-# Check READ
-#-----------
+# Check gdcmRead
+# ==============
#
-# We just write RAW Files and AFFIM them
-# to be sure the reading was OK
+# This script :
+#
+# - gdcmreads the images of gdcmData
+# - fwrite the pixels (an nothing more), into a '.RAW' file
+# - affim them (you may replace affim by any 'Raw File' viewer)
+#
+# just to verify the ability of gdcm to 'extract' the pixels
+# out of a DICOM File
#
-
#No Swap Info
#------------
-testWrite mr176621.dcm r;
-affim filein=mr176621.dcm.raw DIMX=512 DIMY=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite mr176621.dcm r;
+affim filein=mr176621.dcm.RAW DIMX=512 DIMY=512 nbit=16
# No Transfert Syntax
#--------------------
-testWrite cr172241.dcm r;
-affim filein=cr172241.dcm.raw DIMX=1792 DIMY=2392 nbit=16 zoom=-4
-
-testWrite cr_45031.dcm r
-affim filein=cr_45031.dcm.raw DIMX=1670 DIMY=2010 nbit=16 zoom=-4
+#Big Endian
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite cr172241.dcm r;
+affim filein=cr172241.dcm.RAW DIMX=1792 DIMY=2392 nbit=16 zoom=-4
+#0008,0200 (image location) wrongly stored
+#0028,3006 (LUT Data) has a CTX VR
-testWrite CR-MONO1-10-chest.dcm r
-affim filein=CR-MONO1-10-chest.dcm.raw DIMX=440 DIMY=440 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite cr_45031.dcm r;
+affim filein=cr_45031.dcm.RAW DIMX=1670 DIMY=2010 nbit=16 zoom=-4
-testWrite CT-MONO2-12-lomb-an2.acr2 r
-affim filein=CT-MONO2-12-lomb-an2.acr2.raw DIM=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CR-MONO1-10-chest.dcm r;
+affim filein=CR-MONO1-10-chest.dcm.RAW DIMX=440 DIMY=440 nbit=16
-testWrite gdcm-MR-SIEMENS-16.acr1 r
-affim filein=gdcm-MR-SIEMENS-16.acr1.raw DIMX=256 DIMY=256 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-12-lomb-an2.acr r;
+affim filein=CT-MONO2-12-lomb-an2.acr2.RAW DIM=512 nbit=16
-testWrite gdcm-MR-SIEMENS-16.acr2 r
-affim filein=gdcm-MR-SIEMENS-16.acr2.raw DIMX=512 DIMY=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-SIEMENS-16-1.acr r;
+affim filein=gdcm-MR-SIEMENS-16-1.acr.RAW DIMX=256 DIMY=256 nbit=16
-testWrite MR-MONO2-12-an2.acr2 r
-affim filein=MR-MONO2-12-an2.acr2.raw DIMX=256 DIMY=256 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-SIEMENS-16-2.acr r;
+affim filein=gdcm-MR-SIEMENS-16-2.acr.RAW DIMX=512 DIMY=512 nbit=16
-testWrite newACR1000.nema r # == gdcmMR-SIEMENS-16.acr2
-affim filein=newACR1000.nema.raw DIMX=512 DIMY=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-12-an2.acr r;
+affim filein=MR-MONO2-12-an2.acr.RAW DIMX=256 DIMY=256 nbit=16
-testWrite oldACR00001.ima r # == gdcm-MR-SIEMENS.16.acr1
-affim filein=oldACR00001.ima.raw DIMX=256 DIMY=256 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite newACR1000.nema r; # == gdcmMR-SIEMENS-16.acr2
+affim filein=newACR1000.nema.RAW DIMX=512 DIMY=512 nbit=16
-testWrite OT-MONO2-8-a7.dcm r
-affim filein=OT-MONO2-8-a7.dcm.raw DIMX=512 DIMY=512
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite OT-MONO2-8-a7.dcm r;
+affim filein=OT-MONO2-8-a7.dcm.RAW DIMX=512 DIMY=512
#No Samples Per Pixel
#--------------------
-testWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm r
-affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm dim=750 nbit=8
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm r;
+affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.RAW dim=750 nbit=8
#Unnormalized Rectangular LibIDO format image
#--------------------------------------------
-testWrite gdcm-ACR-LibIDO.acr r
-affim filein=gdcm-ACR-LibIDO.acr.raw dimx=512 dimy=301
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-ACR-LibIDO.acr r;
+affim filein=gdcm-ACR-LibIDO.acr.RAW dimx=512 dimy=301
#Bits Allocated =12, Bits Stored=12
#----------------------------------
#MR Philips (once upon a time in Lyon-Sud)
-testWrite MR-MONO2-12-angio-an1.acr1 r
-affim filein=MR-MONO2-12-angio-an1.acr1.raw dim=256 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-12-angio-an1.acr1 r;
+affim filein=MR-MONO2-12-angio-an1.acr1.RAW dim=256 nbit=16
#RGB
#---
-testWrite US.3405.1.dcm r
-echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0"
-echo " PhotometricInterpretation=RGB"
-affim filein=US.3405.1.dcm.raw DIMX=768 DIMY=576 nbit=24
-testWrite OT-PAL-8-face.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite OT-PAL-8-face.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1"
echo " PhotometricInterpretation=PALETTE COLOR"
-affim filein=OT-PAL-8-face.dcm.raw dimx=640 dimy=480 nbit=24
+affim filein=OT-PAL-8-face.dcm.RAW dimx=640 dimy=480 nbit=24
-testWrite 8BitsUncompressedColor.dcm r
-affim filein=8BitsUncompressedColor.dcm.raw dimx=800 dimy=535 nbit=24
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 8BitsUncompressedColor.dcm r;
+affim filein=8BitsUncompressedColor.dcm.RAW dimx=800 dimy=535 nbit=24
# Implicit VR - Little Endian
#-----------------------------
-testWrite CT-MONO2-16-ankle.dcm r
- affim filein=CT-MONO2-16-ankle.dcm.raw DIMX=512 DIMY=512 nbit=16 signe=o
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-16-ankle.dcm r;
+ affim filein=CT-MONO2-16-ankle.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o
-testWrite CT-MONO2-16-ort.dcm r
-affim filein=CT-MONO2-16-ort.dcm.raw DIMX=512 DIMY=512 nbit=16 signe=o
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-16-ort.dcm r;
+affim filein=CT-MONO2-16-ort.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o
-testWrite CT-MONO2-8-abdo.dcm r
-affim filein=CT-MONO2-8-abdo.dcm.raw DIMX=512 DIMY=512
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-8-abdo.dcm r;
+affim filein=CT-MONO2-8-abdo.dcm.RAW DIMX=512 DIMY=512
-testWrite gdcm-MR-PHILIPS-16.dcm r
-affim filein=gdcm-MR-PHILIPS-16.dcm.raw DIMX=256 DIMY=256 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-16-head.dcm r;
+affim filein=MR-MONO2-16-head.dcm.RAW dim=256 nbit=16 signe=o
-testWrite MR-MONO2-16-head.dcm r
-affim filein=MR-MONO2-16-head.dcm.raw dim=256 nbit=16 signe=o
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite multiframe1Integris.dcm r;
+affim filein=multiframe1Integris.dcm.RAW dim=1024 nbit=16 zoom=-2
+affim filein=multiframe1Integris.dcm.RAW dim=1024 nbit=16 offset=31457280 zoom=-2
-testWrite multiframe1Integris.dcm r
-affim filein=multiframe1Integris.dcm.raw dim=1024 nbit=16 zoom=-2
-affim filein=multiframe1Integris.dcm.raw dim=1024 nbit=16 offset=31457280 zoom=-2
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite multiframe2GE.dcm r;
+affim filein=multiframe2GE.dcm.RAW dim=512
+affim filein=multiframe2GE.dcm.RAW dim=512 offset=14417920
-testWrite multiframe2GE.dcm r
-affim filein=multiframe2GE.dcm.raw dim=512
-affim filein=multiframe2GE.dcm.raw dim=512 offset=14417920
-
-testWrite irmPhlipsNew1.dcm r # == gdcm-MR-PHILIPS-16.dcm
-affim DIMX=256 DIMY=256 filein=irmPhlipsNew1.dcm.raw nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite irmPhlipsNew1.dcm r; # == gdcm-MR-PHILIPS-16.dcm
+affim DIMX=256 DIMY=256 filein=irmPhlipsNew1.dcm.RAW nbit=16
#avec imagette (icone)
-testWrite icone.dcm r
-echo "Hopeless till we stop considering the Tag as an identifier inside the Header"
-echo "The Tag is an identifier inside the *Dicom Dictionnary* only"
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite icone.dcm r;
affim filein=icone.dcm bypassacr=1 dim=512 nbit=16 offset=18240
affim filein=icone.dcm dim=64 offset=13984 bypassacr=1
-affim filein=icone.dcm.raw dim=512 nbit=16
+affim filein=icone.dcm.RAW dim=512 nbit=16
#Palette
#Explicit VR - Little Endian
#----------------------------
-testWrite CT-MONO2-16-brain.dcm r
-affim filein=CT-MONO2-16-brain.dcm.raw DIMX=512 DIMY=512 nbit=16 signe=o
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-16-brain.dcm r;
+affim filein=CT-MONO2-16-brain.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o
-testWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm r
-affim filein=gdcm-MR-PHILIPS-16-Multi-Seq.dcm.raw DIMX=128 DIMY=128 nbit=16
+# 7 'first level' SeQuences , 140 'second level' SeQuences ?!?
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm r;
+affim filein=gdcm-MR-PHILIPS-16-Multi-Seq.dcm.RAW DIMX=128 DIMY=128 nbit=16
+PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2
-testWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm r
-affim filein=gdcm-MR-PHILIPS-16-NonRectPix.dcm.raw DIMX=160 DIMY=64 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm r;
+affim filein=gdcm-MR-PHILIPS-16-NonRectPix.dcm.RAW DIMX=160 DIMY=64 nbit=16
-testWrite MR-MONO2-8-16x-heart.dcm r
-affim filein=MR-MONO2-8-16x-heart.dcm.raw DIMX=256 DIMY=256
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-8-16x-heart.dcm r;
+affim filein=MR-MONO2-8-16x-heart.dcm.RAW DIMX=256 DIMY=256
-testWrite NM-MONO2-16-13x-heart.dcm r
-affim filein=NM-MONO2-16-13x-heart.dcm.raw DIMX=64 DIMY=64 nbit=16
-affim filein=NM-MONO2-16-13x-heart.dcm.raw DIMX=64 DIMY=64 nbit=16 offset=98304
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite NM-MONO2-16-13x-heart.dcm r;
+affim filein=NM-MONO2-16-13x-heart.dcm.RAW DIMX=64 DIMY=64 nbit=16
+affim filein=NM-MONO2-16-13x-heart.dcm.RAW DIMX=64 DIMY=64 nbit=16 offset=98304
-testWrite sonataMonaco.dcm r
-affim filein=sonataMonaco.dcm.raw DIMX=256 DIMY=208 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite sonataMonaco.dcm r;
+affim filein=sonataMonaco.dcm.RAW DIMX=256 DIMY=208 nbit=16
#MultiFrame
-testWrite US-MONO2-8-8x-execho.dcm r
-affim filein=US-MONO2-8-8x-execho.dcm.raw DIMX=128 DIMY=120
-affim filein=US-MONO2-8-8x-execho.dcm.raw DIMX=128 DIMY=120 offset=92160
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US-MONO2-8-8x-execho.dcm r;
+affim filein=US-MONO2-8-8x-execho.dcm.RAW DIMX=128 DIMY=120
+affim filein=US-MONO2-8-8x-execho.dcm.RAW DIMX=128 DIMY=120 offset=92160
#RGB
-testWrite US-RGB-8-epicard.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US-RGB-8-epicard.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1"
echo " PhotometricInterpretation=RGB"
-affim filein=US-RGB-8-epicard.dcm.raw dimx=640 dimy=480 nbit=24
+affim filein=US-RGB-8-epicard.dcm.RAW dimx=640 dimy=480 nbit=24
-testWrite US-RGB-8-esopecho.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US-RGB-8-esopecho.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0"
echo " PhotometricInterpretation=RGB"
-affim filein=US-RGB-8-esopecho.dcm.raw dimx=256 dimy=120 nbit=24
+affim filein=US-RGB-8-esopecho.dcm.RAW dimx=256 dimy=120 nbit=24
# Non-Hierarchical, First-Order Prediction (Process 14 [Selection Value 1])
#--------------------------------------------------------------------------
# (JPEG Lossless)
-testWrite CT-MONO2-16-chest.dcm r;
-affim filein=CT-MONO2-16-chest.dcm.raw dimx=512 dimy=400 nbit=16 signe=o
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-16-chest.dcm r;
+affim filein=CT-MONO2-16-chest.dcm.RAW dimx=512 dimy=400 nbit=16 signe=o
-testWrite 012345.002.050.dcm r
-affim filein=012345.002.050.dcm.raw dim=256 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 012345.002.050.dcm r;
+affim filein=012345.002.050.dcm.RAW dim=256 nbit=16
-testWrite gdcm-JPEG-LossLess3a.dcm r;
-affim filein=gdcm-JPEG-LossLess3a.dcm.raw dim=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-JPEG-LossLess3a.dcm r; # -- bug in JPEG fragments
+affim filein=gdcm-JPEG-LossLess3a.dcm.RAW dim=512 nbit=16
-testWrite XA-MONO2-8-12x-catheter.dcm r;
-affim filein=XA-MONO2-8-12x-catheter.dcm.raw dim=512;
-affim filein=XA-MONO2-8-12x-catheter.dcm.raw dim=512 offset=262144
-affim filein=XA-MONO2-8-12x-catheter.dcm.raw dim=512 offset=2883584
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite XA-MONO2-8-12x-catheter.dcm r;
+affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512;
+affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512 offset=262144
+affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512 offset=2883584
-testWrite xa_integris.dcm r;
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite xa_integris.dcm r;
echo "a lot of fragments expected here"
-affim filein=xa_integris.dcm.raw dim=512
-affim filein=xa_integris.dcm.raw dim=512 offset=13107200
-affim filein=xa_integris.dcm.raw dim=512 offset=19660800
+affim filein=xa_integris.dcm.RAW dim=512
+affim filein=xa_integris.dcm.RAW dim=512 offset=13107200
+affim filein=xa_integris.dcm.RAW dim=512 offset=19660800
-testWrite 16BitsJpegLosslessGrayScale.dcm r
-affim filein=16BitsJpegLosslessGrayScale.dcm.raw DIMX=800 DIMY=535 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 16BitsJpegLosslessGrayScale.dcm r;
+affim filein=16BitsJpegLosslessGrayScale.dcm.RAW DIMX=800 DIMY=535 nbit=16
#comming from GE dlx via VTServer
-testWrite I9000001.dcm r
-affim filein=I9000001.dcm.raw dim=512
-affim filein=I9000001.dcm.raw dim=512 offset=7864320
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite I9000001.dcm r;
+affim filein=I9000001.dcm.RAW dim=512
+affim filein=I9000001.dcm.RAW dim=512 offset=7864320
#JPEG Extended (Process 2 & 4) // 16 bits
#-----------------------------
-testWrite gdcm-JPEG-Extended.dcm r;
-affim filein=gdcm-JPEG-Extended.dcm.raw dim=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-JPEG-Extended.dcm r;
+affim filein=gdcm-JPEG-Extended.dcm.RAW dim=512 nbit=16
-testWrite jpeglossy1.dcm r;
-affim filein=jpeglossy1.dcm.raw dim=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite jpeglossy1.dcm r;
+affim filein=jpeglossy1.dcm.RAW dim=512 nbit=16
#JPEG Baseline (Process 14)
#--------------------------
-testWrite MR-MONO2-12-shoulder.dcm r
-affim filein=MR-MONO2-12-shoulder.dcm.raw DIMX=1024 DIMY=1024 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-12-shoulder.dcm r;
+affim filein=MR-MONO2-12-shoulder.dcm.RAW DIMX=1024 DIMY=1024 nbit=16
#fichier format ecat.
-#testWrite imageEcat.ecat r
+#/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite imageEcat.ecat r
#JPEG Lossy 8 bits
#=================
#JPEG Baseline (Process 1)
#-------------------------
# Bracco Files
-testWrite US.1.2.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US.1.2.dcm r;
echo "expected : A lot of Fragments (40), nb Frames = 40 ;-)"
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0"
echo " PhotometricInterpretation=YBR_FULL_422"
-affim filein=US.1.2.dcm.raw DIMX=768 DIMY=576 nbit=24
-affim filein=US.1.2.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=13271040
-affim filein=US.1.2.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=39813120
+affim filein=US.1.2.dcm.RAW DIMX=768 DIMY=576 nbit=24
+affim filein=US.1.2.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=13271040
+affim filein=US.1.2.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=39813120
#Sequoia Acusson U11
-testWrite CLIP0001-Sequoia-U11.dcm r
-affim filein=CLIP0001-Sequoia-U11.dcm.raw DIMX=768 DIMY=576 nbit=24
-affim filein=CLIP0001-Sequoia-U11.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=1327104
-affim filein=CLIP0001-Sequoia-U11.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=13271040
-affim filein=CLIP0001-Sequoia-U11.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=26542080
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CLIP0001-Sequoia-U11.dcm r;
+echo "Troubles with 0018|6022[SL][Reference Pixel Y(0)] [4294967177] x(7fffffff)"
+
+affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24
+affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=1327104
+affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=13271040
+affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=26542080
#RLE Lossless
#-------------
-testWrite canadaAloka.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite canadaAloka.dcm r;
echo "expected pixelType=8U SamplesPerPixel=1"
echo " PlanarConfiguration=0 PhotometricInterpretation=MONOCHROME2"
echo " nb Frames (DIMZ) : 1"
-affim filein=canadaAloka.dcm.raw DIMX=608 DIMY=420
+affim filein=canadaAloka.dcm.RAW DIMX=608 DIMY=420
-testWrite FMAG0001.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite FMAG0001.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3"
echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL"
echo " nb Frames (DIMZ) : 1"
-affim filein=FMAG0001.dcm.raw DIMX=768 DIMY=576 nbit=24
+affim filein=FMAG0001.dcm.RAW DIMX=768 DIMY=576 nbit=24
-testWrite QMAG0001.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite QMAG0001.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3"
echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL"
-affim filein=QMAG0001.dcm.raw DIMX=384 DIMY=288 nbit=24;
+affim filein=QMAG0001.dcm.RAW DIMX=384 DIMY=288 nbit=24;
-testWrite US-PAL-8-10x-echo.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US-PAL-8-10x-echo.dcm r;
echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0"
echo " PhotometricInterpretation=PALETTE COLOR"
echo " nb Frames (DIMZ): 10"
echo "expected : Parsing 10 'single fragment' Segments"
echo " Reading 10 'single fragment' Segments (ouf!)"
-affim filein=US-PAL-8-10x-echo.dcm.raw DIMX=600 DIMY=430 nbit=24
-affim filein=US-PAL-8-10x-echo.dcm.raw DIMX=600 DIMY=430 nbit=24 offset=774000
-affim filein=US-PAL-8-10x-echo.dcm.raw DIMX=600 DIMY=430 nbit=24 offset=1548000
-affim filein=US-PAL-8-10x-echo.dcm.raw DIMX=600 DIMY=430 nbit=24 offset=6966000
+affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24
+affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=774000
+affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=1548000
+affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=6966000
-testWrite 8BitsRunLengthGrayScale.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 8BitsRunLengthGrayScale.dcm r;
echo "expected : correct Gray image"
-affim filein=8BitsRunLengthGrayScale.dcm.raw DIMX=800 DIMY=535
+affim filein=8BitsRunLengthGrayScale.dcm.RAW DIMX=800 DIMY=535
-testWrite 8BitsRunLengthColor.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 8BitsRunLengthColor.dcm r;
echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=2"
echo " PhotometricInterpretation=PALETTE COLOR"
echo "expected correct color image"
-affim filein=8BitsRunLengthColor.dcm.raw DIMX=800 DIMY=535 nbit=24
+affim filein=8BitsRunLengthColor.dcm.RAW DIMX=800 DIMY=535 nbit=24
#RLE 16 bits --> Try to find some more images
-testWrite 16BitsRunLengthGrayScale.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 16BitsRunLengthGrayScale.dcm r;
echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0"
echo " PhotometricInterpretation=MONOCHROME2"
-affim filein=16BitsRunLengthGrayScale.dcm.raw DIMX=800 DIMY=535 nbit=16
+affim filein=16BitsRunLengthGrayScale.dcm.RAW DIMX=800 DIMY=535 nbit=16
#Were supposed to be bugged
#--------------------------
#(break xmedcon)
-testWrite 00191113.dcm r
-affim filein=00191113.dcm.raw DIMX=512 DIMY=512
-affim filein=00191113.dcm.raw DIMX=512 DIMY=512 offset=786432
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 00191113.dcm r;
+affim filein=00191113.dcm.RAW DIMX=512 DIMY=512
+affim filein=00191113.dcm.RAW DIMX=512 DIMY=512 offset=786432
+
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite DermaColorLossLess.dcm r;
+affim filein=DermaColorLossLess.dcm.RAW DIMX=117 DIMY=181 nbit=24
-testWrite DermaColorLossLess.dcm r
-affim filein=DermaColorLossLess.dcm.raw DIMX=117 DIMY=181 nbit=24
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite RadBWLossLess.dcm r;
+affim filein=RadBWLossLess.dcm.RAW DIMX=136 DIMY=92 nbit=16
-testWrite RadBWLossLess.dcm r
-affim filein=RadBWLossLess.dcm.raw DIMX=136 DIMY=92 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite Wrist.pap r
+affim filein=Wrist.pap.RAW nbit=16 dimx=720 dimy=360
#Known as BUGGED !
#----------------
#Rectangular old 24 Bits image
-testWrite gdcm-RGB-LibIDORect.acr r
-affim filein=gdcm-RGB-LibIDORect.acr.raw DIMX=400 DIMY=100 nbit=24
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-RGB-LibIDORect.acr r;
+affim filein=gdcm-RGB-LibIDORect.acr.RAW DIMX=400 DIMY=100 nbit=24
#MR GE GENESIS_SIGNA Palo Alto
-testWrite DicomSampleNastyGEImage.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite DicomSampleNastyGEImage.dcm r;
echo "WAS expected : wrong lenth (13) for 0008|103e"
-affim filein=DicomSampleNastyGEImage.dcm.raw DIMX=256 DIMY=256 nbit=16
+affim filein=DicomSampleNastyGEImage.dcm.RAW DIMX=256 DIMY=256 nbit=16
#MR Philips NTSCAN Hop. Neuro Lyon
-testWrite philipsMR-lossy.ima r;
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite philipsMR-lossy.ima r;
echo "WAS expected : 'Bogus Huffman table definition' on philipsMR-lossy.ima"
-echo "IS expected : 'JERR_BAD_HUFF_TABLE sym 16 (>15') but the show goes on"
+echo "IS expected : 'JERR_BAD_HUFF_TABLE sym 16 (>15)' but the show goes on"
echo "breaks xmedcon"
-affim filein=philipsMR-lossy.ima.raw dim=512 nbit=16
+affim filein=philipsMR-lossy.ima.RAW dim=512 nbit=16
#CT Siemens Hop. Salengro Lille
-testWrite gdcm-JPEG-LossLess3a.dcm r;
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-JPEG-LossLess3a.dcm r;
echo "expected : wrong sequence delimiter (b00c,0eb6) at end of pixels";
echo "xmedcon says 'error: Unexpected end of file'"
-affim filein=gdcm-JPEG-LossLess3a.dcm.raw dim=512 nbit=16
+affim filein=gdcm-JPEG-LossLess3a.dcm.RAW dim=512 nbit=16
vtkgdcmViewer gdcm-JPEG-LossLess3a.dcm
#CR Philips Thoravision Hop Cardio Lyon
-testWrite gdcm-JPEG-LossLessThoravision.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-JPEG-LossLessThoravision.dcm r;
echo "expected : 147 fragments,length : 29860 + 145*32760 + 14416"
echo "breaks xmedcom, breaks e-film"
echo "WAS expected : hashed image -with jLBJpeg-"
echo "IS expected : Seg Fault"
-affim filein=gdcm-JPEG-LossLessThoravision.dcm.raw DIMX=1876 DIMY=2076 nbit=16
+affim filein=gdcm-JPEG-LossLessThoravision.dcm.RAW DIMX=1876 DIMY=2076 nbit=16
#MR Picker ST. ANTHONY HOSPITAL
-testWrite MR.6799.1.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR.6799.1.dcm r;
echo "OK; DICOM Image with NO Preamble"
-affim filein=MR.6799.1.dcm.raw dim=512 nbit=16
+affim filein=MR.6799.1.dcm.RAW dim=512 nbit=16
#Segmented Palette Color LUT Data
-testWrite gdcm-US-ALOKA-16.dcm r
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-US-ALOKA-16.dcm r;
echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0"
echo " PhotometricInterpretation=PALETTE COLOR"
echo "expected : Gray image since 'Segmented xxx Palette Color LUT Data' not yet taken into account"
echo "breaks xmedcom"
echo "breaks vtkgdcmViewer (bad result : 24 bits expected; 16 found in Pixels area)"
vtkgdcmViewer gdcm-US-ALOKA-16.dcm
-affim dimx=640 dimy=480 filein=gdcm-US-ALOKA-16.dcm.raw nbit=16
+affim dimx=640 dimy=480 filein=gdcm-US-ALOKA-16.dcm.RAW nbit=16
# bugged Siemens 'Leonardo' image
-testWrite 8078283Leonardo.dcm r
-affim filein=8078283Leonardo.dcm.raw dim=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 8078283Leonardo.dcm r;
+affim filein=8078283Leonardo.dcm.RAW dim=512 nbit=16
#CT McTwin Elscint C.H.R.U LILLE C.HURIEZ
-testWrite MxTwinLossLess.dcm r
-affim filein=MxTwinLossLess.dcm.raw DIMX=512 DIMY=512 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MxTwinLossLess.dcm r;
+affim filein=MxTwinLossLess.dcm.RAW DIMX=512 DIMY=512 nbit=16
# MRI image from VPRO burned CD
-testWrite mriThruVPRO.dcm r
-affim filein=mriThruVPRO.dcm.raw DIMX=256 DIMY=256 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite mriThruVPRO.dcm r;
+affim filein=mriThruVPRO.dcm.RAW DIMX=256 DIMY=256 nbit=16
echo "expected : tasteless SHIT !"
echo "breaks Siemens Leonardo viewer . JPEG encoding is bugged?"
# gdcm made Theralys image
# due to H table, a SeQuence is tagged with 0 length
# when using gdcmFile::WriteDcmXXX
-testWrite fromTheralys.dcm r
-affim filein=fromTheralys.dcm.raw dim=256 nbit=16
+/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite fromTheralys.dcm r;
+affim filein=fromTheralys.dcm.RAW dim=256 nbit=16
git://git.creatis.insa-lyon.fr / gdcmData.git / blobdiff