Authors belong to:
- University of LYON http://www.universite-lyon.fr/
- - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
+ - Léon Bérard cancer center http://www.centreleonberard.fr
- CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
This software is distributed WITHOUT ANY WARRANTY; without even
- BSD See included LICENSE.txt file
- CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-======================================================================-====*/
+ ===========================================================================**/
+
#ifndef CLITKIMAGECOMMON_CXX
#define CLITKIMAGECOMMON_CXX
-/**
- ------------------------------------------------=
- * @file clitkImageCommon.cxx
- * @author David Sarrut <david.sarrut@creatis.insa-lyon.fr>
- * @date 02 Oct 2007 14:30:47
- *
- * @brief
- *
- *
- ------------------------------------------------=*/
#include "clitkImageCommon.h"
+#include "clitkCommon.h"
//--------------------------------------------------------------------
void clitk::ReadImageDimensionAndPixelType(const std::string & filename,
- int & dimension,
- std::string & pixeType)
+ int & dimension,
+ std::string & pixeType)
{
itk::ImageIOBase::Pointer genericReader =
itk::ImageIOFactory::CreateImageIO(filename.c_str(), itk::ImageIOFactory::ReadMode);
if (!genericReader) {
- std::cerr << "Image file format unknown while reading file <" << filename << ">" << std::endl;
- exit(0);
+ clitkExceptionMacro("Image file format unknown while reading file <" << filename << ">");
}
genericReader->SetFileName(filename.c_str());
genericReader->ReadImageInformation();
//--------------------------------------------------------------------
void clitk::ReadImageDimensionAndPixelType(const std::string & filename,
- int & dimension,
- std::string & pixeType, int & components)
+ int & dimension,
+ std::string & pixeType, int & components)
{
itk::ImageIOBase::Pointer genericReader =
itk::ImageIOFactory::CreateImageIO(filename.c_str(), itk::ImageIOFactory::ReadMode);
if (!genericReader) {
- std::cerr << "Image file format unknown while reading " << filename << std::endl;
- exit(0);
+ clitkExceptionMacro("Image file format unknown while reading file <" << filename << ">");
}
genericReader->SetFileName(filename.c_str());
genericReader->ReadImageInformation();
}
//--------------------------------------------------------------------
-//--------------------------------------------------------------------
-/* Read a dicom header
-gdcm::File * clitk::readDicomHeader(const std::string & filename,
- const bool verbose)
-{
- if (verbose) {
- std::cout << "Reading DICOM <" << filename << ">" << std::endl;
- }
- gdcm::File *header = new gdcm::File();
- header->SetFileName(filename);
- header->SetMaxSizeLoadEntry(16384); // required ?
- header->Load();
- return header;
-}
-*///--------------------------------------------------------------------
-
//--------------------------------------------------------------------
itk::ImageIOBase::Pointer clitk::readImageHeader(const std::string & filename, bool exit_on_error)
{
itk::ImageIOFactory::CreateImageIO(filename.c_str(), itk::ImageIOFactory::ReadMode);
if (!reader) {
if (exit_on_error) { //default behavior for tools who don't handle the problem
- std::cerr << "Error reading file " << filename << ", exiting immediately" << std::endl;
- std::exit(-1);
- } else
- return NULL;
+ clitkExceptionMacro("Error reading file " << filename << ", exiting immediately");
+ } else return (itk::ImageIOBase *) ITK_NULLPTR;
}
reader->SetFileName(filename);
reader->ReadImageInformation();
for(unsigned int i=0; i< dim-1; i++)
os << inputSize[i] << "x";
os << inputSize[dim-1]
- << " ";
+ << " ";
for(unsigned int i=0; i< dim-1; i++)
os << inputSpacing[i] << "x";
os << inputSpacing[dim-1]
- << " ";
+ << " ";
for(unsigned int i=0; i< dim-1; i++)
os << inputOrigin[i] << "x";
os << inputOrigin[dim-1] << " ";