0x103e) << std::endl; // Serie Description
+ itImage = ((*itSerie)->GetDicomDirImages()).begin();
+ while (itImage != (*itSerie)->GetDicomDirImages().end() ) { // on degouline les IMAGES de cette serie
+ std::cout << "--- --- --- "<< (*itImage)->GetEntryValue(0x0004, 0x1500) << std::endl; // File name
+ ++itImage;
+ }
+ ++itSerie;
+ }
+ ++itStudy;
+ }
+ itPatient ++;
+ }
+ */
+
- if(e1->IsReadable())
+ if(f->IsReadable())
std::cout <<std::endl<<fileName<<" is Readable"<<std::endl;
else
std::cout <<std::endl<<fileName<<" is NOT Readable"<<std::endl;
std::cout<<std::flush;
- delete e1;
+ delete f;
return(0);
}
git://git.creatis.insa-lyon.fr / gdcm.git / blobdiff