-//=====
-// Don't edit this file. This file is generated from xml description..
-//=====
+/*
+# ---------------------------------------------------------------------
+#
+# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+# pour la Santé)
+# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+# Previous Authors : Laurent Guigues, Jean-Pierre Roux
+# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
+#
+# This software is governed by the CeCILL-B license under French law and
+# abiding by the rules of distribution of free software. You can use,
+# modify and/ or redistribute the software under the terms of the CeCILL-B
+# license as circulated by CEA, CNRS and INRIA at the following URL
+# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+# or in the file LICENSE.txt.
+#
+# As a counterpart to the access to the source code and rights to copy,
+# modify and redistribute granted by the license, users are provided only
+# with a limited warranty and the software's author, the holder of the
+# economic rights, and the successive licensors have only limited
+# liability.
+#
+# The fact that you are presently reading this means that you have had
+# knowledge of the CeCILL-B license and that you accept its terms.
+# ------------------------------------------------------------------------
+*/
+
+
#ifndef __bbmySamplePackagemySampleBoxWithITK_h_INCLUDED__
#define __bbmySamplePackagemySampleBoxWithITK_h_INCLUDED__
+
+//
+//
+// To create a new Package with boxes that use itk don't forget 3 steps:
+//
+// 1. Modify de CMakeList.txt file of the whole project to include cmake itk mechanism.
+// 1.1 Put ON the option SET(USE_ITK ON)
+//
+// 2. Modify de CMakeList.txt file of this package.
+// 2.1. Uncomment the line SET(${BBTK_PACKAGE_NAME}_USE_ITK ON)
+// 2.2. Add the lines:
+// ${BBTK_DIR}/../../../include/bbitk # linux
+// ${BBTK_DIR}/include/bbitk # windows
+// In the SET(${BBTK_PACKAGE_NAME}_INCLUDE_DIRS section
+//
+// 3. In the .h file of your box, don't forget:
+// 3.1. Define the DIM and the TYPE of the images
+// (Comment out the BBTK_ITK_IMAGE_DIM_xxx
+// and the BBTK_ITK_IMAGE_TYPE_xxx_t you don't need)
+// Ex:
+// // Definition of the DIM and TYPE of the itkImage ..
+// #define BBTK_ITK_IMAGE_DIM_2
+// #define BBTK_ITK_IMAGE_DIM_3
+// #define BBTK_ITK_IMAGE_DIM_4
+// #define BBTK_ITK_IMAGE_TYPE_int8_t
+// #define BBTK_ITK_IMAGE_TYPE_uint8_t
+// #define BBTK_ITK_IMAGE_TYPE_int16_t
+// #define BBTK_ITK_IMAGE_TYPE_uint16_t
+// #define BBTK_ITK_IMAGE_TYPE_int32_t
+// #define BBTK_ITK_IMAGE_TYPE_uint32_t
+// #define BBTK_ITK_IMAGE_TYPE_float
+// #define BBTK_ITK_IMAGE_TYPE_double
+// 3.2. Define the ProcessTemplate method with the
+// BBTK_TEMPLATE_ITK_IMAGE_SWITCH mechanism.
+//
+// Note: We use a generic bbtk_itk_pointer to transfere the itkImage..
+//
+//
+
+
+
+// Definition of the DIM and TYPE of the itkImage ..
+#define BBTK_ITK_IMAGE_DIM_2
+#define BBTK_ITK_IMAGE_DIM_3
+#define BBTK_ITK_IMAGE_DIM_4
+#define BBTK_ITK_IMAGE_TYPE_int8_t
+#define BBTK_ITK_IMAGE_TYPE_uint8_t
+#define BBTK_ITK_IMAGE_TYPE_int16_t
+#define BBTK_ITK_IMAGE_TYPE_uint16_t
+#define BBTK_ITK_IMAGE_TYPE_int32_t
+#define BBTK_ITK_IMAGE_TYPE_uint32_t
+#define BBTK_ITK_IMAGE_TYPE_float
+#define BBTK_ITK_IMAGE_TYPE_double
+
+
+
#include "bbmySamplePackage_EXPORT.h"
#include "bbtkAtomicBlackBox.h"
#include "iostream"
+#include "bbitkImage.h"
+
+#include <itkBinaryThresholdImageFilter.h>
+
+#include "itkResampleImageFilter.h"
+#include "itkNearestNeighborInterpolateImageFunction.h"
+
namespace bbmySamplePackage
{
public bbtk::AtomicBlackBox
{
BBTK_BLACK_BOX_INTERFACE(mySampleBoxWithITK,bbtk::AtomicBlackBox);
-//=====
-// Don't edit this file. This file is generated from xml description..
-//=====
- BBTK_DECLARE_INPUT(In,double);
- BBTK_DECLARE_OUTPUT(Out,double);
+
+ BBTK_DECLARE_INPUT(In,bbitk::anyImagePointer);
+ BBTK_DECLARE_INPUT(Lower,double);
+ BBTK_DECLARE_INPUT(Upper,double);
+ BBTK_DECLARE_OUTPUT(Out,bbitk::anyImagePointer);
+
BBTK_PROCESS(Process);
- void Process();
-//=====
-// Don't edit this file. This file is generated from xml description..
-//=====
+private:
+ inline void Process();
+ template <class T> void ProcessTemplated();
+ itk::Object* mOutput;
};
BBTK_BEGIN_DESCRIBE_BLACK_BOX(mySampleBoxWithITK,bbtk::AtomicBlackBox);
-BBTK_NAME("mySampleBoxWithITK");
-BBTK_AUTHOR("_author_");
-BBTK_DESCRIPTION("_description_");
-BBTK_CATEGORY("");
-BBTK_INPUT(mySampleBoxWithITK,In,"First input",double,"");
-BBTK_OUTPUT(mySampleBoxWithITK,Out,"First output",double,"");
+ BBTK_NAME("mySampleBoxWithITK");
+ BBTK_AUTHOR("Info-Dev");
+ BBTK_DESCRIPTION("Example ITK box - CreaNewProject");
+ BBTK_CATEGORY("filter");
+ BBTK_INPUT(mySampleBoxWithITK,In,"Input image. Can be any itk::Image<T,D>*",bbitk::anyImagePointer,"");
+ BBTK_INPUT(mySampleBoxWithITK,Lower,"(200 default) Lower value for the threshold*",double,"");
+ BBTK_INPUT(mySampleBoxWithITK,Upper,"(1200 default) Upper value for the threshold*",double,"");
+ BBTK_OUTPUT(mySampleBoxWithITK,Out,"Output Image",bbitk::anyImagePointer,"");
BBTK_END_DESCRIBE_BLACK_BOX(mySampleBoxWithITK);
-//=====
-// Don't edit this file. This file is generated from xml description..
-//=====
+
+
+
+//===================================================
+void mySampleBoxWithITK::Process()
+{
+ bbtk::TypeInfo t = bbGetInputIn().type();
+ BBTK_TEMPLATE_ITK_IMAGE_SWITCH(t, this->ProcessTemplated);
+}
+//===================================================
+
+
+//===================================================
+template <class ImageType>
+void mySampleBoxWithITK::ProcessTemplated()
+{
+ bbtkDebugMessageInc("Core",9,"bbitk::BinaryThresholdImageFilter::Process<"<<bbtk::TypeName<ImageType>()<<">()"<<std::endl);
+
+ typedef itk::BinaryThresholdImageFilter<ImageType,ImageType> FilterType;
+ typename FilterType::Pointer filter = FilterType::New();
+
+ // Input
+ ImageType* in = this->bbGetInputIn().get<ImageType*>();
+ filter->SetInput( in );
+ filter->SetInsideValue (255);
+ filter->SetOutsideValue (0);
+ filter->SetLowerThreshold( bbGetInputLower() );
+ filter->SetUpperThreshold( bbGetInputUpper() );
+
+ filter->Update();
+ filter->GetOutput()->Register();
+ if (mOutput) mOutput->UnRegister();
+ mOutput = filter->GetOutput();
+ this->bbSetOutputOut( filter->GetOutput() );
+
+ bbtkDebugDecTab("Core",9);
+}
+//===================================================
+
}
// EO namespace bbmySamplePackage
git://git.creatis.insa-lyon.fr / crea.git / blobdiff