Merge dose by region uncertainties using Gate uncertainty calculation

[clitk.git] / cluster_tools / gate_power_merge.sh

diff --git a/cluster_tools/gate_power_merge.sh b/cluster_tools/gate_power_merge.sh
index 8fa4cfc3b15935562fc7c5b898e22ae020f6755d..b2ced88862b9f61b4f6cd20ab4c45006502b68ac 100755 (executable)
--- a/cluster_tools/gate_power_merge.sh
+++ b/cluster_tools/gate_power_merge.sh
@@ -207,6 +207,7 @@ function merge_doseByRegions {
     echo "  ${indent}creating ${merged}"
     local count=0
     start_bar $#
+    source ${doseMerger}
     while test $# -gt 0
     do
         local partial="$1"
@@ -221,7 +222,7 @@ function merge_doseByRegions {
         fi
 
         update_bar ${count} "adding ${partial}"
-        ${doseMerger} -i "${merged}" -j "${partial}" -o "${merged}" 2> /dev/null > /dev/null || warning "error while calling ${doseMerger}"
+        addToPartialResult -i "${merged}" -j "${partial}" -o "${merged}" 2> /dev/null > /dev/null || warning "error while calling ${doseMerger}"
     done
     end_bar
     echo "  ${indent}merged ${count} files"