Debug clitkImageConvert tool

[clitk.git] / common / clitkDicomRT_StructureSet.h

diff --git a/common/clitkDicomRT_StructureSet.h b/common/clitkDicomRT_StructureSet.h
index 5e4cf972d0a158284d4d5e721865bb0bef5eb016..c26122ee1976884fe0fa8c0ce887bc370150ef69 100644 (file)
--- a/common/clitkDicomRT_StructureSet.h
+++ b/common/clitkDicomRT_StructureSet.h
@@ -27,8 +27,16 @@
 // vv
 #include "vvImage.h"
 
+// gdcm
+#include "clitkConfiguration.h"
+#if CLITK_USE_SYSTEM_GDCM == 1
+#include <vtkGDCMPolyDataReader.h>
+#include <vtkRTStructSetProperties.h>
+#endif
+
 // gdcm
 #if GDCM_MAJOR_VERSION == 2
+// This is not use if CLITK_USE_SYSTEM_GDCM==1
 #include "gdcmReader.h"
 #include "gdcmWriter.h"
 #include "gdcmAttribute.h"
@@ -44,15 +52,21 @@ public:
   typedef itk::SmartPointer<Self> Pointer;
   itkNewMacro(Self);
 
-  typedef typename std::map<int, clitk::DicomRT_ROI::Pointer>::iterator ROIIteratorType;
-  typedef typename std::map<int, clitk::DicomRT_ROI::Pointer>::const_iterator ROIConstIteratorType;
+  typedef std::map<int, clitk::DicomRT_ROI::Pointer> ROIMapContainer;
+  typedef ROIMapContainer::iterator ROIIteratorType;
+  typedef ROIMapContainer::const_iterator ROIConstIteratorType;
 
   void Print(std::ostream & os = std::cout) const;
   void Read(const std::string & filename);
+  bool IsDicomRTStruct(const std::string & filename);
   void Write(const std::string & filename);
 
   clitk::DicomRT_ROI * GetROIFromROINumber(int n);
-  std::map<int, clitk::DicomRT_ROI::Pointer> & GetROIs() { return mROIs; }
+  clitk::DicomRT_ROI* GetROIFromROIName(const std::string& name);
+  //clitk::DicomRT_ROI* GetROIFromROINameRegEx(const std::string& regEx);
+  clitk::DicomRT_ROI* GetROIFromROINameSubstr(const std::string& s);
+  ROIMapContainer * GetROIsFromROINameSubstr(const std::string& s);
+  ROIMapContainer & GetROIs() { return mROIs; }
   const std::string & GetStudyID() const;
   const std::string & GetStudyTime() const;
   const std::string & GetStudyDate() const;