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[FrontAlgorithms.git] / appli / CTBronchi / Functions.h

diff --git a/appli/CTBronchi/Functions.h b/appli/CTBronchi/Functions.h
index 7f20083f1017baab844ae97bd103f47a296a4e0e..2e9732ce326106ba55b4c15ca1a9bb8807e5ebbf 100644 (file)
--- a/appli/CTBronchi/Functions.h
+++ b/appli/CTBronchi/Functions.h
@@ -6,8 +6,6 @@
 #define __CTBronchi__Functions__h__
 
 #include <chrono>
-#include <map>
-#include <sstream>
 #include <itkImageFileReader.h>
 #include <itkImageFileWriter.h>
 
@@ -34,97 +32,21 @@ namespace CTBronchi
     typename _TReader::Pointer reader = _TReader::New( );
     reader->SetFileName( fname );
     double t = MeasureTime( reader );
-    std::cout << "Read " << fname << " in " << t << " s" << std::endl;
+    std::cout << "Read \"" << fname << "\" in " << t << " s" << std::endl;
     image = reader->GetOutput( );
     image->DisconnectPipeline( );
   }
 
   // -----------------------------------------------------------------------
-  template< class _TImagePtr >
-  void WriteImage( const _TImagePtr& image, const std::string& fname )
+  template< class _TImage >
+  void WriteImage( const _TImage* image, const std::string& fname )
   {
-    typedef typename _TImagePtr::ObjectType _TImage;
     typedef itk::ImageFileWriter< _TImage > _TWriter;
     typename _TWriter::Pointer writer = _TWriter::New( );
     writer->SetFileName( fname );
     writer->SetInput( image );
     double t = MeasureTime( writer );
-    std::cout << "Wrote " << fname << " in " << t << " s" << std::endl;
-  }
-
-  // -----------------------------------------------------------------------
-  bool ParseArgs(
-    std::map< std::string, std::string >& args, int argc, char* argv[]
-    )
-  {
-    std::set< std::string > mandatory;
-    mandatory.insert( "in" );
-    mandatory.insert( "out" );
-    mandatory.insert( "seed" );
-
-    args[ "mori_minimum_threshold" ] = "-850";
-    args[ "mori_signal_kernel_size" ] = "20";
-    args[ "mori_signal_threshold" ] = "100";
-    args[ "mori_signal_influence" ] = "0.5";
-    args[ "mori_lower_threshold" ] = "-1024";
-    args[ "mori_upper_threshold" ] = "0";
-    args[ "mori_delta_threshold" ] = "1";
-    args[ "labelling_upper_threshold" ] = "-600";
-    args[ "random_walker_alpha" ] = "1";
-    args[ "random_walker_beta" ] = "100";
-
-    int i = 1;
-    while( i < argc )
-    {
-      std::string cmd = argv[ i ] + 1;
-      if( cmd == "seed" )
-      {
-        std::stringstream seed;
-        seed
-          << argv[ i + 1 ] << ";"
-          << argv[ i + 2 ] << ";"
-          << argv[ i + 3 ];
-        args[ cmd ] = seed.str( );
-        i += 4;
-      }
-      else
-      {
-        args[ cmd ] = argv[ i + 1 ];
-        i += 2;
-
-      } // fi
-
-    } // elihw
-
-    bool complete = true;
-    for( std::string t: mandatory )
-      complete &= ( args.find( t ) != args.end( ) );
-
-    if( !complete )
-    {
-      std::cerr
-        << "Usage: " << argv[ 0 ] << std::endl
-        << "\t-in filename" << std::endl
-        << "\t-out filename" << std::endl
-        << "\t-seed x y z" << std::endl
-        << "\t[-out_mori filename]" << std::endl
-        << "\t[-out_signal filename]" << std::endl
-        << "\t[-out_labels filename]" << std::endl
-        << "\t[-out_diff filename]" << std::endl
-        << "\t[-mori_minimum_threshold value]" << std::endl
-        << "\t[-mori_signal_kernel_size value]" << std::endl
-        << "\t[-mori_signal_threshold value]" << std::endl
-        << "\t[-mori_signal_influence value]" << std::endl
-        << "\t[-mori_lower_threshold value]" << std::endl
-        << "\t[-mori_upper_threshold value]" << std::endl
-        << "\t[-mori_delta_threshold value]" << std::endl
-        << "\t[-labelling_upper_threshold value]" << std::endl
-        << "\t[-random_walker_alpha value]" << std::endl
-        << "\t[-random_walker_beta value]" << std::endl;
-      return( false );
-
-    } // fi
-    return( true );
+    std::cout << "Wrote \"" << fname << "\" in " << t << " s" << std::endl;
   }
 
 } // ecapseman