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[clitk.git] / common / clitkDicomRTStruct2ImageFilter.cxx

diff --git a/common/clitkDicomRTStruct2ImageFilter.cxx b/common/clitkDicomRTStruct2ImageFilter.cxx
index bf515a423b460ec958a6dd624bea7587103212c2..bf4d4c432d8649ba2c4c5566b356070cd708c535 100644 (file)
--- a/common/clitkDicomRTStruct2ImageFilter.cxx
+++ b/common/clitkDicomRTStruct2ImageFilter.cxx
@@ -103,6 +103,7 @@ void clitk::DicomRTStruct2ImageFilter::SetImage(vvImage::Pointer image)
   mOrigin.resize(3);
   mSize.resize(3);
   mDirection.resize(3);
+  mTransformMatrix = image->GetTransform()[0]->GetMatrix();
   for(unsigned int i=0; i<3; i++) {
     mSpacing[i] = image->GetSpacing()[i];
     mOrigin[i] = image->GetOrigin()[i];
@@ -179,7 +180,7 @@ void clitk::DicomRTStruct2ImageFilter::Update()
   }
 
   // Get Mesh
-  vtkPolyData * mesh = mROI->GetMesh();  
+  vtkPolyData * mesh = mROI->GetMesh();
 
   // Get bounds
   double *bounds=mesh->GetBounds();
@@ -229,7 +230,6 @@ void clitk::DicomRTStruct2ImageFilter::Update()
   extend[0] = ceil((bounds[1]-origin[0])/mSpacing[0]+4);
   extend[1] = ceil((bounds[3]-origin[1])/mSpacing[1]+4);
   extend[2] = ceil((bounds[5]-origin[2])/mSpacing[2]+4);
-
   // If no crop, set initial image size/origin
   if (!mCropMask) {
     for(int i=0; i<3; i++) {
@@ -238,6 +238,8 @@ void clitk::DicomRTStruct2ImageFilter::Update()
     }
   }
 
+std::cout << "origin " << origin[0] << " " << origin[1] << " " << origin[2] << std::endl;
+std::cout << "extend " << extend[0] << " " << extend[1] << " " << extend[2] << std::endl;
   // Create new output image
   mBinaryImage = vtkSmartPointer<vtkImageData>::New();
 #if VTK_MAJOR_VERSION <= 5