Authors belong to:
- University of LYON http://www.universite-lyon.fr/
- - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
+ - Léon Bérard cancer center http://www.centreleonberard.fr
- CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
This software is distributed WITHOUT ANY WARRANTY; without even
- BSD See included LICENSE.txt file
- CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-======================================================================-====*/
+===========================================================================**/
#ifndef VVIMAGE_CXX
#define VVIMAGE_CXX
// vtk
#include <vtkImageData.h>
-#include <vtkImageReslice.h>
#include <vtkTransform.h>
+#include <vtkDataObject.h>
+#include <vtkStreamingDemandDrivenPipeline.h>
+#include <vtkInformation.h>
+#include <vtkVersion.h>
// std
#include <cassert>
//--------------------------------------------------------------------
-vvImage::vvImage():mTransform(vtkSmartPointer<vtkTransform>::New())
+vvImage::vvImage()
{
Init();
}
mTimeSpacing = 1;
mTimeOrigin = 0;
mImageDimension = 0;
+ mrange[0] = std::numeric_limits<int>::max();;//min
+ mrange[1] = std::numeric_limits<int>::min();;//max
}
//--------------------------------------------------------------------
//--------------------------------------------------------------------
vvImage::~vvImage()
{
- // DD("vvImage got deleted!");
Reset();
}
//--------------------------------------------------------------------
//--------------------------------------------------------------------
void vvImage::Reset()
{
- mVtkImages.resize(0);
- mTransformedVtkImages.resize(0);
- mVtkImageReslice.resize(0);
-
+ mVtkImages.clear();
Init();
}
//--------------------------------------------------------------------
+//--------------------------------------------------------------------
+void vvImage::AddVtkImage(vtkImageData* input)
+{
+ // RP: 20/12/2011
+ // Note that we're simply adding a new image to the vector.
+ // mItkToVtkConverters is therefore not being updated, but
+ // up to here it's not being used anyway...
+ mImageDimension = 0;
+#if VTK_MAJOR_VERSION <= 5
+ int* extent = input->GetWholeExtent();
+#else
+ int* extent = input->GetInformation()->Get(vtkDataObject::DATA_EXTENT());
+#endif
+ if (extent[4] != extent[5])
+ mImageDimension = 3;
+ else if (extent[3] != extent[4])
+ mImageDimension = 2;
+ else if (extent[0] != extent[1])
+ mImageDimension = 1;
+
+ mVtkImages.push_back(input);
+}
+
+//--------------------------------------------------------------------
+
//--------------------------------------------------------------------
int vvImage::GetNumberOfSpatialDimensions()
{
//--------------------------------------------------------------------
void vvImage::GetScalarRange(double* range)
{
- assert(mVtkImages.size());
- double * temp = mVtkImages[0]->GetScalarRange();
- range[0]=temp[0];
- range[1]=temp[1];
- for (unsigned int i=1; i<mVtkImages.size(); i++) {
- temp = mVtkImages[i]->GetScalarRange();
- if (temp[0] < range[0]) range[0]=temp[0];
- if (temp[1] > range[1]) range[1]=temp[1];
- }
+ range[0]=mrange[0];
+ range[1]=mrange[1];
}
//--------------------------------------------------------------------
{
unsigned long size = 0;
for (unsigned int i = 0; i < mVtkImages.size(); i++) {
- size += mVtkImages[i]->GetActualMemorySize();
+ size += mVtkImages[i]->GetActualMemorySize()*1024;
}
return size;
}
}
//--------------------------------------------------------------------
-//--------------------------------------------------------------------
-const std::vector<vtkImageData*>& vvImage::GetTransformedVTKImages()
-{
- return mTransformedVtkImages;
-}
-//--------------------------------------------------------------------
-
//--------------------------------------------------------------------
vtkImageData* vvImage::GetFirstVTKImageData()
{
return false;
}
}
-
//--------------------------------------------------------------------
//--------------------------------------------------------------------
-vtkSmartPointer<vtkTransform> vvImage::GetTransform()
+const std::vector< vtkSmartPointer<vtkTransform> >& vvImage::GetTransform()
{
return this->mTransform;
}
//--------------------------------------------------------------------
+
+//--------------------------------------------------------------------
+void vvImage::InitializeTransform()
+{
+ for (int i = 0; i < mTransform.size(); i++)
+ mTransform[i]->Identity();
+}
+//--------------------------------------------------------------------
+
+
+//--------------------------------------------------------------------
+std::vector< std::vector<double> > vvImage::GetDirection()
+{
+ int dim = this->GetNumberOfDimensions();
+ vtkSmartPointer<vtkTransform> transform = vtkSmartPointer<vtkTransform>::New();
+ transform->Identity();
+ for (int i = 0; i < mTransform.size(); i++)
+ transform->Concatenate(this->mTransform[i]);
+
+ vtkSmartPointer<vtkMatrix4x4> matrix = transform->GetMatrix();
+ matrix->Invert();
+ std::vector<std::vector<double> > direction0;
+ for (int i = 0; i < dim; i++) {
+ if (i != 3) {
+ std::vector<double> direction1;
+ for (int j = 0; j < dim; j++) {
+ if (j != 3)
+#if VTK_MAJOR_VERSION <= 6
+ direction1.push_back((*matrix)[i][j]);
+#else
+ direction1.push_back((*matrix).GetElement(i,j));
+#endif
+ }
+ direction0.push_back(direction1);
+ }
+ }
+ return direction0;
+}
+//--------------------------------------------------------------------
+
+
+
//--------------------------------------------------------------------
-void vvImage::UpdateReslice()
+bool vvImage::HaveSameSizeAndSpacingThan(vvImage * other)
{
- for (unsigned int i=0; i<mVtkImageReslice.size(); i++) {
- mVtkImageReslice[i]->Update();
+ bool same = true;
+ for(int i=0; i<GetNumberOfDimensions(); i++) {
+ if ( GetSize()[i] != other->GetSize()[i]) same = false;
+ if ( GetSpacing()[i] != other->GetSpacing()[i]) same = false;
}
+ return same;
}
//--------------------------------------------------------------------
+itk::MetaDataDictionary* vvImage::GetFirstMetaDataDictionary()
+{
+ return mDictionary[0];
+}
+//--------------------------------------------------------------------
+
#endif // VVIMAGE_CXX