+/*=========================================================================
+ Program: vv http://www.creatis.insa-lyon.fr/rio/vv
+
+ Authors belong to:
+ - University of LYON http://www.universite-lyon.fr/
+ - Léon Bérard cancer center http://www.centreleonberard.fr
+ - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
+
+ This software is distributed WITHOUT ANY WARRANTY; without even
+ the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE. See the copyright notices for more information.
+
+ It is distributed under dual licence
+
+ - BSD See included LICENSE.txt file
+ - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+===========================================================================**/
+
#ifndef CLITKIMAGETOIMAGEGENERICFILTERBASE_H
#define CLITKIMAGETOIMAGEGENERICFILTERBASE_H
-#include "clitkCommon.h"
+
+// clitk
#include "clitkImageCommon.h"
#include "clitkCommonGenericFilter.h"
+#include "clitkFilterBase.h"
-// itk include
+// itk
#include <itkImage.h>
-// vv include
+// vv
#include "vvImage.h"
#include "vvFromITK.h"
#include "vvToITK.h"
// Filters information
const std::string & GetFilterName();
void SetFilterName(std::string & n);
-
+
// Generic IO
/// Returns the dimension and pixel type of the *first* input
void GetInputImageDimensionAndPixelType(unsigned int& dim, std::string& pixeltype,
unsigned int & components);
-
// File IO
void SetInputFilename(const std::string & filename);
void AddInputFilename(const std::string & filename);
void SetInputFilenames(const std::vector<std::string> & filenames);
void EnableReadOnDisk(bool b);
+ void EnableWriteOnDisk(bool b);
+ void EnableWriteCompression(bool b);
void SetOutputFilename(const std::string & filename);
- void AddOutputFilename(const std::string & filename);
+ void AddOutputFilename(const std::string filename);
void SetOutputFilenames(const std::vector<std::string> & filenames);
std::string GetOutputFilename();
void SetIOVerbose(bool b);
// Main function to call for using the filter.
virtual bool Update() = 0;
+ // Get the associated filter
+ FilterBase * GetFilterBase() { return m_FilterBase; }
+
+ // Indicate that the filter must stop as soon as possible (if threaded)
+ void DeleteLastOutputImage();
+
protected:
- bool mReadOnDisk;
+ bool m_ReadOnDisk;
+ bool m_WriteOnDisk;
+ bool m_WriteCompression;
+
/// Call this function to dispatch an output towards the correct sink
template<class ImageType>
void SetNextOutput(typename ImageType::Pointer output);
template<class ImageType>
typename ImageType::Pointer GetInput(unsigned int n);
- std::vector<std::string> mInputFilenames;
- std::list<std::string> mOutputFilenames;
-
- bool mIOVerbose;
- unsigned int mDim;
- std::string mPixelTypeName;
- unsigned int mNbOfComponents;
- std::string mFilterName;
+ std::vector<std::string> m_InputFilenames;
+ std::list<std::string> m_OutputFilenames;
+
+ bool m_IOVerbose;
+ unsigned int m_Dim;
+ std::string m_PixelTypeName;
+ unsigned int m_NbOfComponents;
+ std::string m_FilterName;
- std::vector<vvImage::Pointer> mInputVVImages;
- std::vector<vvImage::Pointer> mOutputVVImages;
+ std::vector<vvImage::Pointer> m_InputVVImages;
+ std::vector<vvImage::Pointer> m_OutputVVImages;
void ImageTypeError();
void SetImageTypeError();
- bool mFailOnImageTypeError;
+ bool m_FailOnImageTypeError;
+
+ // std::string m_LastError;
+ void SetFilterBase(FilterBase * f) { m_FilterBase = f; }
+ FilterBase * m_FilterBase;
+ // bool m_StopOnError;
}; // end class clitk::ImageToImageGenericFilter
#define ADD_VEC_IMAGE_TYPE(DIM, COMP, PT) this->mImageTypesManager.template AddNewDimensionAndPixelType<DIM,COMP, PT>();
#define ADD_IMAGE_TYPE(DIM, PT) this->mImageTypesManager.template AddNewDimensionAndPixelType<DIM, PT>();
+#define ADD_DEFAULT_IMAGE_TYPES(DIM) ADD_IMAGE_TYPE(DIM, char); \
+ ADD_IMAGE_TYPE(DIM, uchar); \
+ ADD_IMAGE_TYPE(DIM, short); \
+ ADD_IMAGE_TYPE(DIM, ushort); \
+ ADD_IMAGE_TYPE(DIM, int); \
+ ADD_IMAGE_TYPE(DIM, float); \
+ ADD_IMAGE_TYPE(DIM, double);
+#define ADD_DEFAULT_VEC_IMAGE_TYPES ADD_VEC_IMAGE_TYPE(2,2,float); \
+ ADD_VEC_IMAGE_TYPE(2,3,float); \
+ ADD_VEC_IMAGE_TYPE(3,3,float);
//#include "clitkImageToImageGenericFilterBase.txx"