BUG seed_arg was used instead of seedRadius_arg

[clitk.git] / common / clitkImageToImageGenericFilterBase.cxx

diff --git a/common/clitkImageToImageGenericFilterBase.cxx b/common/clitkImageToImageGenericFilterBase.cxx
index ee9dcf8cb454164c73c76238542c547c35e7d19d..5f9cfac54d283c092418ca372ea6355577d59043 100644 (file)
--- a/common/clitkImageToImageGenericFilterBase.cxx
+++ b/common/clitkImageToImageGenericFilterBase.cxx
@@ -3,7 +3,7 @@
 
   Authors belong to:
   - University of LYON              http://www.universite-lyon.fr/
-  - Léon Bérard cancer center       http://oncora1.lyon.fnclcc.fr
+  - Léon Bérard cancer center       http://www.centreleonberard.fr
   - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
 
   This software is distributed WITHOUT ANY WARRANTY; without even
@@ -14,7 +14,7 @@
 
   - BSD        See included LICENSE.txt file
   - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-======================================================================-====*/
+===========================================================================**/
 
 // clitk
 #include "clitkImageToImageGenericFilterBase.h"
@@ -36,6 +36,7 @@ clitk::ImageToImageGenericFilterBase::ImageToImageGenericFilterBase(std::string
   m_FailOnImageTypeError = true;
   m_ReadOnDisk = true;
   m_WriteOnDisk = true;
+  m_WriteCompression = false;
   // m_LastError = "";
   // StopOnErrorOn();
   SetFilterBase(NULL);
@@ -72,6 +73,14 @@ void clitk::ImageToImageGenericFilterBase::EnableWriteOnDisk(bool b)
 //--------------------------------------------------------------------
 
 
+//--------------------------------------------------------------------
+void clitk::ImageToImageGenericFilterBase::EnableWriteCompression(bool b)
+{
+  m_WriteCompression = b;
+}
+//--------------------------------------------------------------------
+
+
 //--------------------------------------------------------------------
 void clitk::ImageToImageGenericFilterBase::SetInputFilename(const std::string & filename)
 {
@@ -149,8 +158,10 @@ void clitk::ImageToImageGenericFilterBase::GetInputImageDimensionAndPixelType(un
       pixeltype = m_InputVVImages[0]->GetScalarTypeAsITKString();
       dim = m_InputVVImages[0]->GetNumberOfDimensions();
       components = m_InputVVImages[0]->GetNumberOfScalarComponents();
-    } else
+    } else {
+      clitkExceptionMacro("No input given in this ImageToImageGenericFilter.");
       assert(false); //No input image, shouldn't happen
+    }
   }
   if (m_IOVerbose) {
     std::cout << "Input is " << m_Dim << "D " << m_PixelTypeName << "." << std::endl;
@@ -319,7 +330,7 @@ template<class ImageType>
 void clitk::ImageToImageGenericFilterBase::SetNextOutput(typename ImageType::Pointer output)
 {
   if (m_WriteOnDisk && m_OutputFilenames.size()) {
-    clitk::writeImage<ImageType>(output, m_OutputFilenames.front(), m_IOVerbose);
+    clitk::writeImage<ImageType>(output, m_OutputFilenames.front(), m_IOVerbose, m_WriteCompression);
     m_OutputFilenames.pop_front();
   }
   if (m_InputVVImages.size()) //We assume that if a vv image is set as input, we want one as the output