-#=========================================================
-SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -I${ITK_DIR}/gdcm/src/")
-
-#=========================================================
-INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
-#=========================================================
-
#=========================================================
# make clitk libraries*
CONFIGURE_FILE(clitkConfiguration.h.in ${PROJECT_BINARY_DIR}/clitkConfiguration.h)
clitkListOfPair.cxx
clitkTimer.cxx
clitkImageCommon.cxx
+ clitkTransformUtilities.cxx
clitkIO.cxx
+ clitkGateAsciiImageIO.cxx
+ clitkGateAsciiImageIOFactory.cxx
clitkVoxImageIO.cxx
clitkVoxImageIOFactory.cxx
clitkVfImageIO.cxx
clitkXdrImageIOReader.cxx
clitkXdrImageIOWriter.cxx
clitkXdrImageIOFactory.cxx
+ clitkHndImageIO.cxx
+ clitkHndImageIOFactory.cxx
+ clitkDicomRTDoseIO.cxx
+ clitkDicomRTDoseIOFactory.cxx
clitkOrientation.cxx
- vvImage.cxx
clitkImageToImageGenericFilterBase.cxx
-)
+ clitkExceptionObject.cxx
+ clitkFilterBase.cxx
+ clitkMemoryUsage.cxx
+ vvImage.cxx
+ vvImageReader.cxx
+ vvImageWriter.cxx
+)
+IF(CLITK_PRIVATE_FEATURES)
+ SET(clitkCommon_SRC ${clitkCommon_SRC}
+ ${PROJECT_SOURCE_DIR}/private_features/clitkUsfImageIO.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkUsfImageIOFactory.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkUSVoxImageIO.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkUSVoxImageIOFactory.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkSvlImageIO.cxx
+ ${PROJECT_SOURCE_DIR}/private_features/clitkSvlImageIOFactory.cxx
+ )
+ENDIF(CLITK_PRIVATE_FEATURES)
+### Declare clitkCommon library
ADD_LIBRARY(clitkCommon STATIC ${clitkCommon_SRC})
-TARGET_LINK_LIBRARIES(clitkCommon vtkCommon vtkImaging ITKBasicFilters)
+
+IF(NOT ${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
+ TARGET_LINK_LIBRARIES(clitkCommon statgrab)
+ENDIF(NOT ${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
+
+### Check if ITK was compiled with SYSTEM_GDCM = ON and set the gdcm libraries accordingly
+SET(CLITK_USE_SYSTEM_GDCM FALSE)
+IF(ITK_VERSION_MAJOR LESS "4")
+ IF(ITK_USE_SYSTEM_GDCM)
+ SET(CLITK_USE_SYSTEM_GDCM TRUE)
+ ENDIF(ITK_USE_SYSTEM_GDCM)
+ELSE(ITK_VERSION_MAJOR LESS "4")
+ SET(GDCM_INCLUDE ".*include/gdcm-.*")
+ #SET(GDCM_INCLUDE ".*/Source/Common")
+ IF(ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE})
+ SET(CLITK_USE_SYSTEM_GDCM TRUE)
+ ELSE(ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE})
+ MESSAGE("NOT USING SYSTEM_GDCM!!!!!!!")
+ ENDIF(ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE})
+ENDIF(ITK_VERSION_MAJOR LESS "4")
+
+IF(CLITK_USE_SYSTEM_GDCM)
+ SET(CLITK_GDCM_LIBRARIES gdcmDSED)
+ENDIF(CLITK_USE_SYSTEM_GDCM)
+
+TARGET_LINK_LIBRARIES(clitkCommon vtkCommon vtkImaging ${ITK_LIBRARIES} ${CLITK_GDCM_LIBRARIES})
ADD_LIBRARY(clitkDicomRTStruct STATIC
clitkDicomRT_Contour.cxx
clitkDicomRT_ROI.cxx
clitkDicomRT_StructureSet.cxx
- clitkDicomRT_ROI_ConvertToImageFilter.cxx
+ clitkDicomRTStruct2ImageFilter.cxx
)
+TARGET_LINK_LIBRARIES(clitkDicomRTStruct vtkHybrid ${CLITK_GDCM_LIBRARIES})
+
#ADD_LIBRARY(clitkCommonShared SHARED ${clitkCommon_SRC})
#SET_TARGET_PROPERTIES(clitkCommonShared PROPERTIES COMPILE_FLAGS -fPIC)
+