#include "clitkDicomRT_Contour.h"
#include "vvImage.h"
+#include <vtkMatrix4x4.h>
+#include "clitkConfiguration.h"
+#if CLITK_USE_SYSTEM_GDCM == 1
+#include <vtkGDCMPolyDataReader.h>
+#include <vtkRTStructSetProperties.h>
+#endif
+
namespace clitk {
//--------------------------------------------------------------------
itkNewMacro(Self);
void Print(std::ostream & os = std::cout) const;
-#if GDCM_MAJOR_VERSION == 2
- void Read(std::map<int, std::string> & rois, gdcm::Item const & item);
-#else
- void Read(std::map<int, std::string> & rois, gdcm::SQItem * item);
-#endif
- void SetFromBinaryImage(vvImage * image, int n,
+ void SetFromBinaryImage(vvImage::Pointer image, int n,
std::string name,
std::vector<double> color,
std::string filename);
int GetROINumber() const;
+ void SetROINumber(int);
const std::string & GetName() const;
const std::string & GetFilename() const;
const std::vector<double> & GetDisplayColor() const;
double GetForegroundValueLabelImage() const;
void SetForegroundValueLabelImage(double bg);
- void SetImage(vvImage * im);
+ void SetImage(vvImage::Pointer im);
DicomRT_Contour* GetContour(int n);
- double GetContourSpacing() const {return mZDelta;}
+ void SetTransformMatrix(vtkMatrix4x4* matrix);
+
+ // Compute a vtk mesh from the dicom contours
+ void ComputeMeshFromContour();
+ void ComputeContoursFromImage();
+ // Indicate if the mesh is uptodate according to the dicom
+ void SetDicomUptodateFlag(bool b) { m_DicomUptodateFlag = b; }
+ bool GetDicomUptoDateFlag() const { return m_DicomUptodateFlag; }
+ void SetName(std::string n) { mName = n; }
+
+ // Read from DICOM RT STRUCT
+#if GDCM_MAJOR_VERSION >= 2
+ bool Read(gdcm::Item * itemInfo, gdcm::Item * itemContour);
+ void UpdateDicomItem();
+#else
+ void Read(std::map<int, std::string> & rois, gdcm::SQItem * item);
+#endif
+
+#if CLITK_USE_SYSTEM_GDCM == 1
+ void Read(vtkSmartPointer<vtkGDCMPolyDataReader> & reader, int roiindex);
+#endif
+
protected:
- void ComputeMesh();
std::string mName;
std::string mFilename;
int mNumber;
std::vector<double> mColor;
std::vector<DicomRT_Contour::Pointer> mListOfContours;
vtkSmartPointer<vtkPolyData> mMesh;
+ vtkSmartPointer<vtkMatrix4x4> mTransformMatrix;
bool mMeshIsUpToDate;
vvImage::Pointer mImage;
double mBackgroundValue;
double mForegroundValue;
- ///Spacing between two contours
- double mZDelta;
+ bool m_DicomUptodateFlag;
+
+#if GDCM_MAJOR_VERSION >= 2
+ gdcm::Item * mItemInfo;
+ gdcm::Item * mItemContour;
+ gdcm::SmartPointer<gdcm::SequenceOfItems> mContoursSequenceOfItems;
+#endif
private:
DicomRT_ROI();